FFCP PHASE1:Hg19::chr17:76677091..76677105,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:76677091..76677105,-
|short_description=p12@CYTH1
|description=CAGE_peak_12_at_CYTH1_5end
|association_with_transcript=42bp_to_ENST00000479122_5end
|Entr...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9267 | |EntrezGene=9267 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9501 | |HGNC=9501 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000479122_5end | |||
|cluster_id=chr17:76677091..76677105,- | |||
|coexpression_cluster_id=C3692 | |||
|description=CAGE_peak_12_at_CYTH1_5end | |||
|id=chr17:76677091..76677105,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.64e-11;19!CL:0002536;2.31e-10;2!CL:0002577;1.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.41e-11,19;CL:0002536,1.59e-10,2;CL:0000066,5.81e-09,253;CL:0002577,1.57e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.38e-17;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.39e-14!9;UBERON:0003124!1.10e-09!7;UBERON:0005631!1.41e-08!14;UBERON:0000158!1.41e-08!14;UBERON:0000478!2.28e-07!24;UBERON:0001557!2.40e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.90e-42;9!UBERON:0001557;9.90e-42;9!UBERON:0000072;1.58e-11;37!UBERON:0000065;4.34e-09;44!UBERON:0000478;6.59e-09;24!UBERON:0001264;2.62e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.26e-42,9;UBERON:0001557,6.09e-19,19;UBERON:0008947,5.87e-13,38;UBERON:0003258,5.87e-13,38;UBERON:0000072,4.73e-10,47;UBERON:0000478,5.90e-09,24;UBERON:0005631,1.67e-08,14;UBERON:0000158,1.67e-08,14;UBERON:0000065,1.82e-08,54;UBERON:0001264,2.17e-07,10;UBERON:0003124,6.55e-07,7 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0.491467873003018,0,2.40285509343189,2.63766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0.384273959177026,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,2.1349799145941,0.24666754841716,0,0,0,0,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,6.27026040211173,5.05754070234305,1.20505514941741,6.94852028214082,8.93305720778865,4.03360052488864,4.04493924480493,4.12065076763227,1.92373578473195,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,1.76113041353732,0,0,0,0,0,0,0,0,0,1.51183915378974,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,2.26220483947312,0.300343057843917,0,0.224262168690721,0,0.1466765716419,3.49033632546,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,2.37585561880029,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,11.6504807657348,3.93107381328584,0.248107807818777,0.306923946576125,0.280660094433074,0.256278298511402,1.02341449813341,0.321707842287215,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0,4.38417673959782,0.316654886678627,0,0,2.15915916102139,1.54227252690289,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0.275673144969061,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.608731130888112,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.0915975934018623,9.06159119231679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,1.32930774541437,1.323967823502,1.88359751044335,2.38944859545918,0,0,0,0,0.435296032902013,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0,0,0,0,0.372757606696298,0,1.08723364858891,1.255234155748,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,1.6135860539956,0,0,0,0,0,0,0,7.18381149374925,0,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0.318593534327405,0,0.931577741257556,0,0,0,0.150257608997218,0,0,0.181848659202559,0.537052785212442,0,0.398095888698616,2.00013882331577,0,0,0,0,0,0,0,0.463044948647668,0.489473409012935,4.11904334487421,0.617602894321944,1.09642024789354,0,0,0,0,1.0362910251936,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,2.29972369751271,0,0.336283722218824,0,0,0.443511850813194,0,0,0.0679697329768317,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,0.955538938977433,0,0,0,0,0,1.1598144313382,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,1.79087190944144,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0,0,0,0,0.491467873003018,0,2.40285509343189,2.63766978228454,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464858073811369,0.411167888021826,0,0.28769239232215,0,0,0,0.645484683583826,0,0,0,0,0.612167784741805,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0,0,0,0,0.384273959177026,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0.795285947051099,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,2.1349799145941,0.24666754841716,0,0,0,0,2.30470369792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0,0,6.27026040211173,5.05754070234305,1.20505514941741,6.94852028214082,8.93305720778865,4.03360052488864,4.04493924480493,4.12065076763227,1.92373578473195,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0.109750285408626,0,0.201057944823262,0.0925884451585296,0,0,0,0,1.76113041353732,0,0,0,0,0,0,0,0,0,1.51183915378974,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,2.26220483947312,0.300343057843917,0,0.224262168690721,0,0.1466765716419,3.49033632546,0,0,0,0,0,0,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,2.37585561880029,0,0,0.199945982364114,0,0.502257091432126,0,0,0,0,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,11.6504807657348,3.93107381328584,0.248107807818777,0.306923946576125,0.280660094433074,0.256278298511402,1.02341449813341,0.321707842287215,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0,4.38417673959782,0.316654886678627,0,0,2.15915916102139,1.54227252690289,0.270946437543853,1.50506932156456,0,0,0.223874754722178,0,0,0,0,0,0,0,0,0,1.30012049207304,0,0,0,0,0.275673144969061,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.608731130888112,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0,0.349934720244983,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,2.54253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0.0915975934018623,9.06159119231679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,0,0,1.32930774541437,1.323967823502,1.88359751044335,2.38944859545918,0,0,0,0,0.435296032902013,0,0,0,0.0730893170861856,0,0,0.0882561266915003,0,0.274083849293502,0,0,0,0,0,0.19980960958213,0,0,0,0,0.372757606696298,0,1.08723364858891,1.255234155748,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0.720599767084807,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0.211200673038813,1.6135860539956,0,0,0,0,0,0,0,7.18381149374925,0,0.170388021785422,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0.249960815924213,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0,0.318593534327405,0,0.931577741257556,0,0,0,0.150257608997218,0,0,0.181848659202559,0.537052785212442,0,0.398095888698616,2.00013882331577,0,0,0,0,0,0,0,0.463044948647668,0.489473409012935,4.11904334487421,0.617602894321944,1.09642024789354,0,0,0,0,1.0362910251936,0,0,0,0,0.163565394255844,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,2.29972369751271,0,0.336283722218824,0,0,0.443511850813194,0,0,0.0679697329768317,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0.31020638566432,0.955538938977433,0,0,0,0,0,1.1598144313382,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0.109265571963696,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,1.79087190944144,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@CYTH1 | |||
}} | }} |
Latest revision as of 22:31, 17 September 2015
Short description: | p12@CYTH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CYTH1_5end |
Coexpression cluster: | C3692_chorionic_Hep2_lens_embryonic_Placental_choriocarcinoma_mesothelioma |
Association with transcript: | 42bp_to_ENST00000479122_5end |
EntrezGene: | CYTH1 |
HGNC: | 9501 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.41e-11 | 19 |
amniotic epithelial cell | 1.59e-10 | 2 |
epithelial cell | 5.81e-09 | 253 |
placental epithelial cell | 1.57e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.26e-42 | 9 |
upper respiratory tract | 6.09e-19 | 19 |
respiratory primordium | 5.87e-13 | 38 |
endoderm of foregut | 5.87e-13 | 38 |
segment of respiratory tract | 4.73e-10 | 47 |
extraembryonic structure | 5.90e-09 | 24 |
extraembryonic membrane | 1.67e-08 | 14 |
membranous layer | 1.67e-08 | 14 |
respiratory tract | 1.82e-08 | 54 |
pancreas | 2.17e-07 | 10 |
chorion | 6.55e-07 | 7 |