FFCP PHASE1:Hg19::chr5:55243417..55243421,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3572 | |EntrezGene=3572 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6021 | |HGNC=6021 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000523039_5end | |association_with_transcript=0bp_to_ENST00000523039_5end | ||
|cluster_id=chr5:55243417..55243421,- | |||
|description=CAGE_peak_4_at_IL6ST_5end | |description=CAGE_peak_4_at_IL6ST_5end | ||
|id=chr5:55243417..55243421,- | |id=chr5:55243417..55243421,- | ||
|ontology_enrichment_celltype=CL:0002031!1.46e-13!124;CL:0000738!2.47e-13!140;CL:0002087!1.58e-12!119;CL:0002057!1.91e-09!42;CL:0000860!4.54e-08!45;CL:0000037!7.17e-08!172;CL:0000566!7.17e-08!172;CL:0002032!1.55e-07!165;CL:0000837!1.55e-07!165;CL:0000557!2.73e-07!71;CL:0000839!3.41e-07!70 | |ontology_enrichment_celltype=CL:0002031!1.46e-13!124;CL:0000738!2.47e-13!140;CL:0002087!1.58e-12!119;CL:0002057!1.91e-09!42;CL:0000860!4.54e-08!45;CL:0000037!7.17e-08!172;CL:0000566!7.17e-08!172;CL:0002032!1.55e-07!165;CL:0000837!1.55e-07!165;CL:0000557!2.73e-07!71;CL:0000839!3.41e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.95e-09;33!CL:0002057;2.95e-09;33!CL:0000791;3.99e-08;18!CL:0000789;3.99e-08;18!CL:0002419;3.99e-08;18 | |ontology_enrichment_celltype_v019=CL:0000860;2.95e-09;33!CL:0002057;2.95e-09;33!CL:0000791;3.99e-08;18!CL:0000789;3.99e-08;18!CL:0002419;3.99e-08;18 | ||
|ontology_enrichment_celltype_v019_2=CL:0002031,5.63e-15,120;CL:0000738,6.75e-15,136;CL:0002087,9.20e-14,115;CL:0000860,2.28e-09,42;CL:0002057,2.28e-09,42;CL:0000037,3.74e-09,168;CL:0000557,4.78e-09,67;CL:0002032,7.96e-09,161;CL:0000837,7.96e-09,161;CL:0000791,1.48e-08,18;CL:0000789,1.48e-08,18;CL:0002420,1.48e-08,18;CL:0002419,1.48e-08,18;CL:0000790,1.48e-08,18;CL:0000839,1.93e-08,66;CL:0000988,2.92e-08,177;CL:0002009,8.93e-08,61;CL:0000766,2.46e-07,72;CL:0000473,2.81e-07,48;CL:0000234,2.81e-07,48;CL:0002194,5.32e-07,59;CL:0000576,5.32e-07,59;CL:0000040,5.32e-07,59;CL:0000559,5.32e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000790;3.99e-08;18!CL:0002057;3.30e-07;42 | |ontology_enrichment_development_v019=CL:0000790;3.99e-08;18!CL:0002057;3.30e-07;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.67e-13!115;UBERON:0002193!3.10e-12!112;UBERON:0002390!4.03e-11!102;UBERON:0003061!4.03e-11!102;UBERON:0002405!1.02e-08!115;UBERON:0002371!7.36e-07!80 | |ontology_enrichment_uberon=UBERON:0007023!5.67e-13!115;UBERON:0002193!3.10e-12!112;UBERON:0002390!4.03e-11!102;UBERON:0003061!4.03e-11!102;UBERON:0002405!1.02e-08!115;UBERON:0002371!7.36e-07!80 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.67e-15,108;UBERON:0002390,2.26e-13,98;UBERON:0003061,2.26e-13,98;UBERON:0002405,1.39e-11,93;UBERON:0007023,8.35e-09,114;UBERON:0002371,1.50e-08,76;UBERON:0001474,1.88e-07,82 | |||
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| ||
|short_description=p4@IL6ST | |short_description=p4@IL6ST | ||
}} | }} |
Latest revision as of 04:39, 18 September 2015
Short description: | p4@IL6ST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL6ST_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000523039_5end |
EntrezGene: | IL6ST |
HGNC: | 6021 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic lineage restricted progenitor cell | 5.63e-15 | 120 |
leukocyte | 6.75e-15 | 136 |
nongranular leukocyte | 9.20e-14 | 115 |
classical monocyte | 2.28e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.28e-09 | 42 |
hematopoietic stem cell | 3.74e-09 | 168 |
granulocyte monocyte progenitor cell | 4.78e-09 | 67 |
hematopoietic oligopotent progenitor cell | 7.96e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.96e-09 | 161 |
mature alpha-beta T cell | 1.48e-08 | 18 |
alpha-beta T cell | 1.48e-08 | 18 |
immature T cell | 1.48e-08 | 18 |
mature T cell | 1.48e-08 | 18 |
immature alpha-beta T cell | 1.48e-08 | 18 |
myeloid lineage restricted progenitor cell | 1.93e-08 | 66 |
hematopoietic cell | 2.92e-08 | 177 |
macrophage dendritic cell progenitor | 8.93e-08 | 61 |
myeloid leukocyte | 2.46e-07 | 72 |
defensive cell | 2.81e-07 | 48 |
phagocyte | 2.81e-07 | 48 |
monopoietic cell | 5.32e-07 | 59 |
monocyte | 5.32e-07 | 59 |
monoblast | 5.32e-07 | 59 |
promonocyte | 5.32e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.67e-15 | 108 |
hematopoietic system | 2.26e-13 | 98 |
blood island | 2.26e-13 | 98 |
immune system | 1.39e-11 | 93 |
adult organism | 8.35e-09 | 114 |
bone marrow | 1.50e-08 | 76 |
bone element | 1.88e-07 | 82 |