FFCP PHASE1:Hg19::chr9:94711007..94711026,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4920 | |EntrezGene=4920 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10257 | |HGNC=10257 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000546883_5end | |||
|cluster_id=chr9:94711007..94711026,- | |||
|coexpression_cluster_id=C114 | |||
|description=CAGE_peak_6_at_ROR2_5end | |||
|id=chr9:94711007..94711026,- | |||
|ontology_enrichment_celltype=CL:0000188!4.23e-07!9;CL:0002504!4.42e-07!3;CL:1000279!4.42e-07!3;CL:1000280!4.42e-07!3;CL:0000393!5.69e-07!60;CL:0000211!5.69e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002549;3.34e-11;2!CL:0000746;5.01e-08;3!CL:0000214;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,3.35e-11,2;CL:0000746,4.84e-08,3;CL:0000513,4.84e-08,3;CL:0000214,5.93e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006242;5.16e-21;1!CL:0000513;5.01e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060060;5.16e-21;1!DOID:0060061;5.16e-21;1!DOID:8691;5.16e-21;1!DOID:0060058;7.36e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,6.31e-21,1;DOID:0060061,6.31e-21,1;DOID:8691,6.31e-21,1;DOID:0060058,6.80e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.66e-10!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005629;3.34e-11;2!UBERON:0005358;3.34e-11;2!UBERON:0001886;3.34e-11;2!UBERON:0004086;3.34e-11;2!UBERON:0005282;3.34e-11;2!UBERON:0005281;3.34e-11;2!UBERON:0002110;6.78e-08;3!UBERON:0006915;6.78e-08;3!UBERON:0007616;6.78e-08;3!UBERON:0002217;6.78e-08;3!UBERON:0002018;6.78e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,3.35e-11,2;UBERON:0005358,3.35e-11,2;UBERON:0001886,3.35e-11,2;UBERON:0004086,3.35e-11,2;UBERON:0005282,3.35e-11,2;UBERON:0005281,3.35e-11,2;UBERON:0006915,5.93e-08,3;UBERON:0007616,5.93e-08,3;UBERON:0002217,5.93e-08,3;UBERON:0002018,5.93e-08,3;UBERON:0002110,6.34e-08,3;UBERON:0006242,6.34e-08,3 | |||
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| ||
|short_description=p6@ROR2 | |||
}} | }} |
Latest revision as of 06:45, 18 September 2015
Short description: | p6@ROR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ROR2_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | 0bp_to_ENST00000546883_5end |
EntrezGene: | ROR2 |
HGNC: | 10257 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 3.35e-11 | 2 |
cardiac muscle cell | 4.84e-08 | 3 |
cardiac muscle myoblast | 4.84e-08 | 3 |
synovial cell | 5.93e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 3.35e-11 | 2 |
ventricle of nervous system | 3.35e-11 | 2 |
choroid plexus | 3.35e-11 | 2 |
brain ventricle | 3.35e-11 | 2 |
ventricular system of brain | 3.35e-11 | 2 |
ventricular system of central nervous system | 3.35e-11 | 2 |
stratified squamous epithelium | 5.93e-08 | 3 |
layer of synovial tissue | 5.93e-08 | 3 |
synovial joint | 5.93e-08 | 3 |
synovial membrane of synovial joint | 5.93e-08 | 3 |
gallbladder | 6.34e-08 | 3 |
gall bladder primordium | 6.34e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 6.31e-21 | 1 |
cutaneous T cell lymphoma | 6.31e-21 | 1 |
mycosis fungoides | 6.31e-21 | 1 |
lymphoma | 6.80e-09 | 10 |