FFCP PHASE1:Hg19::chr2:161056598..161056605,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3694 | |EntrezGene=3694 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6161 | |HGNC=6161 | ||
|TSSclassifier=strong | |||
|UniProt=P18564 | |UniProt=P18564 | ||
|association_with_transcript=-8bp_to_NM_000888_5end | |association_with_transcript=-8bp_to_NM_000888_5end | ||
|cluster_id=chr2:161056598..161056605,- | |||
|description=CAGE_peak_12_at_ITGB6_5end | |description=CAGE_peak_12_at_ITGB6_5end | ||
|id=chr2:161056598..161056605,- | |id=chr2:161056598..161056605,- | ||
|ontology_enrichment_celltype=CL:0002166!1.90e-13!3;CL:0000066!2.57e-13!254;CL:0002076!4.88e-13!43;CL:0002159!6.00e-11!13;CL:0000223!9.69e-09!59 | |ontology_enrichment_celltype=CL:0002166!1.90e-13!3;CL:0000066!2.57e-13!254;CL:0002076!4.88e-13!43;CL:0002159!6.00e-11!13;CL:0000223!9.69e-09!59 | ||
|ontology_enrichment_celltype_v019=CL:0002536;2.05e-15;2!CL:0002577;6.73e-11;3!CL:0002166;9.90e-11;3!CL:0002231;9.90e-11;3!CL:0000349;5.83e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002536,2.74e-15,2;CL:0002577,6.73e-11,3;CL:0002166,8.17e-11,3;CL:0002231,8.99e-11,3;CL:0000349,6.19e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4929;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4929,2.05e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0005631!1.65e-13!14;UBERON:0000158!1.65e-13!14;UBERON:0001708!3.43e-10!4;UBERON:0001704!3.43e-10!4;UBERON:0001987!7.54e-10!4;UBERON:0004340!7.54e-10!4;UBERON:0004119!1.79e-09!169;UBERON:0000925!1.79e-09!169;UBERON:0006595!1.79e-09!169;UBERON:0003124!1.90e-09!7;UBERON:0001255!2.09e-08!2;UBERON:0001556!2.09e-08!2;UBERON:0005911!1.59e-07!82;UBERON:0000478!1.86e-07!24;UBERON:0005153!3.52e-07!37;UBERON:0006554!5.04e-07!44;UBERON:0002090!6.45e-07!6;UBERON:0001008!7.92e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0004913;2.37e-29;1!UBERON:0003703;2.37e-29;1!UBERON:0001174;2.37e-29;1!UBERON:0004914;2.37e-29;1!UBERON:0002114;9.90e-11;2!UBERON:0001987;1.70e-08;4!UBERON:0002394;2.26e-08;4!UBERON:0001708;2.26e-08;4!UBERON:0003928;2.26e-08;4!UBERON:0008895;2.26e-08;4!UBERON:0002108;6.04e-07;4!UBERON:0011159;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004913,2.37e-29,1;UBERON:0003703,2.37e-29,1;UBERON:0001174,2.37e-29,1;UBERON:0004914,2.37e-29,1;UBERON:0002114,9.90e-11,2;UBERON:0005631,4.38e-09,14;UBERON:0000158,4.38e-09,14;UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4;UBERON:0001708,1.96e-08,4;UBERON:0008895,1.96e-08,4;UBERON:0011159,5.38e-07,5;UBERON:0002108,6.04e-07,4 | |||
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| ||
|short_description=p12@ITGB6 | |short_description=p12@ITGB6 | ||
}} | }} |
Latest revision as of 19:42, 17 September 2015
Short description: | p12@ITGB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ITGB6_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_NM_000888_5end |
EntrezGene: | ITGB6 |
HGNC: | 6161 |
UniProt: | P18564 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 2.74e-15 | 2 |
placental epithelial cell | 6.73e-11 | 3 |
epithelial cell of Malassez | 8.17e-11 | 3 |
epithelial cell of prostate | 8.99e-11 | 3 |
extraembryonic cell | 6.19e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hepatopancreatic ampulla | 2.37e-29 | 1 |
extrahepatic bile duct | 2.37e-29 | 1 |
common bile duct | 2.37e-29 | 1 |
duodenal papilla | 2.37e-29 | 1 |
duodenum | 9.90e-11 | 2 |
extraembryonic membrane | 4.38e-09 | 14 |
membranous layer | 4.38e-09 | 14 |
placenta | 1.70e-08 | 4 |
allantois | 1.70e-08 | 4 |
jaw skeleton | 1.96e-08 | 4 |
splanchnocranium | 1.96e-08 | 4 |
primary subdivision of cranial skeletal system | 5.38e-07 | 5 |
small intestine | 6.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
tubular adenocarcinoma | 2.05e-15 | 2 |