FFCP PHASE1:Hg19::chr4:57138437..57138479,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57482 | |EntrezGene=57482 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29219 | |HGNC=29219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_uc010iha.2_5end | |association_with_transcript=-7bp_to_uc010iha.2_5end | ||
|cluster_id=chr4:57138437..57138479,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_KIAA1211_5end | |description=CAGE_peak_1_at_KIAA1211_5end | ||
|id=chr4:57138437..57138479,+ | |id=chr4:57138437..57138479,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;1.26e-25;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001950!2.43e-30!20;UBERON:0001893!3.65e-28!34;UBERON:0002619!1.61e-27!22;UBERON:0001869!6.60e-26!32;UBERON:0002791!4.66e-25!33;UBERON:0007023!6.17e-25!115;UBERON:0000956!4.20e-24!25;UBERON:0000203!4.20e-24!25;UBERON:0002780!5.51e-23!41;UBERON:0001890!5.51e-23!41;UBERON:0006240!5.51e-23!41;UBERON:0003080!2.21e-22!42;UBERON:0002020!1.10e-20!34;UBERON:0003528!1.10e-20!34;UBERON:0001871!6.75e-18!7;UBERON:0001017!2.30e-17!82;UBERON:0000955!1.62e-16!69;UBERON:0006238!1.62e-16!69;UBERON:0005743!2.12e-16!86;UBERON:0001049!7.61e-16!57;UBERON:0005068!7.61e-16!57;UBERON:0006241!7.61e-16!57;UBERON:0007135!7.61e-16!57;UBERON:0000160!1.47e-15!27;UBERON:0002616!3.20e-15!59;UBERON:0000200!8.13e-15!6;UBERON:0003056!1.23e-14!61;UBERON:0000073!1.60e-14!94;UBERON:0001016!1.60e-14!94;UBERON:0005409!2.07e-14!35;UBERON:0000059!2.69e-13!11;UBERON:0003075!7.47e-13!86;UBERON:0007284!7.47e-13!86;UBERON:0002346!3.84e-12!90;UBERON:0002360!9.06e-12!2;UBERON:0000094!9.06e-12!2;UBERON:0007645!9.06e-12!2;UBERON:0001155!9.41e-11!9;UBERON:0001872!1.96e-10!5;UBERON:0002771!1.54e-08!3;UBERON:0000033!5.88e-08!123;UBERON:0000153!1.90e-07!129;UBERON:0007811!1.90e-07!129;UBERON:0001154!3.17e-07!1;UBERON:0001153!3.17e-07!1;UBERON:0002022!5.06e-07!1;UBERON:0001301!8.02e-07!1;UBERON:0000064!8.65e-07!219;UBERON:0002902!8.98e-07!1;UBERON:0009899!8.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;6.20e-67;17!UBERON:0005409;1.81e-52;22!UBERON:0002108;2.20e-45;4!UBERON:0001155;5.54e-44;9!UBERON:0000059;4.06e-36;11!UBERON:0004921;4.86e-32;33!UBERON:0001154;1.26e-25;1!UBERON:0001153;1.26e-25;1!UBERON:0009854;1.26e-25;1!UBERON:0001555;3.14e-13;54!UBERON:0002114;1.30e-09;2!UBERON:0001007;9.31e-09;81!UBERON:0009856;2.04e-07;4!UBERON:0000922;6.93e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.20e-67,17;UBERON:0005409,1.87e-46,25;UBERON:0002108,2.20e-45,4;UBERON:0001155,5.54e-44,9;UBERON:0000059,4.06e-36,11;UBERON:0001154,1.26e-25,1;UBERON:0001153,1.26e-25,1;UBERON:0001045,1.26e-25,1;UBERON:0004921,3.10e-10,118;UBERON:0002114,1.30e-09,2;UBERON:0001007,2.49e-08,145;UBERON:0001555,2.49e-08,145;UBERON:0007026,2.49e-08,145;UBERON:0004119,1.52e-07,160;UBERON:0000925,1.52e-07,160;UBERON:0006595,1.52e-07,160;UBERON:0011216,6.23e-07,223 | |||
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|short_description=p1@KIAA1211 | |short_description=p1@KIAA1211 | ||
}} | }} |
Latest revision as of 02:24, 18 September 2015
Short description: | p1@KIAA1211 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIAA1211_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -7bp_to_uc010iha.2_5end |
EntrezGene: | KIAA1211 |
HGNC: | 29219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 6.20e-67 | 17 |
gastrointestinal system | 1.87e-46 | 25 |
small intestine | 2.20e-45 | 4 |
colon | 5.54e-44 | 9 |
large intestine | 4.06e-36 | 11 |
vermiform appendix | 1.26e-25 | 1 |
caecum | 1.26e-25 | 1 |
midgut | 1.26e-25 | 1 |
subdivision of digestive tract | 3.10e-10 | 118 |
duodenum | 1.30e-09 | 2 |
digestive system | 2.49e-08 | 145 |
digestive tract | 2.49e-08 | 145 |
primitive gut | 2.49e-08 | 145 |
endoderm-derived structure | 1.52e-07 | 160 |
endoderm | 1.52e-07 | 160 |
presumptive endoderm | 1.52e-07 | 160 |
organ system subdivision | 6.23e-07 | 223 |