FFCP PHASE1:Hg19::chr19:41858934..41858979,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7040 | |EntrezGene=7040 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11766 | |HGNC=11766 | ||
|TSSclassifier=strong | |||
|UniProt=P01137 | |UniProt=P01137 | ||
|association_with_transcript=0bp_to_BT007245,CU692504,EU832132,EU832225_5end | |association_with_transcript=0bp_to_BT007245,CU692504,EU832132,EU832225_5end | ||
|cluster_id=chr19:41858934..41858979,- | |||
|description=CAGE_peak_9_at_TGFB1_5end | |description=CAGE_peak_9_at_TGFB1_5end | ||
|id=chr19:41858934..41858979,- | |id=chr19:41858934..41858979,- | ||
|ontology_enrichment_celltype=CL:0000144!2.74e-24!625;CL:0002371!1.10e-22!591;CL:0000012!1.31e-20!682;CL:0000548!6.19e-20!679;CL:0000004!6.19e-20!679;CL:0000255!6.19e-20!679;CL:0000988!5.97e-18!182;CL:0000034!1.22e-17!444;CL:0000003!6.00e-17!722;CL:0000048!2.15e-16!430;CL:0000723!4.12e-16!436;CL:0000037!3.30e-15!172;CL:0000566!3.30e-15!172;CL:0002032!1.70e-14!165;CL:0000837!1.70e-14!165;CL:0000134!2.68e-12!358;CL:0000219!4.56e-12!390;CL:0002320!4.97e-12!365;CL:0000063!8.93e-11!578;CL:0002087!1.62e-10!119;CL:0000738!2.79e-10!140;CL:0000542!3.02e-09!53;CL:0000051!3.02e-09!53;CL:0002031!3.84e-09!124;CL:0000838!7.80e-09!52 | |ontology_enrichment_celltype=CL:0000144!2.74e-24!625;CL:0002371!1.10e-22!591;CL:0000012!1.31e-20!682;CL:0000548!6.19e-20!679;CL:0000004!6.19e-20!679;CL:0000255!6.19e-20!679;CL:0000988!5.97e-18!182;CL:0000034!1.22e-17!444;CL:0000003!6.00e-17!722;CL:0000048!2.15e-16!430;CL:0000723!4.12e-16!436;CL:0000037!3.30e-15!172;CL:0000566!3.30e-15!172;CL:0002032!1.70e-14!165;CL:0000837!1.70e-14!165;CL:0000134!2.68e-12!358;CL:0000219!4.56e-12!390;CL:0002320!4.97e-12!365;CL:0000063!8.93e-11!578;CL:0002087!1.62e-10!119;CL:0000738!2.79e-10!140;CL:0000542!3.02e-09!53;CL:0000051!3.02e-09!53;CL:0002031!3.84e-09!124;CL:0000838!7.80e-09!52 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.79e-19,177;CL:0000034,8.03e-17,441;CL:0000037,1.03e-15,168;CL:0002032,1.57e-15,161;CL:0000837,1.57e-15,161;CL:0000048,3.46e-15,427;CL:0000723,4.82e-15,433;CL:0000134,1.91e-11,354;CL:0000542,2.26e-11,53;CL:0000051,2.26e-11,53;CL:0000219,2.44e-11,386;CL:0002320,5.26e-11,361;CL:0000838,7.15e-11,52;CL:0002087,2.84e-10,115;CL:0000738,3.06e-10,136;CL:0002031,6.14e-09,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!1.80e-13!51;DOID:0060083!1.80e-13!51;DOID:1240!3.44e-09!39;DOID:8692!4.26e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.14e-08;39!DOID:2531;2.45e-08;51!DOID:0060083;2.45e-08;51!DOID:8692;4.42e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.57e-14,51;DOID:0060083,5.57e-14,51;DOID:1240,6.65e-10,39;DOID:8692,1.87e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!4.14e-11!375;UBERON:0003081!8.02e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,3.30e-10,371;UBERON:0004535,2.80e-07,109;UBERON:0002049,8.39e-07,78;UBERON:0007798,8.39e-07,78 | |||
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| ||
|short_description=p9@TGFB1 | |short_description=p9@TGFB1 | ||
}} | }} |
Latest revision as of 05:15, 18 September 2015
Short description: | p9@TGFB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TGFB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_BT007245, CU692504, EU832132, EU832225_5end |
EntrezGene: | TGFB1 |
HGNC: | 11766 |
UniProt: | P01137 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.79e-19 | 177 |
stem cell | 8.03e-17 | 441 |
hematopoietic stem cell | 1.03e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.57e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.57e-15 | 161 |
multi fate stem cell | 3.46e-15 | 427 |
somatic stem cell | 4.82e-15 | 433 |
mesenchymal cell | 1.91e-11 | 354 |
lymphocyte | 2.26e-11 | 53 |
common lymphoid progenitor | 2.26e-11 | 53 |
motile cell | 2.44e-11 | 386 |
connective tissue cell | 5.26e-11 | 361 |
lymphoid lineage restricted progenitor cell | 7.15e-11 | 52 |
nongranular leukocyte | 2.84e-10 | 115 |
leukocyte | 3.06e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 6.14e-09 | 120 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 3.30e-10 | 371 |
cardiovascular system | 2.80e-07 | 109 |
vasculature | 8.39e-07 | 78 |
vascular system | 8.39e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.57e-14 | 51 |
immune system cancer | 5.57e-14 | 51 |
leukemia | 6.65e-10 | 39 |
myeloid leukemia | 1.87e-07 | 31 |