FFCP PHASE1:Hg19::chr1:43766619..43766635,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:43766619..43766635,+
|short_description=p3@TIE1
|description=CAGE_peak_3_at_TIE1_5end
|association_with_transcript=-28bp_to_ENST00000372476,uc001ciu.2,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7075 | |EntrezGene=7075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11809 | |HGNC=11809 | ||
|TSSclassifier=strong | |||
|UniProt=P35590 | |UniProt=P35590 | ||
|association_with_transcript=-28bp_to_ENST00000372476,uc001ciu.2,uc009vwq.2,uc010oka.1,uc010okb.1,uc010okc.1,uc010okd.1,uc010oke.1_5end | |||
|cluster_id=chr1:43766619..43766635,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_3_at_TIE1_5end | |||
|id=chr1:43766619..43766635,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.42e-21!24;CL:0000115!6.94e-19!35;CL:0000071!1.44e-16!18;CL:0002546!1.44e-16!18;CL:0000213!1.74e-13!57;CL:0000215!1.74e-13!57;CL:0002078!3.62e-12!44;CL:1000413!4.47e-09!9;CL:0000222!9.63e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.00e-35;24!CL:0000115;2.23e-29;36!CL:0000071;1.02e-26;18!CL:0002078;1.88e-16;45!CL:1000413;3.63e-14;9!CL:0000213;1.87e-13;58!CL:0000215;1.87e-13;58!CL:0002544;4.16e-10;6!CL:0002138;6.33e-10;6!CL:0002543;7.62e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.13e-35,24;CL:0000115,1.09e-34,36;CL:0000071,1.09e-26,18;CL:0002546,1.09e-26,18;CL:0002078,1.92e-25,45;CL:0000213,4.58e-21,58;CL:0000215,4.58e-21,58;CL:1000413,3.91e-14,9;CL:0002544,4.43e-10,6;CL:0005020,6.16e-10,6;CL:0002138,6.16e-10,6;CL:0005022,6.16e-10,6;CL:0002543,7.58e-10,6;CL:0000222,1.57e-08,121 | |||
|ontology_enrichment_development_v019=CL:0002546;1.02e-26;18!CL:0005022;6.33e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.70e-20!115;UBERON:0001986!1.44e-16!18;UBERON:0004638!1.44e-16!18;UBERON:0004852!1.44e-16!18;UBERON:0000025!3.52e-15!194;UBERON:0000055!1.24e-14!69;UBERON:0004872!6.62e-14!84;UBERON:0004111!9.52e-14!241;UBERON:0002049!1.02e-13!79;UBERON:0007798!1.02e-13!79;UBERON:0000477!3.45e-13!286;UBERON:0000487!6.35e-13!22;UBERON:0001009!1.86e-12!113;UBERON:0001981!1.45e-11!60;UBERON:0007500!1.45e-11!60;UBERON:0004537!1.45e-11!60;UBERON:0006965!1.45e-11!60;UBERON:0003914!1.53e-11!118;UBERON:0004535!2.28e-11!110;UBERON:0006914!2.54e-10!25;UBERON:0003915!4.47e-09!9;UBERON:0004700!4.47e-09!9;UBERON:0001917!4.47e-09!9;UBERON:0000119!4.72e-08!312;UBERON:0000483!1.67e-07!309;UBERON:0003103!9.30e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.02e-26;18!UBERON:0001986;1.02e-26;18!UBERON:0004852;1.02e-26;18!UBERON:0000487;1.21e-20;22!UBERON:0006914;2.19e-17;25!UBERON:0003915;3.63e-14;9!UBERON:0004700;3.63e-14;9!UBERON:0001917;3.63e-14;9!UBERON:0000490;6.00e-12;33!UBERON:0000055;2.03e-09;65!UBERON:0001638;5.26e-08;9!UBERON:0003920;5.26e-08;9!UBERON:0004582;5.26e-08;9!UBERON:0007500;3.40e-07;56!UBERON:0001981;3.40e-07;56!UBERON:0004537;3.40e-07;56!UBERON:0001473;4.01e-07;8!UBERON:0004536;4.01e-07;8!UBERON:0006558;4.01e-07;8!UBERON:0002465;4.25e-07;10!UBERON:0007100;9.67e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.09e-26,18;UBERON:0001986,1.09e-26,18;UBERON:0004852,1.09e-26,18;UBERON:0000487,1.27e-20,22;UBERON:0000055,9.66e-18,68;UBERON:0006914,2.27e-17,25;UBERON:0002049,6.33e-15,78;UBERON:0007798,6.33e-15,78;UBERON:0004872,1.17e-14,83;UBERON:0003915,3.91e-14,9;UBERON:0004700,3.91e-14,9;UBERON:0001917,3.91e-14,9;UBERON:0001009,1.76e-13,112;UBERON:0007500,1.91e-13,59;UBERON:0001981,1.91e-13,59;UBERON:0004537,1.91e-13,59;UBERON:0006965,1.91e-13,59;UBERON:0004535,6.01e-12,109;UBERON:0003914,9.49e-11,117;UBERON:0001638,6.32e-08,9;UBERON:0003920,6.32e-08,9;UBERON:0004582,6.32e-08,9;UBERON:0002465,3.54e-07,10;UBERON:0001473,3.93e-07,8;UBERON:0004536,3.93e-07,8;UBERON:0006558,3.93e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0.331397375727916,0.672325146451775,0,2.19093027116212,1.46379839637152,0.492484232307152,0,0.313454721478088,0,0.136874425072884,0,0.152826811495903,0.410502947249729,0.472264687882075,0,0,0.154816123316076,0,0,0,0.0774672005803016,0,4.9912074686924,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,3.423993102076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,0,0,0,0,0,0.189069634328136,0.443458794925128,0.790513071238134,1.76821751921912,0,0,0.324547393654683,0.696518949197069,0.398873881556595,0,0,0,16.6960422188032,16.3444573070164,18.0513060835949,25.4388573865804,12.1654836500873,18.4329088099845,13.3756778583559,18.3475899010223,13.8748842447817,14.3929863488808,26.9895642463128,13.6848979029332,30.263695135973,13.2358708924513,19.4434067491622,13.394959242612,14.594409220701,10.9233136068823,13.7984973719295,16.1375162126582,26.7474546138395,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,6.4049397437823,0.24666754841716,0,2.69421344139376,3.26923806226917,0,0.576175924479999,0,0,2.2818872861778,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0.907457465280168,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0.932949495138334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.860394549731,19.6338483324824,0.4115740113314,0,0,0,2.36315962672562,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0.117408694235822,17.612706626851,15.7415074276048,15.0300780265333,0,0,0,0.234004265139238,0.594524649154913,0,0,0,0,0,0,0.985326475791887,3.52193736052904,0.414656231081544,2.01767934783746,1.38866676769018,0,0,0,0,0,0,0,0.784917590417525,0.43596006883328,1.3200891447771,0,3.57656445851882,0,0,0,0,0,0.266422179016099,0.142977993658148,0,0,1.62868092146868,0,0,0,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.215627574859517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,28.4333460177242,21.431806864841,9.50030030849413,29.303178011155,0.812839312631559,0.501689773854853,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0.435050081742686,0.255679882248303,0.178064071293475,0,0,0,0,0,0,0,0.308033580176089,0.532306030317022,0,0.74129687641568,0,1.48863347743867,0,0,0,0,0,0.78494864019923,0,0,0.235624804691373,1.2130948894399,0,2.10629228119491,0,0.243713489631284,0,0,0,0,0,0,0,0,0.655894752046633,0.202910376962704,0.92947049429925,0.845086807596724,0,0,0,7.44998234548255,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0.144269212976445,0,0,4.19116680008915,0.957526850661834,7.4085753953359,0,0.561594356226918,0,0,10.0253790836027,9.64963133469139,0,0,0,0,0,0,0,0,0,0,0,3.66379164797602,5.63948020351398,0,5.56731081233197,0.242721043499027,2.78608460693696,0,0,0,0,0,0.562677665642051,6.56721359635145,0,0,2.39097585901284,1.38141957765574,0,0.102268682502155,2.09244169283818,0,0,0,0,0.887790650732402,0,0,1.93866549219044,0.463840490809256,1.99613798001194,0,0,10.1499940560871,0,0,0,0,0,0,0,0.361789315876224,0,0.221158519862449,1.18219047581419,1.09692698576986,0,0,2.00070672109872,0,0,0.0897576444097721,0,1.5950057986596,0,1.06606955203727,0,2.66866435871542,6.81467895790641,0,0,0,0,1.43042921082341,0,0,0,0,0.995261931078505,1.14994833854341,4.888241159469,0,0,0,0.606610196826093,7.2231988256891,0.702793337176017,0,0,0,1.18375320854817,2.41981432097328,0,1.45329133145522,0,0,0,0.992975867626496,0.627865836814451,0,0,0.138674673013139,0,0,0,1.22308667769421,0,0,0,0,2.03676934625681,0,2.48578814858586,3.70013196546227,21.4611780639229,0.189932387867636,0,0.240476460754601,0.640358984218058,0,0,0,0.343189995723929,0,17.519607514726,0,0,0.313808538937,0.101998217636322,0.288950589901519,0,0.410716136675979,2.55493176133945,0,25.7629607193728,4.74780082162832,1.83328339209347,4.30723814746088,1.19807400299395,2.57535628881943,1.33902874465124,2.68733889946905,0,0,0,0.164831716762333,0.0674035438541849,0,1.1007533168552,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0.546746009922222,0,0.630445658393585,2.7800931711549,0.950403028674658,0,0,0.714695326373367,4.63464379255802,0,0,0.864221491201268,0.326587360109409,2.39460383124975,4.59718116196298,0.170388021785422,2.94611437952327,1.75862680413699,2.65013777824443,0.258565912723101,0.52893040697076,0,0,2.56289790162467,8.80344108558129,5.38510771951354,2.97699613087171,0,0.121792598380896,0,1.08803560673895,1.0027595760908,1.22538230705385,0.983617892129413,0,0,0.732157589411779,0.500763722825999,0,0.221858103073705,0.683060432355218,0,0,0,0,15.5275441000793,0,0,0,0.233713309847224,1.10961172300523,0,0,0,0.228840068396924,0.151230923763239,0,0.443565449968902,1.91156120596443,3.14862178514523,1.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| ||
|short_description=p3@TIE1 | |||
}} | }} |
Latest revision as of 04:18, 18 September 2015
Short description: | p3@TIE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TIE1_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | -28bp_to_ENST00000372476, uc001ciu.2, uc009vwq.2, uc010oka.1, uc010okb.1, uc010okc.1, uc010okd.1, uc010oke.1_5end |
EntrezGene: | TIE1 |
HGNC: | 11809 |
UniProt: | P35590 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.13e-35 | 24 |
endothelial cell | 1.09e-34 | 36 |
blood vessel endothelial cell | 1.09e-26 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.09e-26 | 18 |
meso-epithelial cell | 1.92e-25 | 45 |
lining cell | 4.58e-21 | 58 |
barrier cell | 4.58e-21 | 58 |
endothelial cell of artery | 3.91e-14 | 9 |
aortic endothelial cell | 4.43e-10 | 6 |
lymphangioblast | 6.16e-10 | 6 |
endothelial cell of lymphatic vessel | 6.16e-10 | 6 |
vascular lymphangioblast | 6.16e-10 | 6 |
vein endothelial cell | 7.58e-10 | 6 |
mesodermal cell | 1.57e-08 | 121 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.09e-26 | 18 |
endothelium | 1.09e-26 | 18 |
cardiovascular system endothelium | 1.09e-26 | 18 |
simple squamous epithelium | 1.27e-20 | 22 |
vessel | 9.66e-18 | 68 |
squamous epithelium | 2.27e-17 | 25 |
vasculature | 6.33e-15 | 78 |
vascular system | 6.33e-15 | 78 |
splanchnic layer of lateral plate mesoderm | 1.17e-14 | 83 |
endothelial tube | 3.91e-14 | 9 |
arterial system endothelium | 3.91e-14 | 9 |
endothelium of artery | 3.91e-14 | 9 |
circulatory system | 1.76e-13 | 112 |
epithelial tube open at both ends | 1.91e-13 | 59 |
blood vessel | 1.91e-13 | 59 |
blood vasculature | 1.91e-13 | 59 |
vascular cord | 1.91e-13 | 59 |
cardiovascular system | 6.01e-12 | 109 |
epithelial tube | 9.49e-11 | 117 |
vein | 6.32e-08 | 9 |
venous blood vessel | 6.32e-08 | 9 |
venous system | 6.32e-08 | 9 |
lymphoid system | 3.54e-07 | 10 |
lymphatic vessel | 3.93e-07 | 8 |
lymph vasculature | 3.93e-07 | 8 |
lymphatic part of lymphoid system | 3.93e-07 | 8 |