FFCP PHASE1:Hg19::chr3:35683102..35683115,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10777 | |EntrezGene=10777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |HGNC=16968 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQQ6 | |UniProt=C9JQQ6 | ||
|association_with_transcript=189bp_to_ENST00000449196_5end | |association_with_transcript=189bp_to_ENST00000449196_5end | ||
|cluster_id=chr3:35683102..35683115,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_30_at_ARPP21_5end | |description=CAGE_peak_30_at_ARPP21_5end | ||
|id=chr3:35683102..35683115,+ | |id=chr3:35683102..35683115,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000817;3.16e-29;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,9.90e-11,3 | |||
|ontology_enrichment_development_v019=UBERON:0006965;2.37e-15;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!2.34e-25!22;UBERON:0001049!5.21e-24!57;UBERON:0005068!5.21e-24!57;UBERON:0006241!5.21e-24!57;UBERON:0007135!5.21e-24!57;UBERON:0002020!2.93e-23!34;UBERON:0003528!2.93e-23!34;UBERON:0002616!4.22e-23!59;UBERON:0001017!1.01e-22!82;UBERON:0000956!3.10e-22!25;UBERON:0000203!3.10e-22!25;UBERON:0000955!1.27e-21!69;UBERON:0006238!1.27e-21!69;UBERON:0005743!1.64e-21!86;UBERON:0000073!1.94e-21!94;UBERON:0001016!1.94e-21!94;UBERON:0001869!8.70e-21!32;UBERON:0002791!4.07e-20!33;UBERON:0001893!1.74e-19!34;UBERON:0001950!8.44e-18!20;UBERON:0002346!3.65e-16!90;UBERON:0002780!6.62e-16!41;UBERON:0001890!6.62e-16!41;UBERON:0006240!6.62e-16!41;UBERON:0007023!1.68e-15!115;UBERON:0003080!1.73e-15!42;UBERON:0003075!6.27e-15!86;UBERON:0007284!6.27e-15!86;UBERON:0000153!6.34e-15!129;UBERON:0007811!6.34e-15!129;UBERON:0001954!9.83e-14!2;UBERON:0003022!9.83e-14!2;UBERON:0002421!9.83e-14!2;UBERON:0002600!9.83e-14!2;UBERON:0004733!1.20e-12!12;UBERON:0002028!1.20e-12!12;UBERON:0007277!1.20e-12!12;UBERON:0000033!2.55e-12!123;UBERON:0000349!6.54e-12!5;UBERON:0004732!1.16e-11!13;UBERON:0000924!2.88e-11!173;UBERON:0006601!2.88e-11!173;UBERON:0002680!3.62e-11!9;UBERON:0001895!3.62e-11!9;UBERON:0010092!3.62e-11!9;UBERON:0004121!2.52e-10!169;UBERON:0003056!3.91e-10!61;UBERON:0003076!4.41e-10!15;UBERON:0003057!4.41e-10!15;UBERON:0000988!5.13e-09!3;UBERON:0005418!8.28e-08!1;UBERON:0001389!8.28e-08!1;UBERON:0000026!8.28e-08!1;UBERON:0008784!8.28e-08!1;UBERON:0006058!8.28e-08!1;UBERON:0003663!8.28e-08!1;UBERON:0001383!8.28e-08!1;UBERON:0004256!8.28e-08!1;UBERON:0002529!8.28e-08!1;UBERON:0004708!8.28e-08!1;UBERON:0002101!8.28e-08!1;UBERON:0004709!8.28e-08!1;UBERON:0003661!8.28e-08!1;UBERON:0002471!8.28e-08!1;UBERON:0004357!8.28e-08!1;UBERON:0009872!8.28e-08!1;UBERON:0004347!8.28e-08!1;UBERON:0005420!8.28e-08!1;UBERON:0005732!8.28e-08!1;UBERON:0006057!8.28e-08!1;UBERON:0000978!8.28e-08!1;UBERON:0002103!8.28e-08!1;UBERON:0001665!8.28e-08!1;UBERON:0003823!8.28e-08!1;UBERON:0000154!8.28e-08!1;UBERON:0005733!8.28e-08!1;UBERON:0005730!8.28e-08!1;UBERON:0002370!1.19e-07!4;UBERON:0005058!1.19e-07!4;UBERON:0009113!1.19e-07!4;UBERON:0003295!1.19e-07!4;UBERON:0005562!1.19e-07!4;UBERON:0003112!1.30e-07!1;UBERON:0000032!1.30e-07!1;UBERON:0005253!1.30e-07!1;UBERON:0003128!1.30e-07!1;UBERON:0002241!1.30e-07!1;UBERON:0001703!1.30e-07!1;UBERON:0004761!1.30e-07!1;UBERON:0009617!1.30e-07!1;UBERON:0001871!1.37e-07!7;UBERON:0001882!1.80e-07!1;UBERON:0005403!1.80e-07!1;UBERON:0002298!2.35e-07!8;UBERON:0002902!2.80e-07!1;UBERON:0009899!2.80e-07!1;UBERON:0002022!3.17e-07!1 | |ontology_enrichment_uberon=UBERON:0002619!2.34e-25!22;UBERON:0001049!5.21e-24!57;UBERON:0005068!5.21e-24!57;UBERON:0006241!5.21e-24!57;UBERON:0007135!5.21e-24!57;UBERON:0002020!2.93e-23!34;UBERON:0003528!2.93e-23!34;UBERON:0002616!4.22e-23!59;UBERON:0001017!1.01e-22!82;UBERON:0000956!3.10e-22!25;UBERON:0000203!3.10e-22!25;UBERON:0000955!1.27e-21!69;UBERON:0006238!1.27e-21!69;UBERON:0005743!1.64e-21!86;UBERON:0000073!1.94e-21!94;UBERON:0001016!1.94e-21!94;UBERON:0001869!8.70e-21!32;UBERON:0002791!4.07e-20!33;UBERON:0001893!1.74e-19!34;UBERON:0001950!8.44e-18!20;UBERON:0002346!3.65e-16!90;UBERON:0002780!6.62e-16!41;UBERON:0001890!6.62e-16!41;UBERON:0006240!6.62e-16!41;UBERON:0007023!1.68e-15!115;UBERON:0003080!1.73e-15!42;UBERON:0003075!6.27e-15!86;UBERON:0007284!6.27e-15!86;UBERON:0000153!6.34e-15!129;UBERON:0007811!6.34e-15!129;UBERON:0001954!9.83e-14!2;UBERON:0003022!9.83e-14!2;UBERON:0002421!9.83e-14!2;UBERON:0002600!9.83e-14!2;UBERON:0004733!1.20e-12!12;UBERON:0002028!1.20e-12!12;UBERON:0007277!1.20e-12!12;UBERON:0000033!2.55e-12!123;UBERON:0000349!6.54e-12!5;UBERON:0004732!1.16e-11!13;UBERON:0000924!2.88e-11!173;UBERON:0006601!2.88e-11!173;UBERON:0002680!3.62e-11!9;UBERON:0001895!3.62e-11!9;UBERON:0010092!3.62e-11!9;UBERON:0004121!2.52e-10!169;UBERON:0003056!3.91e-10!61;UBERON:0003076!4.41e-10!15;UBERON:0003057!4.41e-10!15;UBERON:0000988!5.13e-09!3;UBERON:0005418!8.28e-08!1;UBERON:0001389!8.28e-08!1;UBERON:0000026!8.28e-08!1;UBERON:0008784!8.28e-08!1;UBERON:0006058!8.28e-08!1;UBERON:0003663!8.28e-08!1;UBERON:0001383!8.28e-08!1;UBERON:0004256!8.28e-08!1;UBERON:0002529!8.28e-08!1;UBERON:0004708!8.28e-08!1;UBERON:0002101!8.28e-08!1;UBERON:0004709!8.28e-08!1;UBERON:0003661!8.28e-08!1;UBERON:0002471!8.28e-08!1;UBERON:0004357!8.28e-08!1;UBERON:0009872!8.28e-08!1;UBERON:0004347!8.28e-08!1;UBERON:0005420!8.28e-08!1;UBERON:0005732!8.28e-08!1;UBERON:0006057!8.28e-08!1;UBERON:0000978!8.28e-08!1;UBERON:0002103!8.28e-08!1;UBERON:0001665!8.28e-08!1;UBERON:0003823!8.28e-08!1;UBERON:0000154!8.28e-08!1;UBERON:0005733!8.28e-08!1;UBERON:0005730!8.28e-08!1;UBERON:0002370!1.19e-07!4;UBERON:0005058!1.19e-07!4;UBERON:0009113!1.19e-07!4;UBERON:0003295!1.19e-07!4;UBERON:0005562!1.19e-07!4;UBERON:0003112!1.30e-07!1;UBERON:0000032!1.30e-07!1;UBERON:0005253!1.30e-07!1;UBERON:0003128!1.30e-07!1;UBERON:0002241!1.30e-07!1;UBERON:0001703!1.30e-07!1;UBERON:0004761!1.30e-07!1;UBERON:0009617!1.30e-07!1;UBERON:0001871!1.37e-07!7;UBERON:0001882!1.80e-07!1;UBERON:0005403!1.80e-07!1;UBERON:0002298!2.35e-07!8;UBERON:0002902!2.80e-07!1;UBERON:0009899!2.80e-07!1;UBERON:0002022!3.17e-07!1 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.13e-57;2!UBERON:0005058;1.13e-57;2!UBERON:0009113;1.13e-57;2!UBERON:0004177;8.09e-24;5!UBERON:0005057;8.09e-24;5!UBERON:0002021;5.54e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.78e-29,4;UBERON:0005058,1.78e-29,4;UBERON:0009113,1.78e-29,4;UBERON:0003295,1.78e-29,4;UBERON:0005562,1.78e-29,4;UBERON:0003351,4.86e-20,6;UBERON:0004177,2.46e-17,7;UBERON:0005057,2.46e-17,7;UBERON:0000974,1.89e-12,10;UBERON:0003408,1.89e-12,10;UBERON:0001042,1.89e-12,10;UBERON:0009145,1.89e-12,10;UBERON:0006562,2.07e-11,11;UBERON:0009722,2.07e-11,11;UBERON:0007690,2.07e-11,11;UBERON:0008814,2.44e-07,18;UBERON:0001557,5.34e-07,19;UBERON:0002021,5.38e-07,5 | |||
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|short_description=p30@ARPP21 | |short_description=p30@ARPP21 | ||
}} | }} |
Latest revision as of 01:11, 18 September 2015
Short description: | p30@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_ARPP21_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 189bp_to_ENST00000449196_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | C9JQQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 9.90e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.78e-29 | 4 |
hemolymphoid system gland | 1.78e-29 | 4 |
thymic region | 1.78e-29 | 4 |
pharyngeal gland | 1.78e-29 | 4 |
thymus primordium | 1.78e-29 | 4 |
pharyngeal epithelium | 4.86e-20 | 6 |
hemopoietic organ | 2.46e-17 | 7 |
immune organ | 2.46e-17 | 7 |
neck | 1.89e-12 | 10 |
gland of gut | 1.89e-12 | 10 |
chordate pharynx | 1.89e-12 | 10 |
pharyngeal region of foregut | 1.89e-12 | 10 |
pharynx | 2.07e-11 | 11 |
entire pharyngeal arch endoderm | 2.07e-11 | 11 |
early pharyngeal endoderm | 2.07e-11 | 11 |
pharyngeal arch system | 2.44e-07 | 18 |
upper respiratory tract | 5.34e-07 | 19 |
occipital lobe | 5.38e-07 | 5 |