FFCP PHASE1:Hg19::chr13:53602936..53602955,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10562 | |EntrezGene=10562 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17190 | |HGNC=17190 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-16bp_to_uc001vhk.1,uc001vhl.2_5end | |association_with_transcript=-16bp_to_uc001vhk.1,uc001vhl.2_5end | ||
|cluster_id=chr13:53602936..53602955,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_OLFM4_5end | |description=CAGE_peak_1_at_OLFM4_5end | ||
|id=chr13:53602936..53602955,+ | |id=chr13:53602936..53602955,+ | ||
|ontology_enrichment_celltype=CL:0000094!9.97e-10!8 | |ontology_enrichment_celltype=CL:0000094!9.97e-10!8 | ||
|ontology_enrichment_celltype_v019=CL:0000094;8.84e-13;8!CL:0000081;4.25e-09;11!CL:0000771;6.97e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,7.87e-13,8;CL:0000081,3.91e-09,11;CL:0000771,6.77e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006603;4.37e-09;65!UBERON:0004872;3.98e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.02e-56!115;UBERON:0000178!2.28e-11!15;UBERON:0000179!2.28e-11!15;UBERON:0000463!2.28e-11!15;UBERON:0001049!7.72e-09!57;UBERON:0005068!7.72e-09!57;UBERON:0006241!7.72e-09!57;UBERON:0007135!7.72e-09!57;UBERON:0002619!2.63e-08!22;UBERON:0001950!5.81e-08!20;UBERON:0003080!1.44e-07!42;UBERON:0002616!2.03e-07!59;UBERON:0002791!2.31e-07!33;UBERON:0001893!4.84e-07!34;UBERON:0000956!5.56e-07!25;UBERON:0000203!5.56e-07!25;UBERON:0002020!6.57e-07!34;UBERON:0003528!6.57e-07!34;UBERON:0002780!8.51e-07!41;UBERON:0001890!8.51e-07!41;UBERON:0006240!8.51e-07!41 | |ontology_enrichment_uberon=UBERON:0007023!2.02e-56!115;UBERON:0000178!2.28e-11!15;UBERON:0000179!2.28e-11!15;UBERON:0000463!2.28e-11!15;UBERON:0001049!7.72e-09!57;UBERON:0005068!7.72e-09!57;UBERON:0006241!7.72e-09!57;UBERON:0007135!7.72e-09!57;UBERON:0002619!2.63e-08!22;UBERON:0001950!5.81e-08!20;UBERON:0003080!1.44e-07!42;UBERON:0002616!2.03e-07!59;UBERON:0002791!2.31e-07!33;UBERON:0001893!4.84e-07!34;UBERON:0000956!5.56e-07!25;UBERON:0000203!5.56e-07!25;UBERON:0002020!6.57e-07!34;UBERON:0003528!6.57e-07!34;UBERON:0002780!8.51e-07!41;UBERON:0001890!8.51e-07!41;UBERON:0006240!8.51e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;2.69e-11;33!UBERON:0000160;2.05e-10;17!UBERON:0004177;4.73e-10;5!UBERON:0005057;4.73e-10;5!UBERON:0005409;7.37e-10;22!UBERON:0000077;4.02e-09;27!UBERON:0002075;2.91e-07;18!UBERON:0000059;3.43e-07;11!UBERON:0002370;5.41e-07;2!UBERON:0005058;5.41e-07;2!UBERON:0009113;5.41e-07;2!UBERON:0000922;6.12e-07;49!UBERON:0001255;6.97e-07;2!UBERON:0001556;6.97e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.34e-25,114;UBERON:0005409,9.60e-13,25;UBERON:0004921,1.78e-10,118;UBERON:0000160,2.05e-10,17;UBERON:0001007,5.76e-09,145;UBERON:0001555,5.76e-09,145;UBERON:0007026,5.76e-09,145;UBERON:0000077,2.37e-08,29;UBERON:0004119,2.94e-08,160;UBERON:0000925,2.94e-08,160;UBERON:0006595,2.94e-08,160;UBERON:0002075,3.10e-07,18;UBERON:0000059,3.43e-07,11;UBERON:0004177,3.70e-07,7;UBERON:0005057,3.70e-07,7;UBERON:0001046,6.32e-07,19;UBERON:0001255,6.97e-07,2;UBERON:0001556,6.97e-07,2 | |||
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| ||
|short_description=p1@OLFM4 | |short_description=p1@OLFM4 | ||
}} | }} |
Latest revision as of 19:56, 17 September 2015
Short description: | p1@OLFM4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_OLFM4_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -16bp_to_uc001vhk.1, uc001vhl.2_5end |
EntrezGene: | OLFM4 |
HGNC: | 17190 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 7.87e-13 | 8 |
blood cell | 3.91e-09 | 11 |
eosinophil | 6.77e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.34e-25 | 114 |
gastrointestinal system | 9.60e-13 | 25 |
subdivision of digestive tract | 1.78e-10 | 118 |
intestine | 2.05e-10 | 17 |
digestive system | 5.76e-09 | 145 |
digestive tract | 5.76e-09 | 145 |
primitive gut | 5.76e-09 | 145 |
mixed endoderm/mesoderm-derived structure | 2.37e-08 | 29 |
endoderm-derived structure | 2.94e-08 | 160 |
endoderm | 2.94e-08 | 160 |
presumptive endoderm | 2.94e-08 | 160 |
viscus | 3.10e-07 | 18 |
large intestine | 3.43e-07 | 11 |
hemopoietic organ | 3.70e-07 | 7 |
immune organ | 3.70e-07 | 7 |
hindgut | 6.32e-07 | 19 |
urinary bladder | 6.97e-07 | 2 |
lower urinary tract | 6.97e-07 | 2 |