FFCP PHASE1:Hg19::chr15:52201692..52201696,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29766 | |EntrezGene=29766 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11873 | |HGNC=11873 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-89bp_to_uc002abn.2_5end | |association_with_transcript=-89bp_to_uc002abn.2_5end | ||
|cluster_id=chr15:52201692..52201696,+ | |||
|description=CAGE_peak_6_at_TMOD3_5end | |description=CAGE_peak_6_at_TMOD3_5end | ||
|id=chr15:52201692..52201696,+ | |id=chr15:52201692..52201696,+ | ||
|ontology_enrichment_celltype=CL:0002541;3.98e-15;3!CL:0000511;9.10e-12;1!CL:0002625;9.10e-12;1!CL:0000216;9.10e-12;1!CL:0002537;2.79e-09;5!CL:0000349;4.36e-09;19 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0002541;3.98e-15;3!CL:0000511;9.10e-12;1!CL:0002625;9.10e-12;1!CL:0000216;9.10e-12;1!CL:0002537;2.79e-09;5!CL:0000349;4.36e-09;19 | ||
|ontology_enrichment_disease=DOID:3112;9.10e-12;1 | |ontology_enrichment_celltype_v019_2=CL:0002541,2.26e-15,3;CL:0000511,6.26e-12,1;CL:0002625,6.26e-12,1;CL:0000216,6.26e-12,1;CL:0002537,4.06e-09,5;CL:0000349,4.45e-09,19 | ||
|ontology_enrichment_uberon=UBERON:0005631;4.65e-17;10!UBERON:0000158;4.65e-17;10!UBERON:0003124;3.98e-15;3!UBERON:0000920;3.98e-15;3!UBERON:0000989;9.10e-12;1!UBERON:0001136;9.10e-12;1!UBERON:0001343;9.10e-12;1!UBERON:0008811;9.10e-12;1!UBERON:0004910;9.10e-12;1!UBERON:0004813;9.10e-12;1!UBERON:0003101;7.16e-08;22!UBERON:0000079;7.16e-08;22!UBERON:0000490;9.70e-08;33!UBERON:0000478;3.15e-07;24!UBERON:0000305;7.19e-07;7 | |ontology_enrichment_development_v019=UBERON:0004874;9.10e-12;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;9.10e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,5.05e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.63e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;4.65e-17;10!UBERON:0000158;4.65e-17;10!UBERON:0003124;3.98e-15;3!UBERON:0000920;3.98e-15;3!UBERON:0000989;9.10e-12;1!UBERON:0001136;9.10e-12;1!UBERON:0001343;9.10e-12;1!UBERON:0008811;9.10e-12;1!UBERON:0004910;9.10e-12;1!UBERON:0004813;9.10e-12;1!UBERON:0003101;7.16e-08;22!UBERON:0000079;7.16e-08;22!UBERON:0000490;9.70e-08;33!UBERON:0000478;3.15e-07;24!UBERON:0000305;7.19e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,2.26e-15,3;UBERON:0005631,3.02e-12,14;UBERON:0000158,3.02e-12,14;UBERON:0004871,3.25e-12,8;UBERON:0001136,6.26e-12,1;UBERON:0001343,6.26e-12,1;UBERON:0004910,6.26e-12,1;UBERON:0005154,6.26e-12,1;UBERON:0005295,6.26e-12,1;UBERON:0004813,6.26e-12,1;UBERON:0005297,6.26e-12,1;UBERON:0005294,6.26e-12,1;UBERON:0010141,6.26e-12,1;UBERON:0005891,6.26e-12,1;UBERON:0000989,8.64e-12,1;UBERON:0008811,8.64e-12,1;UBERON:0006258,8.64e-12,1;UBERON:0005876,8.64e-12,1;UBERON:0004874,8.64e-12,1;UBERON:0003101,6.91e-08,22;UBERON:0000079,6.91e-08,22;UBERON:0000478,3.21e-07,24;UBERON:0003124,4.33e-07,7;UBERON:0004122,6.77e-07,15;UBERON:0000305,9.38e-07,7 | |||
|phase1_expression=0.726713517082227,0.428201047781966,0,0,0,0,0,0,0,0.245733936501509,0,0.436882744260345,0,0.495065411840187,0,2.01697543935533,0,0,0.975865597581014,0,0.204000691244253,0,0,0,0.125542639594803,0.229240217243854,0,0.0787107813136792,0,0,0.309632246632152,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0.232429036905685,0.411167888021826,0,0.863077176966451,0.768482119587302,0,0,0,0,0.941211697713023,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0.659702600373432,0.199463657621632,0,0.580418477257168,0,0,0.502497330513487,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0.425208599930087,0.209658645508376,0.336985893439485,0,0.16072558669708,0.570025487482497,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0.393010762749165,0.205601498999509,0.167186495390678,0.651844533267181,0,0,0.222820913770347,0,0.443067789167242,0,0.384273959177026,0.130059347559878,0,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.579386075843295,0,0.973269740605272,0.283604451492204,0.221729397462564,0.087834785693126,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,1.10047216776027,0,0.516833518338658,0,0.33472061276467,0.402829317109147,0,0.732186172644509,0.367663080345869,1.62028389576352,0.267899184852239,0,0,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0.298897361103602,0,0,0.421352420106746,0.204154171254893,0.368502951935304,0.103325781175765,1.18800285728205,0.494533858557114,0,0,0.673344455816265,0.250237039743928,0.277064115484183,0,0.30648779579902,0,0.567160915800105,0.179389635688862,0,0,0.600182192168805,0.103052529238439,0.257640540045629,0,0,0,0,0.184099797284599,0.646584227275248,0,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0.265059536642971,0.232387885739037,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0.946454400318751,0.842923450390509,0.482022059766964,0.772057809126758,1.08939722046203,0.474541238222193,0.674156540800822,0.196221465125346,1.53898862778556,0,0,0,0,0,0.982827216677626,0,0,0,0.343135620597051,0.439001141634502,0,0.502644862058154,0.555530670951178,0.325808305310325,0,1.44331342025273,0,0,0,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0,0.148631162288728,0.93733833986777,0.16798212819886,0.283550194484773,0.358234090811393,0.871901815541886,0,0,0.352193736052904,0,0.432359860250884,0,0.317489471460845,0,0,0,0.411309970813294,0.300343057843917,0,0.112131084345361,0,0.4400297149257,0,0,0,0.531876233169741,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0.299918973546171,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0.358121926479791,0.224170287987055,0.788123040807709,0,0.256686072559497,0,0,0,0.335032530668698,0.637938751653163,0,8.97484377612075,0,0.24538298343828,0,0,0,0.713715955188647,0.788512075169673,0.468565659970853,0,0,0,0.664225598535437,0,0.173767228936166,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0.384417447767103,0,0.64341568457443,0,0.771048469013278,0.177561725313127,0.246381468041427,0.519254429183621,0.116210378459959,0.120859449591622,0.40101294060657,2.02578175658972,0.34444334449382,0,0.131124414959424,0,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0.522870902049801,0.256450125116389,0,0,0,0,0.165018999841176,0,0.650060246036521,1.6068392984416,0,0,0,0.137836572484531,0.214840489736547,0.435050081742686,0.0852266274161009,0.178064071293475,0.826424576804891,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0.487426979262569,0,0.545999645631943,0.282810863907425,0,0,0,0.438450885253763,0,0,0,0,0,0,0.196498082026242,0,0,0.422215270595328,0.329294892959902,0,0,0.192444225451024,0,0,0,0,0,0,0.689170200620878,0.507447609232169,0,0.569647187174163,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0,0,0.245040215981032,0.371606350251437,0,0,0.318852545457645,0,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0.334330152832435,0.284136146806413,0.71623345421307,0.890894042497916,1.22864280839693,0,0.140669416410513,0.333926115068718,0,0,0,0,0.503865495708552,0.306806047506464,0,0,0.359473404589307,0.358042349351218,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0.1137934482855,0.254253650292766,0.472775363535873,0,0.291604613383254,0,0,0,0,0.221158519862449,0,0.219385397153973,0.21787692703798,0.557694977114413,0.230850775511391,0,0,0.269272933229316,0,1.91400695839152,0.274792780205587,2.66517388009317,0,0,0.166211681900156,0,0,0.167821586975843,0,0,0.421996129056054,0.163232808159148,0.282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| ||
|short_description=p6@TMOD3 | |short_description=p6@TMOD3 | ||
}} | }} |
Latest revision as of 01:41, 18 September 2015
Short description: | p6@TMOD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMOD3_5end |
Coexpression cluster: | NA |
Association with transcript: | -89bp_to_uc002abn.2_5end |
EntrezGene: | TMOD3 |
HGNC: | 11873 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.26e-15 | 3 |
androgen binding protein secreting cell | 6.26e-12 | 1 |
seminiferous tubule epithelial cell | 6.26e-12 | 1 |
Sertoli cell | 6.26e-12 | 1 |
amnion mesenchymal stem cell | 4.06e-09 | 5 |
extraembryonic cell | 4.45e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 2.26e-15 | 3 |
extraembryonic membrane | 3.02e-12 | 14 |
membranous layer | 3.02e-12 | 14 |
somatic layer of lateral plate mesoderm | 3.25e-12 | 8 |
mesothelium | 6.26e-12 | 1 |
seminiferous tubule of testis | 6.26e-12 | 1 |
epithelium of male gonad | 6.26e-12 | 1 |
epithelial cord | 6.26e-12 | 1 |
sex cord | 6.26e-12 | 1 |
seminiferous tubule epithelium | 6.26e-12 | 1 |
testis sex cord | 6.26e-12 | 1 |
genital ridge | 6.26e-12 | 1 |
primitive sex cord of indifferent gonad | 6.26e-12 | 1 |
coelomic epithelium | 6.26e-12 | 1 |
penis | 8.64e-12 | 1 |
intromittent organ | 8.64e-12 | 1 |
lateral plate mesenchyme | 8.64e-12 | 1 |
undifferentiated genital tubercle | 8.64e-12 | 1 |
somatopleure | 8.64e-12 | 1 |
male organism | 6.91e-08 | 22 |
male reproductive system | 6.91e-08 | 22 |
extraembryonic structure | 3.21e-07 | 24 |
chorion | 4.33e-07 | 7 |
genitourinary system | 6.77e-07 | 15 |
amnion | 9.38e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 5.05e-12 | 1 |