FFCP PHASE1:Hg19::chr1:3528034..3528077,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:3528034..3528077,- to FFCP PHASE1:Hg19::chr1:3528034..3528077,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1953 | |EntrezGene=1953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3232 | |HGNC=3232 | ||
|TSSclassifier=strong | |||
|UniProt=O75095 | |UniProt=O75095 | ||
|association_with_transcript=0bp_to_ENST00000356575,NM_001409,uc001akl.2_5end | |||
|cluster_id=chr1:3528034..3528077,- | |||
|description=CAGE_peak_2_at_MEGF6_5end | |||
|id=chr1:3528034..3528077,- | |||
|ontology_enrichment_celltype=CL:0002139!9.35e-15!24;CL:0000213!5.09e-12!57;CL:0000215!5.09e-12!57;CL:0000071!9.34e-12!18;CL:0002546!9.34e-12!18;CL:0000115!3.16e-10!35;CL:0002078!9.97e-09!44;CL:0000076!4.01e-08!62 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.00e-13;24!CL:0000071;1.58e-10;18!CL:0000115;1.95e-08;36!CL:0002322;3.72e-08;5!CL:0002078;3.44e-07;45!CL:0000213;4.74e-07;58!CL:0000215;4.74e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000213,4.51e-15,58;CL:0000215,4.51e-15,58;CL:0002139,3.33e-13,24;CL:0000071,1.33e-10,18;CL:0002546,1.33e-10,18;CL:0000115,1.47e-10,36;CL:0002078,1.08e-09,45;CL:0000076,2.98e-09,63;CL:0002322,3.39e-08,5;CL:0000222,5.33e-07,121;CL:0000066,8.03e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;1.58e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!9.34e-12!18;UBERON:0004638!9.34e-12!18;UBERON:0004852!9.34e-12!18;UBERON:0006914!1.57e-11!25;UBERON:0000487!1.87e-11!22;UBERON:0000025!5.00e-10!194;UBERON:0004111!1.94e-09!241;UBERON:0000119!5.51e-09!312;UBERON:0002049!7.97e-09!79;UBERON:0007798!7.97e-09!79;UBERON:0000483!9.68e-09!309;UBERON:0000477!1.27e-08!286;UBERON:0000055!1.98e-08!69;UBERON:0003914!6.77e-08!118;UBERON:0007625!1.32e-07!11;UBERON:0001981!3.33e-07!60;UBERON:0007500!3.33e-07!60;UBERON:0004537!3.33e-07!60;UBERON:0006965!3.33e-07!60;UBERON:0002346!3.91e-07!90;UBERON:0004872!5.59e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;5.52e-13;11!UBERON:0004638;1.58e-10;18!UBERON:0001986;1.58e-10;18!UBERON:0004852;1.58e-10;18!UBERON:0000970;3.53e-10;20!UBERON:0000922;7.52e-10;49!UBERON:0000020;1.06e-09;23!UBERON:0002104;1.58e-09;21!UBERON:0000019;2.93e-09;19!UBERON:0000047;2.93e-09;19!UBERON:0004088;2.93e-09;19!UBERON:0010230;2.93e-09;19!UBERON:0001032;3.82e-09;24!UBERON:0004456;3.82e-09;24!UBERON:0001456;4.38e-08;21!UBERON:0006914;4.88e-08;25!UBERON:0000487;4.99e-08;22!UBERON:0000490;1.03e-07;33!UBERON:0000966;1.28e-07;5!UBERON:0005388;1.28e-07;5!UBERON:0001802;1.28e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,7.37e-13,11;UBERON:0004638,1.33e-10,18;UBERON:0001986,1.33e-10,18;UBERON:0004852,1.33e-10,18;UBERON:0002049,8.87e-10,78;UBERON:0007798,8.87e-10,78;UBERON:0000970,2.09e-09,21;UBERON:0002104,2.09e-09,21;UBERON:0000020,4.99e-09,24;UBERON:0001032,4.99e-09,24;UBERON:0004456,4.99e-09,24;UBERON:0000055,1.19e-08,68;UBERON:0000019,1.46e-08,20;UBERON:0000047,1.46e-08,20;UBERON:0010312,1.46e-08,20;UBERON:0004088,1.46e-08,20;UBERON:0010230,1.46e-08,20;UBERON:0003072,1.46e-08,20;UBERON:0004128,1.46e-08,20;UBERON:0003071,1.46e-08,20;UBERON:0000487,4.35e-08,22;UBERON:0006914,4.36e-08,25;UBERON:0001456,1.64e-07,22;UBERON:0007500,2.43e-07,59;UBERON:0001981,2.43e-07,59;UBERON:0004537,2.43e-07,59;UBERON:0006965,2.43e-07,59;UBERON:0004535,5.70e-07,109 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.491467873003018,2.09340350391728,0,0,0,0,0,0,0,0,0.984968464614303,3.67201244239655,0.940364164434263,0.572471974262113,0,0.125542639594803,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,12.6248188913984,0,0,0,0,0,0,0,0,0,0.464858073811369,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.25199300053181,2.80254281490768,5.53106578027662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,8.95037932904712,0.722878304769133,0,0.869079113764942,0,0,4.15953195521899,4.21285855178871,5.70926107005319,0.589405839739707,0,0,0,0,0,0,0,0,0.596287222100115,2.58070378531837,2.08284300964557,15.8286223738723,12.1654836500873,3.85165258716094,0.208994966536811,0.258416759169329,0.71153252537342,1.67360306382335,8.45941565929209,0.760272105718513,21.7215231217871,0.367663080345869,4.86085168729056,3.83988831621543,5.83776368828041,2.70267553159973,10.7321646226118,0.949265659568129,0.549605231791222,0,0,0,0,1.01304409331664,0.264818361626438,0.286836620748814,1.06400514659507,0.560677600142307,1.06748995729705,0.24666754841716,0.311211035399766,1.0776853765575,0.163461903113459,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70148274740032,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0.484938170456436,0,0,0,0,0,0,5.00092195131341,4.24095258628753,3.95059405756363,7.46359596110667,3.5324919122588,3.28479623168247,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,1.47008711385542,0,0,0.590789906681404,0,0.614942192715568,1.20097467208968,0,0,0,0,0,0,12.9898207822746,2.66639931442677,13.2671824486478,4.33099343283221,4.1668696131895,3.04406643575357,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.414656231081544,0,0,0.063497894292169,0,0,0,0,0,0,0.112131084345361,2.61576041299968,0,1.93907573636667,0,0,0,0,0,0,0,0,0,0,0,0,0,31.6511345912565,6.97226766880235,40.389088437551,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0.215627574859517,0,0,0,1.54657762555539,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0.702848489956279,0,0,0,0,0,0,0,0.686286847621712,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,2.53804844142407,0,0,0,0,0,0,0,0.784349769176855,0,0.211103257785751,2.27466768141793,0.340187410553031,0,0,0.270946437543853,1.50506932156456,0,0,0,0,0,4.10320200186223,24.2730837817782,2.27764876265012,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0.18532421910392,1.43124886741991,0,0,0.38126038784765,0,0,0,0,0,0,0,0.404364963146632,3.17020642346017,0,0,0,0,0,0,1.13008116620243,1.10273068709225,1.32687795048244,1.31535265576129,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.422215270595328,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,1.28188885352968,0,1.96032172784825,0,0,0,0,4.98948428582042,2.68107518185313,7.83192256078367,15.9064750734532,6.73913227472301,18.0305396436222,0.313359791546046,35.0888267926094,6.77167111206413,0,1.21079824314629,0,0,0,0.671028323677248,0.500547425135725,0,0,0,0,0.33307196799782,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0,0,4.01138275443188,1.19548792950642,1.38141957765574,0.503865495708552,0,0.123084805461069,0,0.988551862620595,0,0.511572370226872,0.0986434056369336,0,0,2.90799823828566,0.0927680981618513,0,0,0.0874599999961957,0,2.50345586228099,0.762760950878299,1.89110145414349,0.344743373241465,4.37406920074882,0,0,0.241192877250816,0,0,0.591095237907095,0.219385397153973,0,0,0.538651809526579,0,0,0.0897576444097721,0.108647371922008,0,0,0,0,0.941881538370149,0,0,0,0,0,0,0,0,3.1097675715467,0,1.99052386215701,0.884575645033392,3.66618086960175,0,0,0,0.943615861729479,3.21031058919516,0.234264445725339,0,0.19566461893209,0,0.394584402849391,2.41981432097328,1.53036380815245,0.252746318513952,0,0.103688191397247,0.664653872707185,0.330991955875499,0.941798755221676,4.77889719091835,16.507353669728,0,1.21491816834592,0.0979923974143777,0.0870592065804026,0.873633341210151,0,0,0,0,0.0969890164884194,0.0882561266915003,2.03382666702479,0,0,0.569797163602908,0.782205530939212,0,1.70762395791482,0.999048047910651,4.32271251462318,0.114536596165916,0,0,0,0,0,0,0,0,0,0.136905378891993,61.3183622721467,0,0,0.558564802544508,0,0.717873024576814,0.199679000498991,0.429226048136571,0,0.940568614814168,0,12.8145544480199,0.157566364614447,0.0824158583811665,0,0.0984274815147488,0,0,0.272406812223151,3.85807556316046,6.18927464687552,2.9080823662043,0,0,0.546746009922222,0,0.0788057072991982,1.46872846777995,0,0,0,0,0,0,0,0,0,0,0,0,0.453248366080503,0,0,0.129282956361551,0,0,1.40963004463334,2.56289790162467,8.17462386518263,4.97086866416635,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.372578417648301,0,0.499921631848426,0,0,0.235265819698172,0.468334905806882,7.39097245915208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,21.6586007288675,10.4397716786085,1.58694147858591,0,0,6.4471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| 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| ||
|short_description=p2@MEGF6 | |||
}} | }} |
Latest revision as of 17:57, 17 September 2015
Short description: | p2@MEGF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MEGF6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000356575, NM_001409, uc001akl.2_5end |
EntrezGene: | MEGF6 |
HGNC: | 3232 |
UniProt: | O75095 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lining cell | 4.51e-15 | 58 |
barrier cell | 4.51e-15 | 58 |
endothelial cell of vascular tree | 3.33e-13 | 24 |
blood vessel endothelial cell | 1.33e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.33e-10 | 18 |
endothelial cell | 1.47e-10 | 36 |
meso-epithelial cell | 1.08e-09 | 45 |
squamous epithelial cell | 2.98e-09 | 63 |
embryonic stem cell | 3.39e-08 | 5 |
mesodermal cell | 5.33e-07 | 121 |
epithelial cell | 8.03e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
pigment epithelium of eye | 7.37e-13 | 11 |
blood vessel endothelium | 1.33e-10 | 18 |
endothelium | 1.33e-10 | 18 |
cardiovascular system endothelium | 1.33e-10 | 18 |
vasculature | 8.87e-10 | 78 |
vascular system | 8.87e-10 | 78 |
eye | 2.09e-09 | 21 |
visual system | 2.09e-09 | 21 |
sense organ | 4.99e-09 | 24 |
sensory system | 4.99e-09 | 24 |
entire sense organ system | 4.99e-09 | 24 |
vessel | 1.19e-08 | 68 |
camera-type eye | 1.46e-08 | 20 |
simple eye | 1.46e-08 | 20 |
immature eye | 1.46e-08 | 20 |
ocular region | 1.46e-08 | 20 |
eyeball of camera-type eye | 1.46e-08 | 20 |
optic cup | 1.46e-08 | 20 |
optic vesicle | 1.46e-08 | 20 |
eye primordium | 1.46e-08 | 20 |
simple squamous epithelium | 4.35e-08 | 22 |
squamous epithelium | 4.36e-08 | 25 |
face | 1.64e-07 | 22 |
epithelial tube open at both ends | 2.43e-07 | 59 |
blood vessel | 2.43e-07 | 59 |
blood vasculature | 2.43e-07 | 59 |
vascular cord | 2.43e-07 | 59 |
cardiovascular system | 5.70e-07 | 109 |