FFCP PHASE1:Hg19::chr16:811064..811071,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10232 | |EntrezGene=10232 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7371 | |HGNC=7371 | ||
|TSSclassifier=strong | |||
|UniProt=Q13421 | |UniProt=Q13421 | ||
|association_with_transcript=-1bp_to_NM_013404_5end | |association_with_transcript=-1bp_to_NM_013404_5end | ||
|cluster_id=chr16:811064..811071,+ | |||
|coexpression_cluster_id=C68 | |coexpression_cluster_id=C68 | ||
|description=CAGE_peak_6_at_MSLN_5end | |description=CAGE_peak_6_at_MSLN_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.77e-19!254;CL:0000077!1.77e-13!19;CL:0000076!2.15e-08!62 | |ontology_enrichment_celltype=CL:0000066!1.77e-19!254;CL:0000077!1.77e-13!19;CL:0000076!2.15e-08!62 | ||
|ontology_enrichment_celltype_v019=CL:0000077;4.37e-17;19!CL:0000349;6.06e-14;19!CL:0002577;6.53e-12;3!CL:0002097;2.21e-08;2!CL:0002536;9.40e-08;2!CL:0002537;3.51e-07;5 | |ontology_enrichment_celltype_v019=CL:0000077;4.37e-17;19!CL:0000349;6.06e-14;19!CL:0002577;6.53e-12;3!CL:0002097;2.21e-08;2!CL:0002536;9.40e-08;2!CL:0002537;3.51e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.80e-19,253;CL:0000077,4.09e-17,19;CL:0000349,6.38e-14,19;CL:0002577,7.85e-12,3;CL:0000076,2.79e-10,63;CL:0002097,2.06e-08,2;CL:0002536,7.14e-08,2;CL:0002537,3.98e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008947;5.70e-20;29 | |ontology_enrichment_development_v019=UBERON:0008947;5.70e-20;29 | ||
|ontology_enrichment_disease=DOID:305!9.54e-14!106;DOID:0050687!2.02e-08!143;DOID:299!2.74e-07!25 | |ontology_enrichment_disease=DOID:305!9.54e-14!106;DOID:0050687!2.02e-08!143;DOID:299!2.74e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.75e-08;2!DOID:4929;9.40e-08;2!DOID:299;1.51e-07;25 | |ontology_enrichment_disease_v019=DOID:3493;2.75e-08;2!DOID:4929;9.40e-08;2!DOID:299;1.51e-07;25 | ||
|ontology_enrichment_disease_v019_2=DOID:305,9.85e-17,106;DOID:0050687,7.36e-13,143;DOID:162,2.56e-10,235;DOID:14566,6.25e-10,239;DOID:3493,3.54e-08,2;DOID:4929,5.03e-08,2;DOID:299,1.42e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.83e-13!9;UBERON:0008947!1.85e-12!38;UBERON:0003258!1.85e-12!38;UBERON:0005631!2.23e-12!14;UBERON:0000158!2.23e-12!14;UBERON:0000064!9.49e-11!219;UBERON:0000464!5.05e-10!104;UBERON:0000077!6.69e-10!130;UBERON:0000062!7.23e-10!511;UBERON:0004119!2.14e-09!169;UBERON:0000925!2.14e-09!169;UBERON:0006595!2.14e-09!169;UBERON:0001041!3.07e-09!98;UBERON:0000466!5.59e-09!126;UBERON:0000058!1.09e-08!26;UBERON:0003124!4.30e-08!7;UBERON:0001007!4.71e-08!155;UBERON:0001555!4.71e-08!155;UBERON:0007026!4.71e-08!155;UBERON:0000065!5.04e-08!53;UBERON:0003887!5.29e-08!21;UBERON:0005177!8.03e-08!107;UBERON:0004921!1.30e-07!129;UBERON:0004185!1.30e-07!129;UBERON:0003886!2.20e-07!63;UBERON:0000080!3.34e-07!18;UBERON:0002120!3.34e-07!18;UBERON:0004875!3.34e-07!18;UBERON:0005721!3.34e-07!18;UBERON:0005754!3.34e-07!18;UBERON:0007297!3.34e-07!18;UBERON:0001987!4.47e-07!4;UBERON:0004340!4.47e-07!4;UBERON:0001004!4.69e-07!72;UBERON:0004175!6.76e-07!25;UBERON:0000072!7.46e-07!46 | |ontology_enrichment_uberon=UBERON:0001737!1.83e-13!9;UBERON:0008947!1.85e-12!38;UBERON:0003258!1.85e-12!38;UBERON:0005631!2.23e-12!14;UBERON:0000158!2.23e-12!14;UBERON:0000064!9.49e-11!219;UBERON:0000464!5.05e-10!104;UBERON:0000077!6.69e-10!130;UBERON:0000062!7.23e-10!511;UBERON:0004119!2.14e-09!169;UBERON:0000925!2.14e-09!169;UBERON:0006595!2.14e-09!169;UBERON:0001041!3.07e-09!98;UBERON:0000466!5.59e-09!126;UBERON:0000058!1.09e-08!26;UBERON:0003124!4.30e-08!7;UBERON:0001007!4.71e-08!155;UBERON:0001555!4.71e-08!155;UBERON:0007026!4.71e-08!155;UBERON:0000065!5.04e-08!53;UBERON:0003887!5.29e-08!21;UBERON:0005177!8.03e-08!107;UBERON:0004921!1.30e-07!129;UBERON:0004185!1.30e-07!129;UBERON:0003886!2.20e-07!63;UBERON:0000080!3.34e-07!18;UBERON:0002120!3.34e-07!18;UBERON:0004875!3.34e-07!18;UBERON:0005721!3.34e-07!18;UBERON:0005754!3.34e-07!18;UBERON:0007297!3.34e-07!18;UBERON:0001987!4.47e-07!4;UBERON:0004340!4.47e-07!4;UBERON:0001004!4.69e-07!72;UBERON:0004175!6.76e-07!25;UBERON:0000072!7.46e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.86e-23;9!UBERON:0001557;6.86e-23;9!UBERON:0000305;1.35e-12;7!UBERON:0005631;1.78e-12;10!UBERON:0000158;1.78e-12;10!UBERON:0000065;2.01e-11;44!UBERON:0000478;1.14e-10;24!UBERON:0000072;5.04e-10;37!UBERON:0001987;4.99e-09;4!UBERON:0001004;1.07e-07;65 | |ontology_enrichment_uberon_v019=UBERON:0001737;6.86e-23;9!UBERON:0001557;6.86e-23;9!UBERON:0000305;1.35e-12;7!UBERON:0005631;1.78e-12;10!UBERON:0000158;1.78e-12;10!UBERON:0000065;2.01e-11;44!UBERON:0000478;1.14e-10;24!UBERON:0000072;5.04e-10;37!UBERON:0001987;4.99e-09;4!UBERON:0001004;1.07e-07;65 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.95e-23,9;UBERON:0005631,1.56e-19,14;UBERON:0000158,1.56e-19,14;UBERON:0008947,8.53e-17,38;UBERON:0003258,8.53e-17,38;UBERON:0000305,1.29e-12,7;UBERON:0004871,5.38e-11,8;UBERON:0000065,8.80e-11,54;UBERON:0000478,1.18e-10,24;UBERON:0001557,3.59e-10,19;UBERON:0001004,2.96e-09,74;UBERON:0001987,5.71e-09,4;UBERON:0004340,5.71e-09,4;UBERON:0003124,9.16e-09,7;UBERON:0001041,2.21e-08,87;UBERON:0000072,8.24e-08,47 | |||
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|short_description=p6@MSLN | |short_description=p6@MSLN | ||
}} | }} |
Latest revision as of 00:38, 18 September 2015
Short description: | p6@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MSLN_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | -1bp_to_NM_013404_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | Q13421 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.80e-19 | 253 |
mesothelial cell | 4.09e-17 | 19 |
extraembryonic cell | 6.38e-14 | 19 |
placental epithelial cell | 7.85e-12 | 3 |
squamous epithelial cell | 2.79e-10 | 63 |
cortical cell of adrenal gland | 2.06e-08 | 2 |
amniotic epithelial cell | 7.14e-08 | 2 |
amnion mesenchymal stem cell | 3.98e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.95e-23 | 9 |
extraembryonic membrane | 1.56e-19 | 14 |
membranous layer | 1.56e-19 | 14 |
respiratory primordium | 8.53e-17 | 38 |
endoderm of foregut | 8.53e-17 | 38 |
amnion | 1.29e-12 | 7 |
somatic layer of lateral plate mesoderm | 5.38e-11 | 8 |
respiratory tract | 8.80e-11 | 54 |
extraembryonic structure | 1.18e-10 | 24 |
upper respiratory tract | 3.59e-10 | 19 |
respiratory system | 2.96e-09 | 74 |
placenta | 5.71e-09 | 4 |
allantois | 5.71e-09 | 4 |
chorion | 9.16e-09 | 7 |
foregut | 2.21e-08 | 87 |
segment of respiratory tract | 8.24e-08 | 47 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 9.85e-17 | 106 |
cell type cancer | 7.36e-13 | 143 |
cancer | 2.56e-10 | 235 |
disease of cellular proliferation | 6.25e-10 | 239 |
signet ring cell adenocarcinoma | 3.54e-08 | 2 |
tubular adenocarcinoma | 5.03e-08 | 2 |
adenocarcinoma | 1.42e-07 | 25 |