FFCP PHASE1:Hg19::chr2:71828394..71828407,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8291 | |EntrezGene=8291 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3097 | |HGNC=3097 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000472873,uc010yqz.1_5end | |association_with_transcript=0bp_to_ENST00000472873,uc010yqz.1_5end | ||
|cluster_id=chr2:71828394..71828407,+ | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_21_at_DYSF_5end | |description=CAGE_peak_21_at_DYSF_5end | ||
|id=chr2:71828394..71828407,+ | |id=chr2:71828394..71828407,+ | ||
|ontology_enrichment_celltype=CL:0000667!2.52e-30!6;CL:0000058!2.52e-30!6;CL:0000138!2.52e-30!6;CL:0000153!1.73e-20!9;CL:0000447!1.73e-20!9;CL:0000327!1.98e-13!14;CL:0000499!2.96e-07!27 | |ontology_enrichment_celltype=CL:0000667!2.52e-30!6;CL:0000058!2.52e-30!6;CL:0000138!2.52e-30!6;CL:0000153!1.73e-20!9;CL:0000447!1.73e-20!9;CL:0000327!1.98e-13!14;CL:0000499!2.96e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.50e-09;6!CL:0000153;8.61e-07;9!CL:0000447;8.61e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.44e-09,6;CL:0000138,1.44e-09,6;CL:0000153,8.37e-07,9;CL:0000447,8.37e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006965;8.10e-26;2!UBERON:0004872;2.26e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!2.91e-26!7;UBERON:0002370!3.82e-21!4;UBERON:0005058!3.82e-21!4;UBERON:0009113!3.82e-21!4;UBERON:0003295!3.82e-21!4;UBERON:0005562!3.82e-21!4;UBERON:0002363!9.43e-21!1;UBERON:0007647!9.43e-21!1;UBERON:0010115!9.43e-21!1;UBERON:0003351!1.90e-14!6;UBERON:0002360!4.52e-11!2;UBERON:0000094!4.52e-11!2;UBERON:0007645!4.52e-11!2;UBERON:0000974!4.75e-09!10;UBERON:0003408!4.75e-09!10;UBERON:0001042!4.75e-09!10;UBERON:0009145!4.75e-09!10;UBERON:0006562!2.62e-08!11;UBERON:0009722!2.62e-08!11;UBERON:0007690!2.62e-08!11;UBERON:0002110!6.78e-08!3;UBERON:0006242!6.78e-08!3;UBERON:0002106!7.76e-08!3;UBERON:0004854!7.76e-08!3;UBERON:0009034!7.76e-08!3;UBERON:0002095!7.76e-08!3;UBERON:0004782!7.76e-08!3;UBERON:0003281!7.76e-08!3;UBERON:0009664!7.76e-08!3;UBERON:0002296!7.76e-08!3;UBERON:0005602!7.76e-08!3;UBERON:0001179!7.76e-08!3;UBERON:0006293!7.76e-08!3;UBERON:0005057!1.49e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.68e-99;2!UBERON:0005058;5.68e-99;2!UBERON:0009113;5.68e-99;2!UBERON:0004177;1.81e-40;5!UBERON:0005057;1.81e-40;5!UBERON:0000077;1.98e-08;27!UBERON:0002405;1.98e-08;27!UBERON:0001638;8.61e-07;9!UBERON:0003920;8.61e-07;9!UBERON:0004582;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.11e-50,4;UBERON:0005058,3.11e-50,4;UBERON:0009113,3.11e-50,4;UBERON:0003295,3.11e-50,4;UBERON:0005562,3.11e-50,4;UBERON:0003351,5.98e-34,6;UBERON:0004177,2.74e-29,7;UBERON:0005057,2.74e-29,7;UBERON:0000974,6.99e-21,10;UBERON:0003408,6.99e-21,10;UBERON:0001042,6.99e-21,10;UBERON:0009145,6.99e-21,10;UBERON:0006562,4.28e-19,11;UBERON:0009722,4.28e-19,11;UBERON:0007690,4.28e-19,11;UBERON:0008814,4.07e-12,18;UBERON:0001557,1.55e-11,19;UBERON:0004807,3.65e-08,28;UBERON:0000077,6.44e-08,29;UBERON:0001638,8.85e-07,9;UBERON:0003920,8.85e-07,9;UBERON:0004582,8.85e-07,9;UBERON:0002368,9.98e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.4277246311407,4.59352885789349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0.795285947051099,1.45990461090791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.4277246311407,4.59352885789349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00636896795513,0 | ||
|short_description=p21@DYSF | |short_description=p21@DYSF | ||
}} | }} |
Latest revision as of 08:15, 18 September 2015
Short description: | p21@DYSF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_DYSF_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000472873, uc010yqz.1_5end |
EntrezGene: | DYSF |
HGNC: | 3097 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.44e-09 | 6 |
chondrocyte | 1.44e-09 | 6 |
GAG secreting cell | 8.37e-07 | 9 |
carbohydrate secreting cell | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
thymus | 3.11e-50 | 4 |
hemolymphoid system gland | 3.11e-50 | 4 |
thymic region | 3.11e-50 | 4 |
pharyngeal gland | 3.11e-50 | 4 |
thymus primordium | 3.11e-50 | 4 |
pharyngeal epithelium | 5.98e-34 | 6 |
hemopoietic organ | 2.74e-29 | 7 |
immune organ | 2.74e-29 | 7 |
neck | 6.99e-21 | 10 |
gland of gut | 6.99e-21 | 10 |
chordate pharynx | 6.99e-21 | 10 |
pharyngeal region of foregut | 6.99e-21 | 10 |
pharynx | 4.28e-19 | 11 |
entire pharyngeal arch endoderm | 4.28e-19 | 11 |
early pharyngeal endoderm | 4.28e-19 | 11 |
pharyngeal arch system | 4.07e-12 | 18 |
upper respiratory tract | 1.55e-11 | 19 |
respiratory system epithelium | 3.65e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 6.44e-08 | 29 |
vein | 8.85e-07 | 9 |
venous blood vessel | 8.85e-07 | 9 |
venous system | 8.85e-07 | 9 |
endocrine gland | 9.98e-07 | 35 |