FFCP PHASE1:Hg19::chr5:59189853..59189865,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-228bp_to_ENST00000340635_5end | |association_with_transcript=-228bp_to_ENST00000340635_5end | ||
|cluster_id=chr5:59189853..59189865,- | |||
|description=CAGE_peak_68_at_PDE4D_5end | |description=CAGE_peak_68_at_PDE4D_5end | ||
|id=chr5:59189853..59189865,- | |id=chr5:59189853..59189865,- | ||
|ontology_enrichment_celltype=CL:0002504!4.29e-10!3;CL:1000279!4.29e-10!3;CL:1000280!4.29e-10!3;CL:0002367!2.45e-07!2;CL:1000487!7.53e-07!2 | |ontology_enrichment_celltype=CL:0002504!4.29e-10!3;CL:1000279!4.29e-10!3;CL:1000280!4.29e-10!3;CL:0002367!2.45e-07!2;CL:1000487!7.53e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002363;2.37e-15;2!CL:0002563;1.82e-08;4!CL:0000243;1.07e-07;15!CL:0000125;1.07e-07;15!CL:0000095;5.58e-07;17!CL:0002537;6.39e-07;5!CL:0000349;6.48e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002363,2.74e-15,2;CL:0000008,2.74e-15,2;CL:0002563,1.82e-08,4;CL:0000243,1.06e-07,15;CL:0000125,1.06e-07,15;CL:0000030,1.06e-07,15;CL:0000339,1.06e-07,15;CL:0000095,5.50e-07,17;CL:0000123,5.50e-07,17;CL:0002537,6.39e-07,5;CL:0000349,6.57e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000008;2.37e-15;2!UBERON:0006238;2.24e-11;10!CL:0000339;1.07e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;1.64e-10;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.60e-10,11 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001000;3.16e-29;1!UBERON:0005352;3.16e-29;1!UBERON:0003566;2.37e-15;2!UBERON:0001777;2.37e-15;2!UBERON:0006947;1.09e-10;3!UBERON:0004054;1.09e-10;3!UBERON:0001242;1.82e-08;4!UBERON:0001262;1.82e-08;4!UBERON:0004786;1.82e-08;4!UBERON:0004808;1.82e-08;4!UBERON:0001277;1.82e-08;4!UBERON:0005904;2.43e-08;4!UBERON:0003891;2.43e-08;4!UBERON:0000964;2.43e-08;4!UBERON:0010409;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001000,2.37e-29,1;UBERON:0005352,2.37e-29,1;UBERON:0003566,2.74e-15,2;UBERON:0001777,2.74e-15,2;UBERON:0006947,9.90e-11,3;UBERON:0004054,9.90e-11,3;UBERON:0001242,1.82e-08,4;UBERON:0001262,1.82e-08,4;UBERON:0004786,1.82e-08,4;UBERON:0004808,1.82e-08,4;UBERON:0001277,1.82e-08,4;UBERON:0005904,2.26e-08,4;UBERON:0003891,2.61e-08,4;UBERON:0000964,2.61e-08,4;UBERON:0010409,2.61e-08,4;UBERON:0004348,2.61e-08,4;UBERON:0005427,2.61e-08,4 | |||
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| ||
|short_description=p68@PDE4D | |short_description=p68@PDE4D | ||
}} | }} |
Latest revision as of 08:04, 18 September 2015
Short description: | p68@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_68_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | -228bp_to_ENST00000340635_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratocyte | 2.74e-15 | 2 |
migratory cranial neural crest cell | 2.74e-15 | 2 |
intestinal epithelial cell | 1.82e-08 | 4 |
glial cell (sensu Vertebrata) | 1.06e-07 | 15 |
glial cell | 1.06e-07 | 15 |
glioblast | 1.06e-07 | 15 |
glioblast (sensu Vertebrata) | 1.06e-07 | 15 |
neuron associated cell | 5.50e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.50e-07 | 17 |
amnion mesenchymal stem cell | 6.39e-07 | 5 |
extraembryonic cell | 6.57e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
vas deferens | 2.37e-29 | 1 |
spermatic cord | 2.37e-29 | 1 |
head connective tissue | 2.74e-15 | 2 |
substantia propria of cornea | 2.74e-15 | 2 |
male genital duct | 9.90e-11 | 3 |
internal male genitalia | 9.90e-11 | 3 |
intestinal mucosa | 1.82e-08 | 4 |
wall of intestine | 1.82e-08 | 4 |
gastrointestinal system mucosa | 1.82e-08 | 4 |
gastrointestinal system epithelium | 1.82e-08 | 4 |
intestinal epithelium | 1.82e-08 | 4 |
duct of male reproductive system | 2.26e-08 | 4 |
stroma | 2.61e-08 | 4 |
cornea | 2.61e-08 | 4 |
eye surface | 2.61e-08 | 4 |
optic eminence | 2.61e-08 | 4 |
corneal primordium | 2.61e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.60e-10 | 11 |