FFCP PHASE2:Hg19::chr7:27213893..27213954,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3206 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:5100 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3206 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=5100 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P31260,Q5I0Y5 | ||
|association_with_transcript=0bp_to_ENST00000283921,ENST00000381834,NM_018951,uc011jzm.1_5end | |association_with_transcript=0bp_to_ENST00000283921,ENST00000381834,NM_018951,uc011jzm.1_5end | ||
|cluster_id=chr7:27213893..27213954,- | |cluster_id=chr7:27213893..27213954,- |
Latest revision as of 01:58, 18 September 2015
Short description: | p1@HOXA10 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOXA10_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000283921, ENST00000381834, NM_018951, uc011jzm.1_5end |
EntrezGene: | HOXA10 |
HGNC: | 5100 |
UniProt: | P31260Q5I0Y5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@HOXA10 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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kidney tubule cell | 9.70e-10 | 10 |
nephron tubule epithelial cell | 9.70e-10 | 10 |
kidney cell | 1.47e-09 | 17 |
kidney epithelial cell | 1.47e-09 | 17 |
epithelial cell of nephron | 1.69e-09 | 15 |
skin fibroblast | 2.67e-08 | 23 |
kidney cortical cell | 5.98e-07 | 12 |
renal cortical epithelial cell | 5.98e-07 | 12 |
Showing 1 to 8 of 8 entries
Ontology term | p-value | n |
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urinary system structure | 3.50e-16 | 47 |
renal system | 1.36e-15 | 48 |
cavitated compound organ | 4.59e-13 | 31 |
kidney | 1.24e-12 | 26 |
kidney mesenchyme | 1.24e-12 | 26 |
upper urinary tract | 1.24e-12 | 26 |
kidney rudiment | 1.24e-12 | 26 |
kidney field | 1.24e-12 | 26 |
excretory tube | 4.59e-10 | 16 |
kidney epithelium | 4.59e-10 | 16 |
Showing 1 to 10 of 23 entries