Personal tools

FFCP PHASE1:Hg19::chr17:76274572..76274581,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=
|EntrezGene=
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA
|HGNC=
|HGNC=
|TSSclassifier=strong
|UniProt=Q6ZR66
|UniProt=Q6ZR66
|association_with_transcript=0bp_to_ENST00000374945_5end
|association_with_transcript=0bp_to_ENST00000374945_5end
|cluster_id=chr17:76274572..76274581,-
|coexpression_cluster_id=C28
|coexpression_cluster_id=C28
|description=CAGE_peak_4_at_ENST00000374945_5end
|description=CAGE_peak_4_at_ENST00000374945_5end
Line 9: Line 14:
|ontology_enrichment_celltype=CL:0002322!9.95e-09!5
|ontology_enrichment_celltype=CL:0002322!9.95e-09!5
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:0060058!1.58e-09!10
|ontology_enrichment_disease=DOID:0060058!1.58e-09!10
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000341!5.20e-21!2;UBERON:0000974!1.42e-16!10;UBERON:0005418!1.06e-11!1;UBERON:0001389!1.06e-11!1;UBERON:0000026!1.06e-11!1;UBERON:0008784!1.06e-11!1;UBERON:0006058!1.06e-11!1;UBERON:0003663!1.06e-11!1;UBERON:0001383!1.06e-11!1;UBERON:0004256!1.06e-11!1;UBERON:0002529!1.06e-11!1;UBERON:0004708!1.06e-11!1;UBERON:0002101!1.06e-11!1;UBERON:0004709!1.06e-11!1;UBERON:0003661!1.06e-11!1;UBERON:0002471!1.06e-11!1;UBERON:0004357!1.06e-11!1;UBERON:0009872!1.06e-11!1;UBERON:0004347!1.06e-11!1;UBERON:0005420!1.06e-11!1;UBERON:0005732!1.06e-11!1;UBERON:0006057!1.06e-11!1;UBERON:0000978!1.06e-11!1;UBERON:0002103!1.06e-11!1;UBERON:0001665!1.06e-11!1;UBERON:0003823!1.06e-11!1;UBERON:0000154!1.06e-11!1;UBERON:0005733!1.06e-11!1;UBERON:0005730!1.06e-11!1;UBERON:0002171!1.31e-11!1;UBERON:0006518!1.31e-11!1;UBERON:0008949!1.31e-11!1;UBERON:0000101!1.31e-11!1;UBERON:0002167!1.31e-11!1;UBERON:0002370!2.30e-11!4;UBERON:0005058!2.30e-11!4;UBERON:0009113!2.30e-11!4;UBERON:0003295!2.30e-11!4;UBERON:0005562!2.30e-11!4;UBERON:0002372!6.00e-11!1;UBERON:0001961!6.00e-11!1;UBERON:0001744!6.00e-11!1;UBERON:0001735!6.00e-11!1;UBERON:0001042!1.08e-09!10;UBERON:0009145!1.08e-09!10;UBERON:0006562!7.37e-09!11;UBERON:0003351!7.32e-08!6;UBERON:0004177!7.46e-07!7
|ontology_enrichment_uberon=UBERON:0000341!5.20e-21!2;UBERON:0000974!1.42e-16!10;UBERON:0005418!1.06e-11!1;UBERON:0001389!1.06e-11!1;UBERON:0000026!1.06e-11!1;UBERON:0008784!1.06e-11!1;UBERON:0006058!1.06e-11!1;UBERON:0003663!1.06e-11!1;UBERON:0001383!1.06e-11!1;UBERON:0004256!1.06e-11!1;UBERON:0002529!1.06e-11!1;UBERON:0004708!1.06e-11!1;UBERON:0002101!1.06e-11!1;UBERON:0004709!1.06e-11!1;UBERON:0003661!1.06e-11!1;UBERON:0002471!1.06e-11!1;UBERON:0004357!1.06e-11!1;UBERON:0009872!1.06e-11!1;UBERON:0004347!1.06e-11!1;UBERON:0005420!1.06e-11!1;UBERON:0005732!1.06e-11!1;UBERON:0006057!1.06e-11!1;UBERON:0000978!1.06e-11!1;UBERON:0002103!1.06e-11!1;UBERON:0001665!1.06e-11!1;UBERON:0003823!1.06e-11!1;UBERON:0000154!1.06e-11!1;UBERON:0005733!1.06e-11!1;UBERON:0005730!1.06e-11!1;UBERON:0002171!1.31e-11!1;UBERON:0006518!1.31e-11!1;UBERON:0008949!1.31e-11!1;UBERON:0000101!1.31e-11!1;UBERON:0002167!1.31e-11!1;UBERON:0002370!2.30e-11!4;UBERON:0005058!2.30e-11!4;UBERON:0009113!2.30e-11!4;UBERON:0003295!2.30e-11!4;UBERON:0005562!2.30e-11!4;UBERON:0002372!6.00e-11!1;UBERON:0001961!6.00e-11!1;UBERON:0001744!6.00e-11!1;UBERON:0001735!6.00e-11!1;UBERON:0001042!1.08e-09!10;UBERON:0009145!1.08e-09!10;UBERON:0006562!7.37e-09!11;UBERON:0003351!7.32e-08!6;UBERON:0004177!7.46e-07!7
|ontology_enrichment_uberon_v019=UBERON:0002370;3.29e-195;2!UBERON:0005058;3.29e-195;2!UBERON:0009113;3.29e-195;2!UBERON:0004177;3.49e-79;5!UBERON:0005057;3.49e-79;5!UBERON:0000077;6.71e-16;27!UBERON:0002405;6.71e-16;27!UBERON:0002390;1.64e-10;32!UBERON:0002368;1.64e-10;33!UBERON:0000949;1.53e-08;43!UBERON:0002530;3.40e-07;57!UBERON:0002193;3.43e-07;42
|ontology_enrichment_uberon_v019=UBERON:0002370;3.29e-195;2!UBERON:0005058;3.29e-195;2!UBERON:0009113;3.29e-195;2!UBERON:0004177;3.49e-79;5!UBERON:0005057;3.49e-79;5!UBERON:0000077;6.71e-16;27!UBERON:0002405;6.71e-16;27!UBERON:0002390;1.64e-10;32!UBERON:0002368;1.64e-10;33!UBERON:0000949;1.53e-08;43!UBERON:0002530;3.40e-07;57!UBERON:0002193;3.43e-07;42
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-98,4;UBERON:0005058,1.55e-98,4;UBERON:0009113,1.55e-98,4;UBERON:0003295,1.55e-98,4;UBERON:0005562,1.55e-98,4;UBERON:0003351,2.83e-66,6;UBERON:0004177,4.76e-57,7;UBERON:0005057,4.76e-57,7;UBERON:0000974,2.00e-40,10;UBERON:0003408,2.00e-40,10;UBERON:0001042,2.00e-40,10;UBERON:0009145,2.00e-40,10;UBERON:0006562,6.80e-37,11;UBERON:0009722,6.80e-37,11;UBERON:0007690,6.80e-37,11;UBERON:0008814,3.88e-23,18;UBERON:0001557,5.37e-22,19;UBERON:0004807,2.22e-15,28;UBERON:0000077,6.74e-15,29;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0000072,1.08e-09,47;UBERON:0003929,1.34e-08,54;UBERON:0000065,1.34e-08,54;UBERON:0002530,5.66e-08,59;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,1.16260037704811,2.48298857183432,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154934401160603,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451191321234361,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,1.16260037704811,2.48298857183432,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0
|short_description=p4@ENST00000374945
|short_description=p4@ENST00000374945
}}
}}

Latest revision as of 21:00, 17 September 2015

Short description:p4@ENST00000374945
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_ENST00000374945_5end
Coexpression cluster:C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic
Association with transcript: 0bp_to_ENST00000374945_5end
EntrezGene:NA
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0.0
0.5
1.0
1.5
2.0
2.5
3.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr17:76274572..76274581,-&oldid=4084493"