FFCP PHASE1:Hg19::chr5:49739173..49739184,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=133418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30465 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-91bp_to_ENST00000506190_5end | |||
|cluster_id=chr5:49739173..49739184,- | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_8_at_EMB_5end | |||
|id=chr5:49739173..49739184,- | |||
|ontology_enrichment_celltype=CL:0000775!3.27e-18!3;CL:0000763!1.08e-17!112;CL:0000049!1.08e-17!112;CL:0000037!9.33e-14!172;CL:0000566!9.33e-14!172;CL:0000988!1.00e-12!182;CL:0002032!8.08e-12!165;CL:0000837!8.08e-12!165;CL:0000766!1.54e-11!76;CL:0000557!5.87e-09!71;CL:0002194!1.35e-08!63;CL:0000576!1.35e-08!63;CL:0000040!1.35e-08!63;CL:0000559!1.35e-08!63;CL:0002009!2.83e-08!65;CL:0000839!1.50e-07!70;CL:0002057!2.95e-07!42;CL:0000094!4.09e-07!8;CL:0000738!7.30e-07!140;CL:0001024!7.57e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000775;5.67e-27;3!CL:0002032;5.71e-21;1!CL:0000557;5.71e-21;1!CL:0000094;9.12e-11;8!CL:0000081;4.42e-08;11!CL:0000763;4.13e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,4.65e-27,3;CL:0000763,2.43e-14,108;CL:0000049,2.43e-14,108;CL:0000094,8.47e-11,8;CL:0002032,1.69e-09,161;CL:0000837,1.69e-09,161;CL:0000037,4.41e-09,168;CL:0000988,1.35e-08,177;CL:0000081,4.18e-08,11;CL:0000766,6.15e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.06e-13!31;DOID:1240!1.42e-10!39;DOID:2531!1.76e-09!51;DOID:0060083!1.76e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.42e-22;31!DOID:1240;3.53e-14;39!DOID:2531;1.79e-07;51!DOID:0060083;1.79e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.43e-23,31;DOID:1240,2.35e-18,39;DOID:2531,4.93e-14,51;DOID:0060083,4.93e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!3.85e-12!112;UBERON:0002390!5.02e-12!102;UBERON:0003061!5.02e-12!102;UBERON:0002371!3.81e-09!80;UBERON:0002405!6.01e-09!115;UBERON:0001474!2.44e-08!86;UBERON:0000029!5.69e-07!1;UBERON:0004765!9.57e-07!101;UBERON:0001434!9.57e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0.561643155732475,0.300353785683013,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89722493252585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,2.99161459204025,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0.5745161103971,0,0.324621940274555,0,0,0,0,0,0,0.201799707191048,6.81353980304522,0,26.1154649662189,40.4853755285273,33.0361300589579,2.34465714482448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.9050329579405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691743174681154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p8@EMB | |||
}} |
Latest revision as of 01:42, 18 September 2015
Short description: | p8@EMB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_EMB_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | -91bp_to_ENST00000506190_5end |
EntrezGene: | EMB |
HGNC: | 30465 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 4.65e-27 | 3 |
myeloid cell | 2.43e-14 | 108 |
common myeloid progenitor | 2.43e-14 | 108 |
granulocyte | 8.47e-11 | 8 |
hematopoietic oligopotent progenitor cell | 1.69e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-09 | 161 |
hematopoietic stem cell | 4.41e-09 | 168 |
hematopoietic cell | 1.35e-08 | 177 |
blood cell | 4.18e-08 | 11 |
myeloid leukocyte | 6.15e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.43e-23 | 31 |
leukemia | 2.35e-18 | 39 |
hematologic cancer | 4.93e-14 | 51 |
immune system cancer | 4.93e-14 | 51 |