FFCP PHASE1:Hg19::chr4:5053032..5053054,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:5053032..5053054,+
|short_description=p5@STK32B
|description=CAGE_peak_5_at_STK32B_5end
|association_with_transcript=-114bp_to_ENST00000282908_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55351 | |EntrezGene=55351 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14217 | |HGNC=14217 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY57 | |UniProt=Q9NY57 | ||
|association_with_transcript=-114bp_to_ENST00000282908_5end | |||
|cluster_id=chr4:5053032..5053054,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_5_at_STK32B_5end | |||
|id=chr4:5053032..5053054,+ | |||
|ontology_enrichment_celltype=CL:0002139!7.87e-17!24;CL:0000115!1.07e-12!35;CL:0005020!1.04e-10!6;CL:0002138!1.04e-10!6;CL:0005022!1.04e-10!6;CL:0002078!4.59e-10!44;CL:0000071!3.34e-09!18;CL:0002546!3.34e-09!18;CL:0000213!1.80e-07!57;CL:0000215!1.80e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002144;5.06e-19;3!CL:0000138;1.01e-09;6!CL:0000153;9.10e-07;9!CL:0000447;9.10e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002144,5.06e-19,3;CL:0000058,1.01e-09,6;CL:0000138,1.01e-09,6;CL:0000153,9.10e-07,9;CL:0000447,9.10e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.80e-08;2 | |||
|ontology_enrichment_disease=DOID:17!1.47e-07!5;DOID:450!1.47e-07!5;DOID:66!1.47e-07!5;DOID:423!1.47e-07!5;DOID:0080000!1.47e-07!5;DOID:11722!1.47e-07!5 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.34e-09!18;UBERON:0004638!3.34e-09!18;UBERON:0004852!3.34e-09!18;UBERON:0002465!5.07e-08!10;UBERON:0001473!9.42e-08!8;UBERON:0004536!9.42e-08!8;UBERON:0006558!9.42e-08!8;UBERON:0007023!2.36e-07!115;UBERON:0000487!4.99e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.14e-28;2!UBERON:0005058;3.14e-28;2!UBERON:0009113;3.14e-28;2!UBERON:0010523;5.06e-19;3!UBERON:0001915;5.06e-19;3!UBERON:0001982;5.06e-19;3!UBERON:0004177;6.70e-12;5!UBERON:0005057;6.70e-12;5!UBERON:0003127;6.80e-08;2!UBERON:0000341;6.80e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010523,5.06e-19,3;UBERON:0001915,5.06e-19,3;UBERON:0001982,5.06e-19,3;UBERON:0002370,1.23e-14,4;UBERON:0005058,1.23e-14,4;UBERON:0009113,1.23e-14,4;UBERON:0003295,1.23e-14,4;UBERON:0005562,1.23e-14,4;UBERON:0000974,1.00e-12,10;UBERON:0003351,4.54e-10,6;UBERON:0004177,9.33e-09,7;UBERON:0005057,9.33e-09,7;UBERON:0003127,6.58e-08,2;UBERON:0000341,7.52e-08,2 | |||
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| ||
|short_description=p5@STK32B | |||
}} | }} |
Latest revision as of 23:32, 17 September 2015
Short description: | p5@STK32B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_STK32B_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | -114bp_to_ENST00000282908_5end |
EntrezGene: | STK32B |
HGNC: | 14217 |
UniProt: | Q9NY57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
capillary endothelial cell | 5.06e-19 | 3 |
chondroblast | 1.01e-09 | 6 |
chondrocyte | 1.01e-09 | 6 |
GAG secreting cell | 9.10e-07 | 9 |
carbohydrate secreting cell | 9.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
microcirculatory vessel | 5.06e-19 | 3 |
endothelium of capillary | 5.06e-19 | 3 |
capillary | 5.06e-19 | 3 |
thymus | 1.23e-14 | 4 |
hemolymphoid system gland | 1.23e-14 | 4 |
thymic region | 1.23e-14 | 4 |
pharyngeal gland | 1.23e-14 | 4 |
thymus primordium | 1.23e-14 | 4 |
neck | 1.00e-12 | 10 |
pharyngeal epithelium | 4.54e-10 | 6 |
hemopoietic organ | 9.33e-09 | 7 |
immune organ | 9.33e-09 | 7 |
open tracheal system trachea | 6.58e-08 | 2 |
throat | 7.52e-08 | 2 |