FFCP PHASE1:Hg19::chr19:40228629..40228645,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1178 | |EntrezGene=1178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2014 | |HGNC=2014 | ||
|TSSclassifier=strong | |||
|UniProt=Q05315 | |UniProt=Q05315 | ||
|association_with_transcript=22bp_to_ENST00000221804,uc002omh.2_5end | |association_with_transcript=22bp_to_ENST00000221804,uc002omh.2_5end | ||
|cluster_id=chr19:40228629..40228645,- | |||
|coexpression_cluster_id=C3788 | |coexpression_cluster_id=C3788 | ||
|description=CAGE_peak_1_at_CLC_5end | |description=CAGE_peak_1_at_CLC_5end | ||
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|ontology_enrichment_celltype=CL:0000037!3.37e-25!172;CL:0000566!3.37e-25!172;CL:0000766!5.47e-25!76;CL:0000738!2.09e-23!140;CL:0000988!6.93e-23!182;CL:0000763!4.81e-22!112;CL:0000049!4.81e-22!112;CL:0002032!4.78e-21!165;CL:0000837!4.78e-21!165;CL:0000839!9.90e-18!70;CL:0000094!4.79e-17!8;CL:0002087!1.13e-16!119;CL:0002057!1.33e-16!42;CL:0002194!5.57e-16!63;CL:0000576!5.57e-16!63;CL:0000040!5.57e-16!63;CL:0000559!5.57e-16!63;CL:0002031!1.65e-15!124;CL:0002009!2.98e-15!65;CL:0000860!4.50e-15!45;CL:0000557!2.01e-14!71;CL:0000081!7.00e-12!11;CL:0000775!1.40e-07!3;CL:0000767!2.55e-07!3;CL:0000842!4.69e-07!3 | |ontology_enrichment_celltype=CL:0000037!3.37e-25!172;CL:0000566!3.37e-25!172;CL:0000766!5.47e-25!76;CL:0000738!2.09e-23!140;CL:0000988!6.93e-23!182;CL:0000763!4.81e-22!112;CL:0000049!4.81e-22!112;CL:0002032!4.78e-21!165;CL:0000837!4.78e-21!165;CL:0000839!9.90e-18!70;CL:0000094!4.79e-17!8;CL:0002087!1.13e-16!119;CL:0002057!1.33e-16!42;CL:0002194!5.57e-16!63;CL:0000576!5.57e-16!63;CL:0000040!5.57e-16!63;CL:0000559!5.57e-16!63;CL:0002031!1.65e-15!124;CL:0002009!2.98e-15!65;CL:0000860!4.50e-15!45;CL:0000557!2.01e-14!71;CL:0000081!7.00e-12!11;CL:0000775!1.40e-07!3;CL:0000767!2.55e-07!3;CL:0000842!4.69e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.45e-33;8!CL:0000081;4.79e-24;11!CL:0000775;5.47e-14;3!CL:0000767;1.88e-13;3!CL:0000226;6.83e-13;3!CL:0000842;6.83e-13;3!CL:0000764;3.21e-10;2!CL:0000558;3.21e-10;2!CL:0000771;1.26e-09;2 | |ontology_enrichment_celltype_v019=CL:0000094;1.45e-33;8!CL:0000081;4.79e-24;11!CL:0000775;5.47e-14;3!CL:0000767;1.88e-13;3!CL:0000226;6.83e-13;3!CL:0000842;6.83e-13;3!CL:0000764;3.21e-10;2!CL:0000558;3.21e-10;2!CL:0000771;1.26e-09;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.42e-33,8;CL:0000081,4.72e-24,11;CL:0000775,5.47e-14,3;CL:0000767,1.88e-13,3;CL:0000226,6.56e-13,3;CL:0000842,6.56e-13,3;CL:0000037,1.62e-12,168;CL:0000988,1.47e-11,177;CL:0000764,3.21e-10,2;CL:0000765,3.21e-10,2;CL:0000050,3.21e-10,2;CL:0000038,3.21e-10,2;CL:0000558,3.21e-10,2;CL:0000547,3.21e-10,2;CL:0000549,3.21e-10,2;CL:0000550,3.21e-10,2;CL:0000552,3.21e-10,2;CL:0000771,1.23e-09,2;CL:0002032,5.15e-09,161;CL:0000837,5.15e-09,161;CL:0000763,2.50e-08,108;CL:0000049,2.50e-08,108;CL:0000738,3.36e-08,136 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.17e-28!102;UBERON:0003061!2.17e-28!102;UBERON:0002193!1.20e-24!112;UBERON:0000178!5.21e-19!15;UBERON:0000179!5.21e-19!15;UBERON:0000463!5.21e-19!15;UBERON:0002371!4.49e-13!80;UBERON:0001474!1.31e-11!86;UBERON:0002405!1.11e-10!115;UBERON:0003081!4.13e-09!216;UBERON:0004765!9.32e-09!101;UBERON:0001434!9.32e-09!101 | |ontology_enrichment_uberon=UBERON:0002390!2.17e-28!102;UBERON:0003061!2.17e-28!102;UBERON:0002193!1.20e-24!112;UBERON:0000178!5.21e-19!15;UBERON:0000179!5.21e-19!15;UBERON:0000463!5.21e-19!15;UBERON:0002371!4.49e-13!80;UBERON:0001474!1.31e-11!86;UBERON:0002405!1.11e-10!115;UBERON:0003081!4.13e-09!216;UBERON:0004765!9.32e-09!101;UBERON:0001434!9.32e-09!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.74e-39;15!UBERON:0000179;5.74e-39;15!UBERON:0000463;5.74e-39;15!UBERON:0002390;3.61e-25;32!UBERON:0002193;1.92e-12;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.74e-39;15!UBERON:0000179;5.74e-39;15!UBERON:0000463;5.74e-39;15!UBERON:0002390;3.61e-25;32!UBERON:0002193;1.92e-12;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.65e-39,15;UBERON:0000179,5.65e-39,15;UBERON:0000463,5.65e-39,15;UBERON:0002390,9.25e-11,98;UBERON:0003061,9.25e-11,98;UBERON:0002193,2.23e-09,108 | |||
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| ||
|short_description=p1@CLC | |short_description=p1@CLC | ||
}} | }} |
Latest revision as of 00:15, 18 September 2015
Short description: | p1@CLC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CLC_5end |
Coexpression cluster: | C3788_Reticulocytes_Neutrophils_Basophils_Whole_CD34_Eosinophils_chronic |
Association with transcript: | 22bp_to_ENST00000221804, uc002omh.2_5end |
EntrezGene: | CLC |
HGNC: | 2014 |
UniProt: | Q05315 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.42e-33 | 8 |
blood cell | 4.72e-24 | 11 |
neutrophil | 5.47e-14 | 3 |
basophil | 1.88e-13 | 3 |
single nucleate cell | 6.56e-13 | 3 |
mononuclear cell | 6.56e-13 | 3 |
hematopoietic stem cell | 1.62e-12 | 168 |
hematopoietic cell | 1.47e-11 | 177 |
erythroid lineage cell | 3.21e-10 | 2 |
erythroblast | 3.21e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 3.21e-10 | 2 |
erythroid progenitor cell | 3.21e-10 | 2 |
reticulocyte | 3.21e-10 | 2 |
proerythroblast | 3.21e-10 | 2 |
basophilic erythroblast | 3.21e-10 | 2 |
polychromatophilic erythroblast | 3.21e-10 | 2 |
orthochromatic erythroblast | 3.21e-10 | 2 |
eosinophil | 1.23e-09 | 2 |
hematopoietic oligopotent progenitor cell | 5.15e-09 | 161 |
hematopoietic multipotent progenitor cell | 5.15e-09 | 161 |
myeloid cell | 2.50e-08 | 108 |
common myeloid progenitor | 2.50e-08 | 108 |
leukocyte | 3.36e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
blood | 5.65e-39 | 15 |
haemolymphatic fluid | 5.65e-39 | 15 |
organism substance | 5.65e-39 | 15 |
hematopoietic system | 9.25e-11 | 98 |
blood island | 9.25e-11 | 98 |
hemolymphoid system | 2.23e-09 | 108 |