FFCP PHASE1:Hg19::chr3:32859521..32859546,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=131405 | |EntrezGene=131405 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=32669 | |HGNC=32669 | ||
|TSSclassifier=strong | |||
|UniProt=Q2Q1W2 | |UniProt=Q2Q1W2 | ||
|association_with_transcript=11bp_to_ENST00000383763,NM_001039111,uc003cff.2_5end | |association_with_transcript=11bp_to_ENST00000383763,NM_001039111,uc003cff.2_5end | ||
|cluster_id=chr3:32859521..32859546,+ | |||
|coexpression_cluster_id=C4326 | |||
|description=CAGE_peak_1_at_TRIM71_5end | |description=CAGE_peak_1_at_TRIM71_5end | ||
|id=chr3:32859521..32859546,+ | |id=chr3:32859521..32859546,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.45e-21!7;CL:0000586!1.45e-21!7;CL:0002322!1.81e-16!5 | |ontology_enrichment_celltype=CL:0000039!1.45e-21!7;CL:0000586!1.45e-21!7;CL:0002322!1.81e-16!5 | ||
|ontology_enrichment_celltype_v019=CL:0002322;3.10e-42;5!CL:0000039;1.51e-41;7!CL:0000586;1.51e-41;7!CL:0002321;4.86e-14;15!CL:0000540;1.36e-13;6!CL:0000404;1.36e-13;6!CL:0000148;3.38e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,3.52e-42,5;CL:0000039,9.19e-42,7;CL:0000586,9.19e-42,7;CL:0000540,1.33e-13,6;CL:0000031,1.33e-13,6;CL:0000404,1.33e-13,6;CL:0000047,2.49e-10,8;CL:0000148,3.38e-08,10;CL:0000541,3.38e-08,10 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.81e-20;10!UBERON:0005564;2.81e-20;10!CL:0000031;1.36e-13;6!UBERON:0004161;3.42e-07;11 | |||
|ontology_enrichment_disease=DOID:3095!2.24e-12!22;DOID:2994!2.24e-12!22 | |ontology_enrichment_disease=DOID:3095!2.24e-12!22;DOID:2994!2.24e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;6.05e-23;22!DOID:2994;6.05e-23;22!DOID:1799;3.74e-10;1!DOID:10165;3.74e-10;1!DOID:1798;3.74e-10;1!DOID:225;1.83e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.85e-23,22;DOID:2994,4.85e-23,22;DOID:1799,3.74e-10,1;DOID:10165,3.74e-10,1;DOID:1798,3.74e-10,1;DOID:225,1.91e-09,1;DOID:305,1.39e-07,106;DOID:0050687,1.72e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.86e-13!8;UBERON:0003135!1.92e-09!11 | |ontology_enrichment_uberon=UBERON:0000473!2.86e-13!8;UBERON:0003135!1.92e-09!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;1.88e-16;8!UBERON:0003135;4.97e-12;11!UBERON:0000922;3.80e-10;49!UBERON:0000991;1.34e-09;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,1.47e-16,8;UBERON:0003135,4.17e-12,11;UBERON:0000991,1.15e-09,21;UBERON:0009196,1.15e-09,21;UBERON:0009117,1.15e-09,21;UBERON:0005564,1.15e-09,21;UBERON:0004176,3.22e-09,22 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0.324547393654683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.75697453905422,2.65059536642971,3.71820617182459,2.69518743039963,3.78481276313443,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0.997896857164083,0.957526850661834,0,0.649243880549111,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0.23874448473769,0.890894042497916,0.921482106297696,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.922255617552241,2.87224462111271,2.7161842980502,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,1.27217764290547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,1.10296455230113,0.659326867049332,1.01105315781277,0,0,0,0.136203406111576,6.75163223553081,5.63911690048659,3.73896304226267,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0.314408610199332,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17360902663555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0,0.20170506870352,0,7.59529413996125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90182777120682,3.71502944676565,0.380095503034311,1.93778776509765,1.60330443159336,1.10273879441814,1.25353769646188,0.227336094654718,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p1@TRIM71 | |short_description=p1@TRIM71 | ||
}} | }} |
Latest revision as of 23:34, 17 September 2015
Short description: | p1@TRIM71 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM71_5end |
Coexpression cluster: | C4326_amniotic_H9_testicular_pancreatic_iPS_choriocarcinoma_signet |
Association with transcript: | 11bp_to_ENST00000383763, NM_001039111, uc003cff.2_5end |
EntrezGene: | TRIM71 |
HGNC: | 32669 |
UniProt: | Q2Q1W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 3.52e-42 | 5 |
germ line cell | 9.19e-42 | 7 |
germ cell | 9.19e-42 | 7 |
neuron | 1.33e-13 | 6 |
neuroblast | 1.33e-13 | 6 |
electrically signaling cell | 1.33e-13 | 6 |
neuronal stem cell | 2.49e-10 | 8 |
melanocyte | 3.38e-08 | 10 |
melanoblast | 3.38e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
testis | 1.47e-16 | 8 |
male reproductive organ | 4.17e-12 | 11 |
gonad | 1.15e-09 | 21 |
indifferent external genitalia | 1.15e-09 | 21 |
indifferent gonad | 1.15e-09 | 21 |
gonad primordium | 1.15e-09 | 21 |
external genitalia | 3.22e-09 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.85e-23 | 22 |
germ cell cancer | 4.85e-23 | 22 |
islet cell tumor | 3.74e-10 | 1 |
endocrine pancreas cancer | 3.74e-10 | 1 |
pancreatic endocrine carcinoma | 3.74e-10 | 1 |
syndrome | 1.91e-09 | 1 |
carcinoma | 1.39e-07 | 106 |
cell type cancer | 1.72e-07 | 143 |