FFCP PHASE1:Hg19::chr4:42154660..42154682,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389206 | |EntrezGene=389206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23815 | |HGNC=23815 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZU67 | |UniProt=Q6ZU67 | ||
|association_with_transcript=212bp_to_ENST00000502486,ENST00000504360,NM_001159547,NM_207406,uc003gwm.2,uc003gwn.2_5end | |association_with_transcript=212bp_to_ENST00000502486,ENST00000504360,NM_001159547,NM_207406,uc003gwm.2,uc003gwn.2_5end | ||
|cluster_id=chr4:42154660..42154682,- | |||
|description=CAGE_peak_5_at_BEND4_5end | |description=CAGE_peak_5_at_BEND4_5end | ||
|id=chr4:42154660..42154682,- | |id=chr4:42154660..42154682,- | ||
|ontology_enrichment_celltype=CL:0000945!2.13e-09!24;CL:0000826!2.13e-09!24;CL:0000236!3.92e-09!14;CL:0002322!4.96e-07!5;CL:0002319!7.41e-07!25 | |ontology_enrichment_celltype=CL:0000945!2.13e-09!24;CL:0000826!2.13e-09!24;CL:0000236!3.92e-09!14;CL:0002322!4.96e-07!5;CL:0002319!7.41e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000236;6.23e-24;13!CL:0000945;2.79e-16;24!CL:0000817;3.80e-08;1!CL:0002032;1.18e-07;1!CL:0000557;1.18e-07;1 | |ontology_enrichment_celltype_v019=CL:0000236;6.23e-24;13!CL:0000945;2.79e-16;24!CL:0000817;3.80e-08;1!CL:0002032;1.18e-07;1!CL:0000557;1.18e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.25e-22,14;CL:0000945,1.73e-16,24;CL:0000826,1.73e-16,24;CL:0000838,8.29e-09,52;CL:0000542,1.29e-08,53;CL:0000051,1.29e-08,53;CL:0002032,4.03e-07,161;CL:0000837,4.03e-07,161 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1240;2.79e-08;39!DOID:3347;1.18e-07;1!DOID:8692;9.36e-07;31 | |ontology_enrichment_disease_v019=DOID:1240;2.79e-08;39!DOID:3347;1.18e-07;1!DOID:8692;9.36e-07;31 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,1.23e-09,39;DOID:2531,5.61e-09,51;DOID:0060083,5.61e-09,51;DOID:3347,1.26e-07,1;DOID:8692,4.05e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0001017!1.96e-11!82;UBERON:0000073!2.01e-11!94;UBERON:0001016!2.01e-11!94;UBERON:0005743!4.58e-11!86;UBERON:0002780!2.05e-10!41;UBERON:0001890!2.05e-10!41;UBERON:0006240!2.05e-10!41;UBERON:0002020!2.50e-10!34;UBERON:0003528!2.50e-10!34;UBERON:0001893!3.60e-10!34;UBERON:0001869!4.68e-10!32;UBERON:0003080!5.17e-10!42;UBERON:0000955!8.12e-10!69;UBERON:0006238!8.12e-10!69;UBERON:0007023!1.27e-09!115;UBERON:0001049!1.43e-09!57;UBERON:0005068!1.43e-09!57;UBERON:0006241!1.43e-09!57;UBERON:0007135!1.43e-09!57;UBERON:0002791!1.87e-09!33;UBERON:0000956!4.84e-09!25;UBERON:0000203!4.84e-09!25;UBERON:0002616!3.15e-08!59;UBERON:0003056!1.60e-07!61 | |ontology_enrichment_uberon=UBERON:0001017!1.96e-11!82;UBERON:0000073!2.01e-11!94;UBERON:0001016!2.01e-11!94;UBERON:0005743!4.58e-11!86;UBERON:0002780!2.05e-10!41;UBERON:0001890!2.05e-10!41;UBERON:0006240!2.05e-10!41;UBERON:0002020!2.50e-10!34;UBERON:0003528!2.50e-10!34;UBERON:0001893!3.60e-10!34;UBERON:0001869!4.68e-10!32;UBERON:0003080!5.17e-10!42;UBERON:0000955!8.12e-10!69;UBERON:0006238!8.12e-10!69;UBERON:0007023!1.27e-09!115;UBERON:0001049!1.43e-09!57;UBERON:0005068!1.43e-09!57;UBERON:0006241!1.43e-09!57;UBERON:0007135!1.43e-09!57;UBERON:0002791!1.87e-09!33;UBERON:0000956!4.84e-09!25;UBERON:0000203!4.84e-09!25;UBERON:0002616!3.15e-08!59;UBERON:0003056!1.60e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.27e-13;2!UBERON:0005058;1.27e-13;2!UBERON:0009113;1.27e-13;2!UBERON:0000473;5.49e-08;8 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.27e-13;2!UBERON:0005058;1.27e-13;2!UBERON:0009113;1.27e-13;2!UBERON:0000473;5.49e-08;8 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.19e-08,8;UBERON:0002370,4.42e-07,4;UBERON:0005058,4.42e-07,4;UBERON:0009113,4.42e-07,4;UBERON:0003295,4.42e-07,4;UBERON:0005562,4.42e-07,4 | |||
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| ||
|short_description=p5@BEND4 | |short_description=p5@BEND4 | ||
}} | }} |
Latest revision as of 20:11, 17 September 2015
Short description: | p5@BEND4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BEND4_5end |
Coexpression cluster: | NA |
Association with transcript: | 212bp_to_ENST00000502486, ENST00000504360, NM_001159547, NM_207406, uc003gwm.2, uc003gwn.2_5end |
EntrezGene: | BEND4 |
HGNC: | 23815 |
UniProt: | Q6ZU67 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.25e-22 | 14 |
lymphocyte of B lineage | 1.73e-16 | 24 |
pro-B cell | 1.73e-16 | 24 |
lymphoid lineage restricted progenitor cell | 8.29e-09 | 52 |
lymphocyte | 1.29e-08 | 53 |
common lymphoid progenitor | 1.29e-08 | 53 |
hematopoietic oligopotent progenitor cell | 4.03e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.03e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
testis | 6.19e-08 | 8 |
thymus | 4.42e-07 | 4 |
hemolymphoid system gland | 4.42e-07 | 4 |
thymic region | 4.42e-07 | 4 |
pharyngeal gland | 4.42e-07 | 4 |
thymus primordium | 4.42e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.23e-09 | 39 |
hematologic cancer | 5.61e-09 | 51 |
immune system cancer | 5.61e-09 | 51 |
osteosarcoma | 1.26e-07 | 1 |
myeloid leukemia | 4.05e-07 | 31 |