FFCP PHASE1:Hg19::chr2:64681348..64681364,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29094 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25012 | |||
|TSSclassifier=strong | |||
|UniProt=Q3ZCW2 | |||
|association_with_transcript=21bp_to_NM_014181,uc002scy.3_5end | |||
|cluster_id=chr2:64681348..64681364,+ | |||
|coexpression_cluster_id=C2548 | |||
|description=CAGE_peak_1_at_LGALSL_5end | |||
|id=chr2:64681348..64681364,+ | |||
|ontology_enrichment_celltype=CL:0000223!1.54e-13!59;CL:0000066!2.54e-13!254;CL:0002076!4.22e-12!43 | |||
|ontology_enrichment_celltype_v019=CL:0002076;4.62e-11;42!CL:0002251;5.00e-08;20!CL:0002368;7.93e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,4.81e-17,58;CL:0002076,3.84e-15,42;CL:0002251,4.42e-08,20;CL:0000066,4.63e-08,253;CL:0002368,7.66e-07,13 | |||
|ontology_enrichment_development_v019=CL:0000223;8.50e-10;58 | |||
|ontology_enrichment_disease=DOID:305!2.24e-07!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.35e-15!169;UBERON:0000925!6.35e-15!169;UBERON:0006595!6.35e-15!169;UBERON:0007023!2.62e-14!115;UBERON:0004921!2.11e-13!129;UBERON:0004185!2.11e-13!129;UBERON:0001007!6.40e-13!155;UBERON:0001555!6.40e-13!155;UBERON:0007026!6.40e-13!155;UBERON:0000077!2.26e-10!130;UBERON:0001004!9.50e-10!72;UBERON:0001041!1.24e-09!98;UBERON:0005911!1.50e-08!82;UBERON:0000922!1.62e-08!612;UBERON:0000468!1.24e-07!659;UBERON:0002050!1.40e-07!605;UBERON:0005423!1.40e-07!605;UBERON:0000923!2.38e-07!604;UBERON:0005291!2.38e-07!604;UBERON:0006598!2.38e-07!604;UBERON:0002532!2.38e-07!604;UBERON:0000480!2.66e-07!626;UBERON:0002365!4.13e-07!31;UBERON:0002330!4.13e-07!31;UBERON:0000178!4.43e-07!15;UBERON:0000179!4.43e-07!15;UBERON:0000463!4.43e-07!15;UBERON:0000467!4.88e-07!625;UBERON:0000062!6.03e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.51e-10;33!UBERON:0000178;9.17e-09;15!UBERON:0000179;9.17e-09;15!UBERON:0000463;9.17e-09;15!UBERON:0002365;1.47e-08;31!UBERON:0002330;1.47e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.64e-16,160;UBERON:0000925,3.64e-16,160;UBERON:0006595,3.64e-16,160;UBERON:0004921,2.76e-15,118;UBERON:0001007,1.06e-13,145;UBERON:0001555,1.06e-13,145;UBERON:0007026,1.06e-13,145;UBERON:0007023,6.16e-11,114;UBERON:0001041,1.81e-10,87;UBERON:0002365,9.56e-09,31;UBERON:0002330,9.56e-09,31;UBERON:0000178,1.12e-08,15;UBERON:0000179,1.12e-08,15;UBERON:0000463,1.12e-08,15;UBERON:0001004,7.19e-08,74;UBERON:0005911,1.87e-07,82 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,1.22866968250754,0.697801167972428,0.218441372130172,0.527533956456907,0,0.331397375727916,1.34465029290355,0,0,0,0,0,0,0.286235987131057,0,0.376627918784408,0.305653622991805,0.328402357799783,0.236132343941038,1.96682138424452,2.30297638858328,0.154816123316076,24.824373060931,20.7832083956993,7.02532619316897,0,0,0.880801318004542,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0.436194716338694,0.377875943688809,0,0.697287110717054,0.822335776043652,0.309706370895104,0.28769239232215,0,0.709446689665756,1.37898272294647,0.645484683583826,1.35426486594342,0.376484679085209,0,0.224723484445085,0.918251677112708,0,1.27867425159808,0.659702600373432,0.199463657621632,0.426224750532694,0.290209238628584,0,1.24564449799115,0.502497330513487,0,0.217188844705117,1.21079900526674,0.368277635987565,1.89877432464531,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,1.09227722252426,0.889509253863555,0,0.800791974072025,1.14950487990897,0,0,0.569212969109448,0,0.764546456250458,2.64342657158052,3.36305137788922,1.58030450865046,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,1.24930726552346,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0,0,0,0.795285947051099,3.89307896242109,0.472674085820339,0,0.175669571386252,1.0478326039817,44.8083204599827,54.8760975320955,0.649094787309367,0.522389211897802,0.531831842075461,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.208994966536811,0,2.84613010149368,1.00416183829401,0.805658634218294,0.760272105718513,0.24406205754817,0,0.81014194788176,0.267899184852239,0,0.337834441449967,1.53316637465883,0,0.183201743930407,1.31780417436063,15.511210565933,26.6017371806946,0,0.12663051166458,0,0,0,1.12135520028461,0,0.49333509683432,0.311211035399766,0.134710672069688,0,1.21085942115945,0.576175924479999,0.468642863667593,0,0,0.448346041655403,0,0,0.140450806702248,0,0,0.516628905878827,0,0,0,0,0,0.375355559615893,0,0,0,0.45071417671979,0.340296549480063,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,29.3756496808211,43.3666331739427,60.8025742224688,0.365921118388786,0.265059536642971,0.348581828608555,1.65857688024593,1.26160425437814,1.09493207722749,0,0,0,0,0,0.946454400318751,0.168584690078102,1.20505514941741,0.661763836394364,0.653638332277218,0.949082476444386,1.34831308160164,1.17732879075208,2.30848294167834,5.16708818237254,0,0.4115740113314,0,1.26755034821831,1.96565443335525,1.77236972004421,0,5.53447973444011,0,43.9001141634502,8.99214026060957,11.4603028549259,10.4624943029138,0.325808305310325,1.03993478527958,0,1.73895607462615,0.234817388471643,0.288732895522148,0,0.761016608938393,0.790204397959275,0,0.492434012174795,1.40402559083543,0.297262324577456,26.2454735162976,6.88726725615324,19.5649634194493,0.985143749731331,2.3250715081117,3.4504441124869,0,0,1.24396869324463,0.288239906833923,0.88369703398466,0.126995788584338,0.381988425558278,0,1.71072446022705,0,0,0,0.112131084345361,0,0,0.775630294546667,0,0,0.26593811658487,0,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,2.10833939483032,0,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0.637938751653163,0.749007023947182,2.99161459204025,15.7477895105693,0.12269149171914,0,0.542530047399471,0.207970861530807,0.713715955188647,0.788512075169673,0,0.300946099727719,2.27407504055985,1.03473071292505,0,0,0.0868836144680828,0,0,1.44737618286021,1.50999940573032,0.640365346820666,10.0032098577266,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,1.48418066444991,0,0,0,0,0,5.55953468121462,11.8298817478938,10.3130707608204,0,0,0.131124414959424,0.451199612907412,0.770153371044148,0,0,0.316654886678627,1.13733384070897,0.510281115829547,0,1.54227252690289,0,0.501689773854853,1.78413391131527,0.831076008928724,0.223874754722178,3.06963827304308,6.79732172664741,0.512900250232778,0.328014645699706,1.30151357865721,1.75169719801128,0,0.082509499920588,24.1191525958392,44.2040967304834,0,0.193341436584244,0.770243085573222,1.07452572308291,0.137836572484531,0,0.725083469571143,0,0.0890320356467374,3.63626813794152,4.42037154939744,0.893288987462089,2.93357564481095,0,0,0,0,0.532306030317022,0,0,0.429374660225974,0.372158369359667,0,0.190630193923825,0,0,0,0,0,0,0.353437207037059,0.202182481573316,1.58510321173008,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0.281695602532241,0,0,0.35667105148125,0,1.26664581178598,0,1.13841952129715,0.699869440489966,10.2957660616298,4.02181365321472,9.80018863751903,2.7301702225266,1.72202149068492,11.7930032967338,18.1806362950037,3.44585100310439,28.4170661170015,18.351292971417,25.0644762356632,7.86164859010704,6.17043409629291,23.3450392029378,15.6609116799053,38.8631336384192,1.06824071127473,0.962479855263359,4.41072388765857,0.185803175125719,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0.5078753334048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| |||
|short_description=p1@LGALSL | |||
}} |
Latest revision as of 23:38, 17 September 2015
Short description: | p1@LGALSL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGALSL_5end |
Coexpression cluster: | C2548_salivary_immature_tongue_esophagus_amniotic_cervical_Corneal |
Association with transcript: | 21bp_to_NM_014181, uc002scy.3_5end |
EntrezGene: | LGALSL |
HGNC: | 25012 |
UniProt: | Q3ZCW2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.81e-17 | 58 |
endo-epithelial cell | 3.84e-15 | 42 |
epithelial cell of alimentary canal | 4.42e-08 | 20 |
epithelial cell | 4.63e-08 | 253 |
respiratory epithelial cell | 7.66e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.64e-16 | 160 |
endoderm | 3.64e-16 | 160 |
presumptive endoderm | 3.64e-16 | 160 |
subdivision of digestive tract | 2.76e-15 | 118 |
digestive system | 1.06e-13 | 145 |
digestive tract | 1.06e-13 | 145 |
primitive gut | 1.06e-13 | 145 |
adult organism | 6.16e-11 | 114 |
foregut | 1.81e-10 | 87 |
exocrine gland | 9.56e-09 | 31 |
exocrine system | 9.56e-09 | 31 |
blood | 1.12e-08 | 15 |
haemolymphatic fluid | 1.12e-08 | 15 |
organism substance | 1.12e-08 | 15 |
respiratory system | 7.19e-08 | 74 |
endo-epithelium | 1.87e-07 | 82 |