FFCP PHASE1:Hg19::chr3:31574110..31574146,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=201595 | |EntrezGene=201595 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30611 | |HGNC=30611 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000453168_5end | |association_with_transcript=0bp_to_ENST00000453168_5end | ||
|cluster_id=chr3:31574110..31574146,+ | |||
|description=CAGE_peak_4_at_STT3B_5end | |description=CAGE_peak_4_at_STT3B_5end | ||
|id=chr3:31574110..31574146,+ | |id=chr3:31574110..31574146,+ | ||
|ontology_enrichment_celltype=CL:0000860;9.29e-07;33!CL:0002057;9.29e-07;33 | |ontology_enrichment_celltype=CL:0000037!5.81e-19!172;CL:0000566!5.81e-19!172;CL:0002032!5.80e-17!165;CL:0000837!5.80e-17!165;CL:0000988!1.31e-15!182;CL:0002087!5.25e-14!119;CL:0000738!3.59e-13!140;CL:0002031!7.51e-13!124;CL:0000763!1.23e-09!112;CL:0000049!1.23e-09!112;CL:0000838!7.40e-08!52;CL:0000542!7.66e-08!53;CL:0000051!7.66e-08!53;CL:0002057!1.11e-07!42;CL:0000557!6.26e-07!71 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;9.29e-07;33!CL:0002057;9.29e-07;33 | ||
|ontology_enrichment_disease=DOID:1240;1.97e-07;39 | |ontology_enrichment_celltype_v019_2=CL:0000037,3.75e-20,168;CL:0002032,4.26e-18,161;CL:0000837,4.26e-18,161;CL:0000988,3.82e-17,177;CL:0002087,3.10e-15,115;CL:0000738,3.15e-14,136;CL:0002031,5.62e-14,120;CL:0000763,1.28e-10,108;CL:0000049,1.28e-10,108;CL:0000557,5.69e-08,67;CL:0000838,7.40e-08,52;CL:0000542,7.66e-08,53;CL:0000051,7.66e-08,53;CL:0000860,1.11e-07,42;CL:0002057,1.11e-07,42;CL:0002009,1.59e-07,61;CL:0002194,2.65e-07,59;CL:0000576,2.65e-07,59;CL:0000040,2.65e-07,59;CL:0000559,2.65e-07,59;CL:0000766,5.56e-07,72;CL:0000839,7.66e-07,66 | ||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.77e-09!51;DOID:0060083!1.77e-09!51;DOID:1240!1.17e-08!39;DOID:8692!9.36e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.97e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.75e-09,51;DOID:0060083,1.75e-09,51;DOID:1240,1.15e-08,39;DOID:8692,9.26e-07,31 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.05e-07,82 | |||
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| ||
|short_description=p4@STT3B | |short_description=p4@STT3B | ||
}} | }} |
Latest revision as of 22:36, 17 September 2015
Short description: | p4@STT3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_STT3B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000453168_5end |
EntrezGene: | STT3B |
HGNC: | 30611 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 3.75e-20 | 168 |
hematopoietic oligopotent progenitor cell | 4.26e-18 | 161 |
hematopoietic multipotent progenitor cell | 4.26e-18 | 161 |
hematopoietic cell | 3.82e-17 | 177 |
nongranular leukocyte | 3.10e-15 | 115 |
leukocyte | 3.15e-14 | 136 |
hematopoietic lineage restricted progenitor cell | 5.62e-14 | 120 |
myeloid cell | 1.28e-10 | 108 |
common myeloid progenitor | 1.28e-10 | 108 |
granulocyte monocyte progenitor cell | 5.69e-08 | 67 |
lymphoid lineage restricted progenitor cell | 7.40e-08 | 52 |
lymphocyte | 7.66e-08 | 53 |
common lymphoid progenitor | 7.66e-08 | 53 |
classical monocyte | 1.11e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.11e-07 | 42 |
macrophage dendritic cell progenitor | 1.59e-07 | 61 |
monopoietic cell | 2.65e-07 | 59 |
monocyte | 2.65e-07 | 59 |
monoblast | 2.65e-07 | 59 |
promonocyte | 2.65e-07 | 59 |
myeloid leukocyte | 5.56e-07 | 72 |
myeloid lineage restricted progenitor cell | 7.66e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.05e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.75e-09 | 51 |
immune system cancer | 1.75e-09 | 51 |
leukemia | 1.15e-08 | 39 |
myeloid leukemia | 9.26e-07 | 31 |