FFCP PHASE1:Hg19::chr13:51483942..51483963,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr13:51483942..51483963,+
|short_description=p4@RNASEH2B
|description=CAGE_peak_4_at_RNASEH2B_5end
|association_with_transcript=3bp_to_ENST00000459983_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79621 | |EntrezGene=79621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25671 | |HGNC=25671 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=3bp_to_ENST00000459983_5end | |||
|cluster_id=chr13:51483942..51483963,+ | |||
|description=CAGE_peak_4_at_RNASEH2B_5end | |||
|id=chr13:51483942..51483963,+ | |||
|ontology_enrichment_celltype=CL:0000988!3.76e-17!182;CL:0000037!3.83e-16!172;CL:0000566!3.83e-16!172;CL:0002032!1.34e-14!165;CL:0000837!1.34e-14!165;CL:0000542!5.39e-10!53;CL:0000051!5.39e-10!53;CL:0000838!1.40e-09!52;CL:0002031!5.79e-08!124;CL:0002087!6.43e-08!119;CL:0000236!7.60e-08!14;CL:0000945!8.28e-08!24;CL:0000826!8.28e-08!24;CL:0000738!8.82e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.39e-09;13!CL:0000945;6.91e-08;24!CL:0000542;5.14e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.41e-19,177;CL:0000037,3.20e-18,168;CL:0002032,1.53e-16,161;CL:0000837,1.53e-16,161;CL:0000542,3.00e-09,53;CL:0000051,3.00e-09,53;CL:0000838,8.26e-09,52;CL:0000738,2.55e-08,136;CL:0000236,2.58e-08,14;CL:0000763,3.02e-08,108;CL:0000049,3.02e-08,108;CL:0002031,4.43e-08,120;CL:0000945,5.14e-08,24;CL:0000826,5.14e-08,24;CL:0002087,6.05e-08,115 | |||
|ontology_enrichment_development_v019=CL:0000051;5.14e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!6.24e-18!51;DOID:0060083!6.24e-18!51;DOID:1240!2.73e-14!39;DOID:8692!5.18e-12!31;DOID:14566!2.72e-08!239;DOID:162!2.75e-08!235;DOID:0050686!7.88e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.22e-14;31!DOID:1240;1.92e-13;39!DOID:2531;4.02e-12;51!DOID:0060083;4.02e-12;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.13e-21,51;DOID:0060083,8.13e-21,51;DOID:1240,1.55e-16,39;DOID:8692,2.70e-14,31;DOID:14566,2.19e-07,239;DOID:162,3.29e-07,235;DOID:0050686,9.94e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p4@RNASEH2B | |||
}} | }} |
Latest revision as of 18:12, 17 September 2015
Short description: | p4@RNASEH2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNASEH2B_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000459983_5end |
EntrezGene: | RNASEH2B |
HGNC: | 25671 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.41e-19 | 177 |
hematopoietic stem cell | 3.20e-18 | 168 |
hematopoietic oligopotent progenitor cell | 1.53e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.53e-16 | 161 |
lymphocyte | 3.00e-09 | 53 |
common lymphoid progenitor | 3.00e-09 | 53 |
lymphoid lineage restricted progenitor cell | 8.26e-09 | 52 |
leukocyte | 2.55e-08 | 136 |
B cell | 2.58e-08 | 14 |
myeloid cell | 3.02e-08 | 108 |
common myeloid progenitor | 3.02e-08 | 108 |
hematopoietic lineage restricted progenitor cell | 4.43e-08 | 120 |
lymphocyte of B lineage | 5.14e-08 | 24 |
pro-B cell | 5.14e-08 | 24 |
nongranular leukocyte | 6.05e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.13e-21 | 51 |
immune system cancer | 8.13e-21 | 51 |
leukemia | 1.55e-16 | 39 |
myeloid leukemia | 2.70e-14 | 31 |
disease of cellular proliferation | 2.19e-07 | 239 |
cancer | 3.29e-07 | 235 |
organ system cancer | 9.94e-07 | 137 |