FFCP PHASE1:Hg19::chr19:39926576..39926593,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:39926576..39926593,-
|short_description=p1@RPS16
|description=CAGE_peak_1_at_RPS16_5end
|association_with_transcript=0bp_to_ENST00000339471_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6217 | |EntrezGene=6217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10396 | |HGNC=10396 | ||
|TSSclassifier=strong | |||
|UniProt=Q6IPX4 | |UniProt=Q6IPX4 | ||
|association_with_transcript=0bp_to_ENST00000339471_5end | |||
|cluster_id=chr19:39926576..39926593,- | |||
|coexpression_cluster_id=C527 | |||
|description=CAGE_peak_1_at_RPS16_5end | |||
|id=chr19:39926576..39926593,- | |||
|ontology_enrichment_celltype=CL:0000542!1.93e-17!53;CL:0000051!1.93e-17!53;CL:0000838!4.87e-17!52;CL:0000012!2.70e-13!682;CL:0000003!5.01e-13!722;CL:0000548!4.08e-12!679;CL:0000004!4.08e-12!679;CL:0000255!4.08e-12!679;CL:0000144!5.64e-11!625;CL:0000791!7.62e-11!18;CL:0000789!7.62e-11!18;CL:0002420!7.62e-11!18;CL:0002419!7.62e-11!18;CL:0000790!7.62e-11!18;CL:0002087!3.81e-10!119;CL:0000945!4.89e-09!24;CL:0000826!4.89e-09!24;CL:0000236!6.28e-09!14;CL:0002371!6.37e-09!591;CL:0000084!1.37e-08!25;CL:0000827!1.37e-08!25;CL:0002031!1.24e-07!124;CL:0000625!1.68e-07!11;CL:0000988!1.70e-07!182;CL:0000037!2.19e-07!172;CL:0000566!2.19e-07!172;CL:0000738!2.26e-07!140;CL:0000063!8.11e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000542;5.46e-11;53!CL:0000791;7.64e-11;18!CL:0000789;7.64e-11;18!CL:0002419;7.64e-11;18!CL:0000945;4.88e-09;24!CL:0000236;1.24e-08;13!CL:0000084;1.38e-08;25!CL:0000625;1.68e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,1.93e-17,53;CL:0000051,1.93e-17,53;CL:0000838,4.87e-17,52;CL:0000791,7.62e-11,18;CL:0000789,7.62e-11,18;CL:0002420,7.62e-11,18;CL:0002419,7.62e-11,18;CL:0000790,7.62e-11,18;CL:0002087,2.07e-10,115;CL:0000945,4.89e-09,24;CL:0000826,4.89e-09,24;CL:0000236,6.28e-09,14;CL:0000084,1.37e-08,25;CL:0000827,1.37e-08,25;CL:0002031,8.15e-08,120;CL:0000738,1.59e-07,136;CL:0000037,1.67e-07,168;CL:0000625,1.68e-07,11;CL:0000988,2.18e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000051;5.46e-11;53!CL:0000790;7.64e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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240358021064,1147.95577093788 | ||
|short_description=p1@RPS16 | |||
}} | }} |
Latest revision as of 23:37, 17 September 2015
Short description: | p1@RPS16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS16_5end |
Coexpression cluster: | C527_CD4_CD8_CD19_CD34_CD133_skeletal_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000339471_5end |
EntrezGene: | RPS16 |
HGNC: | 10396 |
UniProt: | Q6IPX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 1.93e-17 | 53 |
common lymphoid progenitor | 1.93e-17 | 53 |
lymphoid lineage restricted progenitor cell | 4.87e-17 | 52 |
mature alpha-beta T cell | 7.62e-11 | 18 |
alpha-beta T cell | 7.62e-11 | 18 |
immature T cell | 7.62e-11 | 18 |
mature T cell | 7.62e-11 | 18 |
immature alpha-beta T cell | 7.62e-11 | 18 |
nongranular leukocyte | 2.07e-10 | 115 |
lymphocyte of B lineage | 4.89e-09 | 24 |
pro-B cell | 4.89e-09 | 24 |
B cell | 6.28e-09 | 14 |
T cell | 1.37e-08 | 25 |
pro-T cell | 1.37e-08 | 25 |
hematopoietic lineage restricted progenitor cell | 8.15e-08 | 120 |
leukocyte | 1.59e-07 | 136 |
hematopoietic stem cell | 1.67e-07 | 168 |
CD8-positive, alpha-beta T cell | 1.68e-07 | 11 |
hematopoietic cell | 2.18e-07 | 177 |