FFCP PHASE1:Hg19::chr5:35195764..35195792,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5618 | |EntrezGene=5618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9446 | |HGNC=9446 | ||
|TSSclassifier=strong | |||
|UniProt=D6RD41 | |UniProt=D6RD41 | ||
|association_with_transcript=-420bp_to_ENST00000509839_5end | |association_with_transcript=-420bp_to_ENST00000509839_5end | ||
|cluster_id=chr5:35195764..35195792,- | |||
|coexpression_cluster_id=C25 | |coexpression_cluster_id=C25 | ||
|description=CAGE_peak_3_at_PRLR_5end | |description=CAGE_peak_3_at_PRLR_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.64e-07;2!UBERON:0007297;1.81e-07;2 | |ontology_enrichment_development_v019=UBERON:0010122;1.64e-07;2!UBERON:0007297;1.81e-07;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!3.34e-23!11;UBERON:0000369!3.30e-22!4;UBERON:0002435!3.30e-22!4;UBERON:0000204!3.30e-22!4;UBERON:0010082!3.30e-22!4;UBERON:0000160!1.77e-21!27;UBERON:0004907!3.72e-17!5;UBERON:0005383!4.20e-17!3;UBERON:0005382!4.20e-17!3;UBERON:0005409!3.19e-16!35;UBERON:0001155!6.57e-15!9;UBERON:0009663!9.36e-13!7;UBERON:0001052!1.60e-12!4;UBERON:0001894!4.16e-12!7;UBERON:0006222!4.16e-12!7;UBERON:0001873!5.82e-12!2;UBERON:0010122!5.82e-12!2;UBERON:0000007!1.54e-11!2;UBERON:0002308!6.10e-10!9;UBERON:0002420!6.10e-10!9;UBERON:0000125!6.10e-10!9;UBERON:0007245!6.10e-10!9;UBERON:0010009!6.10e-10!9;UBERON:0010011!6.10e-10!9;UBERON:0000454!6.10e-10!9;UBERON:0002780!8.18e-09!41;UBERON:0001890!8.18e-09!41;UBERON:0006240!8.18e-09!41;UBERON:0003080!1.42e-08!42;UBERON:0007023!1.63e-08!115;UBERON:0006947!3.68e-08!3;UBERON:0004054!3.68e-08!3;UBERON:0001301!7.19e-07!1;UBERON:0001874!7.60e-07!1;UBERON:0001882!8.03e-07!1;UBERON:0005403!8.03e-07!1;UBERON:0001046!9.64e-07!19 | |ontology_enrichment_uberon=UBERON:0000059!3.34e-23!11;UBERON:0000369!3.30e-22!4;UBERON:0002435!3.30e-22!4;UBERON:0000204!3.30e-22!4;UBERON:0010082!3.30e-22!4;UBERON:0000160!1.77e-21!27;UBERON:0004907!3.72e-17!5;UBERON:0005383!4.20e-17!3;UBERON:0005382!4.20e-17!3;UBERON:0005409!3.19e-16!35;UBERON:0001155!6.57e-15!9;UBERON:0009663!9.36e-13!7;UBERON:0001052!1.60e-12!4;UBERON:0001894!4.16e-12!7;UBERON:0006222!4.16e-12!7;UBERON:0001873!5.82e-12!2;UBERON:0010122!5.82e-12!2;UBERON:0000007!1.54e-11!2;UBERON:0002308!6.10e-10!9;UBERON:0002420!6.10e-10!9;UBERON:0000125!6.10e-10!9;UBERON:0007245!6.10e-10!9;UBERON:0010009!6.10e-10!9;UBERON:0010011!6.10e-10!9;UBERON:0000454!6.10e-10!9;UBERON:0002780!8.18e-09!41;UBERON:0001890!8.18e-09!41;UBERON:0006240!8.18e-09!41;UBERON:0003080!1.42e-08!42;UBERON:0007023!1.63e-08!115;UBERON:0006947!3.68e-08!3;UBERON:0004054!3.68e-08!3;UBERON:0001301!7.19e-07!1;UBERON:0001874!7.60e-07!1;UBERON:0001882!8.03e-07!1;UBERON:0005403!8.03e-07!1;UBERON:0001046!9.64e-07!19 | ||
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|short_description=p3@PRLR | |short_description=p3@PRLR | ||
}} | }} |
Latest revision as of 18:13, 17 September 2015
Short description: | p3@PRLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRLR_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -420bp_to_ENST00000509839_5end |
EntrezGene: | PRLR |
HGNC: | 9446 |
UniProt: | D6RD41 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 2.79e-33 | 17 |
corpus striatum | 3.49e-28 | 4 |
striatum | 3.49e-28 | 4 |
ventral part of telencephalon | 3.49e-28 | 4 |
future corpus striatum | 3.49e-28 | 4 |
small intestine | 1.76e-23 | 4 |
gastrointestinal system | 6.58e-23 | 25 |
large intestine | 3.58e-18 | 11 |
caudate-putamen | 2.11e-17 | 3 |
dorsal striatum | 2.11e-17 | 3 |
telencephalic nucleus | 2.07e-16 | 7 |
epididymis | 1.10e-13 | 1 |
putamen | 1.25e-13 | 1 |
nucleus accumbens | 1.42e-13 | 1 |
ventral striatum | 1.42e-13 | 1 |
colon | 5.20e-13 | 9 |
basal ganglion | 6.65e-13 | 9 |
neural nucleus | 6.65e-13 | 9 |
nuclear complex of neuraxis | 6.65e-13 | 9 |
nucleus of brain | 6.65e-13 | 9 |
aggregate regional part of brain | 6.65e-13 | 9 |
collection of basal ganglia | 6.65e-13 | 9 |
cerebral subcortex | 6.65e-13 | 9 |
caudate nucleus | 1.64e-07 | 2 |
future caudate nucleus | 1.64e-07 | 2 |