FFCP PHASE1:Hg19::chr1:158224523..158224534,+: Difference between revisions
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|id=chr1:158224523..158224534,+
|short_description=p12@CD1A
|description=CAGE_peak_12_at_CD1A_5end
|association_with_transcript=-339bp_to_DQ891346,DQ894526_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=909 | |EntrezGene=909 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1634 | |HGNC=1634 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-339bp_to_DQ891346,DQ894526_5end | |||
|cluster_id=chr1:158224523..158224534,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_12_at_CD1A_5end | |||
|id=chr1:158224523..158224534,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.18e-26;2!UBERON:0004872;2.35e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!5.57e-37!7;UBERON:0002370!1.78e-29!4;UBERON:0005058!1.78e-29!4;UBERON:0009113!1.78e-29!4;UBERON:0003295!1.78e-29!4;UBERON:0005562!1.78e-29!4;UBERON:0000974!3.03e-26!10;UBERON:0003351!4.86e-20!6;UBERON:0000341!2.05e-15!2;UBERON:0003408!1.89e-12!10;UBERON:0001042!1.89e-12!10;UBERON:0009145!1.89e-12!10;UBERON:0006562!2.07e-11!11;UBERON:0009722!2.07e-11!11;UBERON:0007690!2.07e-11!11;UBERON:0002106!1.20e-10!3;UBERON:0004854!1.20e-10!3;UBERON:0009034!1.20e-10!3;UBERON:0002095!1.20e-10!3;UBERON:0004782!1.20e-10!3;UBERON:0003281!1.20e-10!3;UBERON:0009664!1.20e-10!3;UBERON:0002296!1.20e-10!3;UBERON:0005602!1.20e-10!3;UBERON:0001179!1.20e-10!3;UBERON:0006293!1.20e-10!3;UBERON:0005057!1.50e-10!26;UBERON:0008814!1.27e-08!15;UBERON:0001557!5.34e-07!19;UBERON:0000013!6.39e-07!5;UBERON:0002410!6.39e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.68e-99;2!UBERON:0005058;5.68e-99;2!UBERON:0009113;5.68e-99;2!UBERON:0004177;1.81e-40;5!UBERON:0005057;1.81e-40;5!UBERON:0000077;1.98e-08;27!UBERON:0002405;1.98e-08;27!UBERON:0001638;8.85e-07;9!UBERON:0003920;8.85e-07;9!UBERON:0004582;8.85e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.11e-50,4;UBERON:0005058,3.11e-50,4;UBERON:0009113,3.11e-50,4;UBERON:0003295,3.11e-50,4;UBERON:0005562,3.11e-50,4;UBERON:0003351,5.98e-34,6;UBERON:0004177,2.74e-29,7;UBERON:0005057,2.74e-29,7;UBERON:0000974,6.99e-21,10;UBERON:0003408,6.99e-21,10;UBERON:0001042,6.99e-21,10;UBERON:0009145,6.99e-21,10;UBERON:0006562,4.28e-19,11;UBERON:0009722,4.28e-19,11;UBERON:0007690,4.28e-19,11;UBERON:0008814,4.07e-12,18;UBERON:0001557,1.55e-11,19;UBERON:0004807,3.65e-08,28;UBERON:0000077,6.44e-08,29;UBERON:0001638,8.85e-07,9;UBERON:0003920,8.85e-07,9;UBERON:0004582,8.85e-07,9;UBERON:0002368,9.98e-07,35 | |||
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|short_description=p12@CD1A | |||
}} | }} |
Latest revision as of 20:14, 17 September 2015
Short description: | p12@CD1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CD1A_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -339bp_to_DQ891346, DQ894526_5end |
EntrezGene: | CD1A |
HGNC: | 1634 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 3.11e-50 | 4 |
hemolymphoid system gland | 3.11e-50 | 4 |
thymic region | 3.11e-50 | 4 |
pharyngeal gland | 3.11e-50 | 4 |
thymus primordium | 3.11e-50 | 4 |
pharyngeal epithelium | 5.98e-34 | 6 |
hemopoietic organ | 2.74e-29 | 7 |
immune organ | 2.74e-29 | 7 |
neck | 6.99e-21 | 10 |
gland of gut | 6.99e-21 | 10 |
chordate pharynx | 6.99e-21 | 10 |
pharyngeal region of foregut | 6.99e-21 | 10 |
pharynx | 4.28e-19 | 11 |
entire pharyngeal arch endoderm | 4.28e-19 | 11 |
early pharyngeal endoderm | 4.28e-19 | 11 |
pharyngeal arch system | 4.07e-12 | 18 |
upper respiratory tract | 1.55e-11 | 19 |
respiratory system epithelium | 3.65e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.44e-08 | 29 |
vein | 8.85e-07 | 9 |
venous blood vessel | 8.85e-07 | 9 |
venous system | 8.85e-07 | 9 |
endocrine gland | 9.98e-07 | 35 |