FFCP PHASE1:Hg19::chr19:40228657..40228674,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1178 | |EntrezGene=1178 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2014 | |HGNC=2014 | ||
|TSSclassifier=strong | |||
|UniProt=Q05315,C5HZ13 | |UniProt=Q05315,C5HZ13 | ||
|association_with_transcript=0bp_to_ENST00000221804,NM_001828,uc002omh.2_5end | |association_with_transcript=0bp_to_ENST00000221804,NM_001828,uc002omh.2_5end | ||
|cluster_id=chr19:40228657..40228674,- | |||
|coexpression_cluster_id=C3788 | |coexpression_cluster_id=C3788 | ||
|description=CAGE_peak_2_at_CLC_5end | |description=CAGE_peak_2_at_CLC_5end | ||
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|ontology_enrichment_celltype=CL:0000037!4.88e-30!172;CL:0000566!4.88e-30!172;CL:0000988!5.95e-28!182;CL:0000738!1.88e-26!140;CL:0002032!2.28e-26!165;CL:0000837!2.28e-26!165;CL:0000766!6.07e-24!76;CL:0002057!2.23e-23!42;CL:0000763!3.41e-23!112;CL:0000049!3.41e-23!112;CL:0002087!2.48e-22!119;CL:0000860!3.80e-21!45;CL:0002031!1.02e-19!124;CL:0002194!5.09e-18!63;CL:0000576!5.09e-18!63;CL:0000040!5.09e-18!63;CL:0000559!5.09e-18!63;CL:0000839!7.01e-18!70;CL:0002009!3.89e-17!65;CL:0000557!8.46e-15!71;CL:0000094!3.03e-13!8;CL:0000081!4.89e-09!11;CL:0002393!5.07e-07!9;CL:0002397!5.07e-07!9 | |ontology_enrichment_celltype=CL:0000037!4.88e-30!172;CL:0000566!4.88e-30!172;CL:0000988!5.95e-28!182;CL:0000738!1.88e-26!140;CL:0002032!2.28e-26!165;CL:0000837!2.28e-26!165;CL:0000766!6.07e-24!76;CL:0002057!2.23e-23!42;CL:0000763!3.41e-23!112;CL:0000049!3.41e-23!112;CL:0002087!2.48e-22!119;CL:0000860!3.80e-21!45;CL:0002031!1.02e-19!124;CL:0002194!5.09e-18!63;CL:0000576!5.09e-18!63;CL:0000040!5.09e-18!63;CL:0000559!5.09e-18!63;CL:0000839!7.01e-18!70;CL:0002009!3.89e-17!65;CL:0000557!8.46e-15!71;CL:0000094!3.03e-13!8;CL:0000081!4.89e-09!11;CL:0002393!5.07e-07!9;CL:0002397!5.07e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000094;1.74e-29;8!CL:0000081;4.73e-21;11!CL:0000775;1.81e-12;3!CL:0000767;6.74e-12;3!CL:0000226;1.58e-11;3!CL:0000842;1.58e-11;3!CL:0000764;4.83e-09;2!CL:0000558;4.83e-09;2!CL:0000771;1.36e-08;2!CL:0000763;9.39e-07;100 | |ontology_enrichment_celltype_v019=CL:0000094;1.74e-29;8!CL:0000081;4.73e-21;11!CL:0000775;1.81e-12;3!CL:0000767;6.74e-12;3!CL:0000226;1.58e-11;3!CL:0000842;1.58e-11;3!CL:0000764;4.83e-09;2!CL:0000558;4.83e-09;2!CL:0000771;1.36e-08;2!CL:0000763;9.39e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000094,1.81e-29,8;CL:0000081,4.86e-21,11;CL:0000037,3.37e-17,168;CL:0000763,4.41e-17,108;CL:0000049,4.41e-17,108;CL:0000766,5.64e-16,72;CL:0000988,6.65e-16,177;CL:0002032,2.37e-13,161;CL:0000837,2.37e-13,161;CL:0000738,4.64e-13,136;CL:0000775,1.81e-12,3;CL:0000767,7.13e-12,3;CL:0000226,1.53e-11,3;CL:0000842,1.53e-11,3;CL:0000764,4.83e-09,2;CL:0000765,4.83e-09,2;CL:0000050,4.83e-09,2;CL:0000038,4.83e-09,2;CL:0000558,4.83e-09,2;CL:0000547,4.83e-09,2;CL:0000549,4.83e-09,2;CL:0000550,4.83e-09,2;CL:0000552,4.83e-09,2;CL:0000771,1.34e-08,2;CL:0000839,4.36e-08,66;CL:0002087,6.20e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000049;8.24e-07;108 | |ontology_enrichment_development_v019=CL:0000049;8.24e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.68e-27!102;UBERON:0003061!2.68e-27!102;UBERON:0002193!2.28e-24!112;UBERON:0000178!2.12e-16!15;UBERON:0000179!2.12e-16!15;UBERON:0000463!2.12e-16!15;UBERON:0002371!5.07e-13!80;UBERON:0001474!2.13e-11!86;UBERON:0002405!9.34e-11!115;UBERON:0004765!1.57e-09!101;UBERON:0001434!1.57e-09!101;UBERON:0003081!1.95e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!2.68e-27!102;UBERON:0003061!2.68e-27!102;UBERON:0002193!2.28e-24!112;UBERON:0000178!2.12e-16!15;UBERON:0000179!2.12e-16!15;UBERON:0000463!2.12e-16!15;UBERON:0002371!5.07e-13!80;UBERON:0001474!2.13e-11!86;UBERON:0002405!9.34e-11!115;UBERON:0004765!1.57e-09!101;UBERON:0001434!1.57e-09!101;UBERON:0003081!1.95e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.90e-34;15!UBERON:0000179;4.90e-34;15!UBERON:0000463;4.90e-34;15!UBERON:0002390;1.20e-21;32!UBERON:0002193;1.16e-10;42 | |ontology_enrichment_uberon_v019=UBERON:0000178;4.90e-34;15!UBERON:0000179;4.90e-34;15!UBERON:0000463;4.90e-34;15!UBERON:0002390;1.20e-21;32!UBERON:0002193;1.16e-10;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.98e-34,15;UBERON:0000179,4.98e-34,15;UBERON:0000463,4.98e-34,15;UBERON:0002390,4.20e-21,98;UBERON:0003061,4.20e-21,98;UBERON:0002193,1.59e-18,108;UBERON:0003081,7.58e-07,203 | |||
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| ||
|short_description=p2@CLC | |short_description=p2@CLC | ||
}} | }} |
Latest revision as of 00:17, 18 September 2015
Short description: | p2@CLC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CLC_5end |
Coexpression cluster: | C3788_Reticulocytes_Neutrophils_Basophils_Whole_CD34_Eosinophils_chronic |
Association with transcript: | 0bp_to_ENST00000221804, NM_001828, uc002omh.2_5end |
EntrezGene: | CLC |
HGNC: | 2014 |
UniProt: | Q05315C5HZ13 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 1.81e-29 | 8 |
blood cell | 4.86e-21 | 11 |
hematopoietic stem cell | 3.37e-17 | 168 |
myeloid cell | 4.41e-17 | 108 |
common myeloid progenitor | 4.41e-17 | 108 |
myeloid leukocyte | 5.64e-16 | 72 |
hematopoietic cell | 6.65e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.37e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.37e-13 | 161 |
leukocyte | 4.64e-13 | 136 |
neutrophil | 1.81e-12 | 3 |
basophil | 7.13e-12 | 3 |
single nucleate cell | 1.53e-11 | 3 |
mononuclear cell | 1.53e-11 | 3 |
erythroid lineage cell | 4.83e-09 | 2 |
erythroblast | 4.83e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 4.83e-09 | 2 |
erythroid progenitor cell | 4.83e-09 | 2 |
reticulocyte | 4.83e-09 | 2 |
proerythroblast | 4.83e-09 | 2 |
basophilic erythroblast | 4.83e-09 | 2 |
polychromatophilic erythroblast | 4.83e-09 | 2 |
orthochromatic erythroblast | 4.83e-09 | 2 |
eosinophil | 1.34e-08 | 2 |
myeloid lineage restricted progenitor cell | 4.36e-08 | 66 |
nongranular leukocyte | 6.20e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
blood | 4.98e-34 | 15 |
haemolymphatic fluid | 4.98e-34 | 15 |
organism substance | 4.98e-34 | 15 |
hematopoietic system | 4.20e-21 | 98 |
blood island | 4.20e-21 | 98 |
hemolymphoid system | 1.59e-18 | 108 |
lateral plate mesoderm | 7.58e-07 | 203 |