FFCP PHASE1:Hg19::chr1:43736292..43736303,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=128218 | |EntrezGene=128218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28275 | |HGNC=28275 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=35bp_to_uc001cis.2_5end | |association_with_transcript=35bp_to_uc001cis.2_5end | ||
|cluster_id=chr1:43736292..43736303,+ | |||
|description=CAGE_peak_3_at_TMEM125_5end | |description=CAGE_peak_3_at_TMEM125_5end | ||
|id=chr1:43736292..43736303,+ | |id=chr1:43736292..43736303,+ | ||
|ontology_enrichment_celltype=CL:0000039!5.17e-10!7;CL:0000586!5.17e-10!7;CL:0000066!1.73e-09!254;CL:0002322!6.65e-07!5 | |ontology_enrichment_celltype=CL:0000039!5.17e-10!7;CL:0000586!5.17e-10!7;CL:0000066!1.73e-09!254;CL:0002322!6.65e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0002149;1.17e-09;6!CL:0002255;1.17e-09;6!CL:0000039;1.73e-08;7!CL:0000586;1.73e-08;7!CL:0000167;7.99e-08;1!CL:0000164;7.99e-08;1!CL:0000502;7.99e-08;1!CL:0000172;7.99e-08;1!CL:0000173;7.99e-08;1!CL:0002032;2.82e-07;1!CL:0000557;2.82e-07;1 | |ontology_enrichment_celltype_v019=CL:0002149;1.17e-09;6!CL:0002255;1.17e-09;6!CL:0000039;1.73e-08;7!CL:0000586;1.73e-08;7!CL:0000167;7.99e-08;1!CL:0000164;7.99e-08;1!CL:0000502;7.99e-08;1!CL:0000172;7.99e-08;1!CL:0000173;7.99e-08;1!CL:0002032;2.82e-07;1!CL:0000557;2.82e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002149,1.25e-09,6;CL:0002255,1.25e-09,6;CL:0000039,2.13e-08,7;CL:0000586,2.13e-08,7;CL:0000167,8.54e-08,1;CL:0000164,8.54e-08,1;CL:0000502,8.54e-08,1;CL:0000172,8.54e-08,1;CL:0000173,8.54e-08,1;CL:0002351,8.54e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;7.99e-08;1!UBERON:0005754;1.25e-07;1!UBERON:0006298;2.82e-07;1 | |ontology_enrichment_development_v019=CL:0002351;7.99e-08;1!UBERON:0005754;1.25e-07;1!UBERON:0006298;2.82e-07;1 | ||
|ontology_enrichment_disease=DOID:305!8.56e-18!106;DOID:0050687!2.50e-13!143;DOID:1749!6.20e-09!14;DOID:299!4.29e-07!25 | |ontology_enrichment_disease=DOID:305!8.56e-18!106;DOID:0050687!2.50e-13!143;DOID:1749!6.20e-09!14;DOID:299!4.29e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3001;1.17e-09;6!DOID:4430;7.99e-08;1!DOID:0050619;9.39e-08;1!DOID:1357;9.39e-08;1 | |ontology_enrichment_disease_v019=DOID:3001;1.17e-09;6!DOID:4430;7.99e-08;1!DOID:0050619;9.39e-08;1!DOID:1357;9.39e-08;1 | ||
|ontology_enrichment_disease_v019_2=DOID:3001,1.25e-09,6;DOID:4430,8.54e-08,1;DOID:0050619,9.10e-08,1;DOID:1357,9.10e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.57e-12!169;UBERON:0000925!4.57e-12!169;UBERON:0006595!4.57e-12!169;UBERON:0001007!7.89e-12!155;UBERON:0001555!7.89e-12!155;UBERON:0007026!7.89e-12!155;UBERON:0000464!1.75e-11!104;UBERON:0004921!2.74e-10!129;UBERON:0004185!2.74e-10!129;UBERON:0000466!3.37e-10!126;UBERON:0005156!3.59e-09!59;UBERON:0000990!3.59e-09!59;UBERON:0000077!2.41e-08!130;UBERON:0007023!4.58e-08!115;UBERON:0002553!5.38e-08!70;UBERON:0003133!6.87e-08!48;UBERON:0005911!9.81e-08!82;UBERON:0005153!4.87e-07!37 | |ontology_enrichment_uberon=UBERON:0004119!4.57e-12!169;UBERON:0000925!4.57e-12!169;UBERON:0006595!4.57e-12!169;UBERON:0001007!7.89e-12!155;UBERON:0001555!7.89e-12!155;UBERON:0007026!7.89e-12!155;UBERON:0000464!1.75e-11!104;UBERON:0004921!2.74e-10!129;UBERON:0004185!2.74e-10!129;UBERON:0000466!3.37e-10!126;UBERON:0005156!3.59e-09!59;UBERON:0000990!3.59e-09!59;UBERON:0000077!2.41e-08!130;UBERON:0007023!4.58e-08!115;UBERON:0002553!5.38e-08!70;UBERON:0003133!6.87e-08!48;UBERON:0005911!9.81e-08!82;UBERON:0005153!4.87e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0000007;2.06e-13;2!UBERON:0006947;4.14e-09;3!UBERON:0004054;4.14e-09;3!UBERON:0003135;4.45e-09;11!UBERON:0001764;9.39e-08;1!UBERON:0001825;9.39e-08;1!UBERON:0000998;1.25e-07;1!UBERON:0006868;1.25e-07;1!UBERON:0000473;1.76e-07;8!UBERON:0001000;2.82e-07;1!UBERON:0001736;2.82e-07;1!UBERON:0005352;2.82e-07;1!UBERON:0003296;3.97e-07;4!UBERON:0010133;3.97e-07;4!UBERON:0004175;4.76e-07;21!UBERON:0001052;4.91e-07;4!UBERON:0005904;4.91e-07;4 | |ontology_enrichment_uberon_v019=UBERON:0000007;2.06e-13;2!UBERON:0006947;4.14e-09;3!UBERON:0004054;4.14e-09;3!UBERON:0003135;4.45e-09;11!UBERON:0001764;9.39e-08;1!UBERON:0001825;9.39e-08;1!UBERON:0000998;1.25e-07;1!UBERON:0006868;1.25e-07;1!UBERON:0000473;1.76e-07;8!UBERON:0001000;2.82e-07;1!UBERON:0001736;2.82e-07;1!UBERON:0005352;2.82e-07;1!UBERON:0003296;3.97e-07;4!UBERON:0010133;3.97e-07;4!UBERON:0004175;4.76e-07;21!UBERON:0001052;4.91e-07;4!UBERON:0005904;4.91e-07;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,2.99e-13,2;UBERON:0006947,4.68e-09,3;UBERON:0004054,4.68e-09,3;UBERON:0003135,5.87e-09,11;UBERON:0001764,9.10e-08,1;UBERON:0001825,9.10e-08,1;UBERON:0000998,1.03e-07,1;UBERON:0006868,1.03e-07,1;UBERON:0000473,2.06e-07,8;UBERON:0001736,2.50e-07,1;UBERON:0006298,2.50e-07,1;UBERON:0001000,4.09e-07,1;UBERON:0005352,4.09e-07,1;UBERON:0001052,4.49e-07,4;UBERON:0003296,4.77e-07,4;UBERON:0010133,4.77e-07,4;UBERON:0005904,5.38e-07,4 | |||
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| ||
|short_description=p3@TMEM125 | |short_description=p3@TMEM125 | ||
}} | }} |
Latest revision as of 04:14, 18 September 2015
Short description: | p3@TMEM125 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM125_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_uc001cis.2_5end |
EntrezGene: | TMEM125 |
HGNC: | 28275 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 1.25e-09 | 6 |
stromal cell of endometrium | 1.25e-09 | 6 |
germ line cell | 2.13e-08 | 7 |
germ cell | 2.13e-08 | 7 |
peptide hormone secreting cell | 8.54e-08 | 1 |
enteroendocrine cell | 8.54e-08 | 1 |
type D enteroendocrine cell | 8.54e-08 | 1 |
somatostatin secreting cell | 8.54e-08 | 1 |
pancreatic D cell | 8.54e-08 | 1 |
progenitor cell of endocrine pancreas | 8.54e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 2.99e-13 | 2 |
male genital duct | 4.68e-09 | 3 |
internal male genitalia | 4.68e-09 | 3 |
male reproductive organ | 5.87e-09 | 11 |
maxillary sinus | 9.10e-08 | 1 |
paranasal sinus | 9.10e-08 | 1 |
seminal vesicle | 1.03e-07 | 1 |
seminal fluid secreting gland | 1.03e-07 | 1 |
testis | 2.06e-07 | 8 |
submandibular gland | 2.50e-07 | 1 |
submandibular gland primordium | 2.50e-07 | 1 |
vas deferens | 4.09e-07 | 1 |
spermatic cord | 4.09e-07 | 1 |
rectum | 4.49e-07 | 4 |
gland of diencephalon | 4.77e-07 | 4 |
neuroendocrine gland | 4.77e-07 | 4 |
duct of male reproductive system | 5.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 1.25e-09 | 6 |
somatostatinoma | 8.54e-08 | 1 |
paranasal sinus cancer | 9.10e-08 | 1 |
maxillary sinus cancer | 9.10e-08 | 1 |