FFCP PHASE1:Hg19::chr17:79826116..79826136,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=396 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=678 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=362bp_to_BC007630_5end | |||
|cluster_id=chr17:79826116..79826136,- | |||
|coexpression_cluster_id=C2444 | |||
|description=CAGE_peak_6_at_ARHGDIA_5end | |||
|id=chr17:79826116..79826136,- | |||
|ontology_enrichment_celltype=CL:0002371!4.50e-15!591;CL:0000144!2.99e-14!625;CL:0000548!2.13e-12!679;CL:0000004!2.13e-12!679;CL:0000255!2.13e-12!679;CL:0000055!3.91e-12!180;CL:0000012!2.27e-11!682;CL:0000220!1.97e-09!246;CL:0002321!3.10e-09!248;CL:0000057!6.23e-09!75;CL:0000222!1.26e-08!119;CL:0000003!1.41e-08!722;CL:0000723!1.69e-08!436;CL:0000048!8.20e-08!430;CL:0000034!1.05e-07!444;CL:0000063!7.53e-07!578 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.50e-09,433;CL:0000034,6.54e-09,441;CL:0000222,6.63e-09,121;CL:0002321,7.16e-09,250;CL:0000048,8.60e-09,427;CL:0000057,1.91e-08,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.27e-08,315;UBERON:0004120,2.27e-08,315;UBERON:0006603,2.27e-08,315;UBERON:0007503,6.88e-08,78 | |||
|phase1_expression=1.99846217197612,12.631930909568,1.40954404095971,4.00293193412522,4.46961094427288,4.36169262050184,0,3.79031924056099,2.61185628199839,2.21160542851358,14.653824527421,2.40285509343189,2.37390280405608,0.74259811776028,0.994192127183747,4.70627602516243,3.01347264011988,3.65155045193687,3.41552959153355,1.23121058076788,5.91602004608334,1.56727360739044,0.286235987131057,3.69560947696787,2.38531015230125,3.20936304141395,3.44822475689772,2.2826126580967,0.393364276848904,0,0.309632246632152,5.51652734687356,1.50602959389125,1.10926203050036,0.309868802321207,0.568676929949686,0.293600439334847,0,5.81578897663411,1.51907609501096,0.671746422719773,0.32389366601898,0.515151135268373,8.72389432677388,2.64513160582167,2.66842467306598,7.90258725479328,2.05583944010913,3.40677007984614,8.05538698502021,3.33008918487831,2.12834006899727,2.75796544589295,1.29096936716765,0,9.41211697713024,6.27684145133045,1.57306439111559,9.79468455586888,2.88836124368484,1.27867425159808,5.93732340336089,3.59034583718937,2.55734850319616,6.96502172708602,2.26954089876456,4.35975574296902,5.52747063564835,4.17186334736161,2.17188844705117,5.44859552370032,2.57794345191295,2.53169909952708,1.26753171787165,0.850417199860174,0.419317291016752,0.561643155732475,0.300353785683013,0.964353520182481,0.285012743741249,0.79566670879636,0.365328307529268,0,0,0.889509253863555,0,0.800791974072025,0,0,0.954053754535364,0.569212969109448,1.17447437874188,1.14681968437569,0,0,0,0.590129310341499,1.96505381374582,2.67281948699362,1.5046784585161,0.651844533267181,0,0,1.55974639639243,0.589211814949674,0.886135578334485,0.541607727530031,2.5618263945135,1.95089021339817,1.80881695064044,1.93445012450094,0.579606171470105,0.889719378972363,0.267540828089713,1.04535523804977,0.679856056185397,0,0.34362744548263,0.759059076058509,0.318565414324097,0,0.950452044448374,0.301150238155546,0.76791966692651,0,0.473554504088034,0.821127996921047,1.20964045934839,3.7441627409691,1.15859523106239,0,2.01210257911091,0.767175371061182,5.42158728576849,1.00267582127178,5.5041677205113,1.5905718941022,0,0.850813354476611,2.66075276955077,1.75669571386252,0.785874452986276,1.45718115317017,3.70784442784429,0,0.522389211897802,1.19662164466979,0.238490624305342,0,0,0.79504962946682,1.72046919021225,1.73570250803797,0.56530794192401,9.22898759661793,13.7559020970034,2.50793959844173,0.516833518338658,1.77883131343355,1.00416183829401,4.83395180530976,1.52054421143703,10.2506064170231,1.10298924103761,12.1521292182264,1.51809538082936,0.22452937262617,1.0135033243499,3.06633274931766,0.949265659568129,0.916008719652036,1.31780417436063,0,1.3082821564276,0,3.67228483827281,0.529636723252875,3.15520282823695,8.86670955495893,3.92474320099615,0,11.3467072271894,0.622422070799533,1.88594940897563,3.10577615915572,0.605429710579726,2.88087962239999,0.937285727335186,1.24864030732128,0.570471821544449,4.03511437489863,4.46251094846307,2.75184005425824,3.23036855415172,1.22492502752936,5.40470996171779,2.6864703105699,2.37600571456411,4.20353779773547,1.82032272387605,8.62341770179486,1.0100166837244,6.38104451347017,1.10825646193673,2.63386572528503,7.35570709917647,3.30523729594513,1.02088964844019,3.7671823494661,0.85422955527427,1.69545520927649,2.40072876867522,3.50378599410692,2.57640540045629,1.67505170698431,0.843881661206331,3.50773218580315,3.02920529092937,1.84099797284599,0.969876340912871,3.55009592516614,4.33234022378853,2.88253006927829,1.35282597214308,0.818238361772504,1.14721838155602,1.21973706129595,0.662648841607426,1.04574548582567,1.86589899027667,1.7662459561294,0.72995471815166,1.56449532329816,10.935095949279,6.90674606762403,1.85747171212792,5.0531563716871,2.60274960087657,2.02301628093722,3.37415441836875,2.64705534557745,3.92182999366331,1.89816495288877,3.7752766284846,2.5508790466295,2.69323009862473,8.85786545549578,1.40241773803446,1.2347220339942,7.3504355692771,1.26755034821831,3.9313088667105,0.590789906681404,0.441463099414651,0.983907508344908,0.686271241194102,4.93876284338815,2.24803506515239,3.9206299240536,1.20364978706088,1.3032332212413,4.15973914111831,5.77325368101093,0.34779121492523,0.117408694235822,2.45422961193825,3.70388410061289,3.23432058798817,3.95102198979638,3.43394464837949,0.738651018262192,1.17002132569619,1.78357394746474,0,2.68771405118175,2.55195175036296,0.53735113621709,1.16253575405585,1.53353071666084,0,1.32072651019839,2.69526550203004,2.73827911492227,3.02981840223312,0.952468414382536,6.11181480893244,3.51652341630141,3.4214489204541,5.96399457679276,1.8020583470635,4.85904935471983,2.46688385559794,3.48768055066624,3.8135908626894,0.646358578788889,0,3.381211010224,1.59562869950922,5.2003718455683,1.54324424557285,1.41849132023278,3.99633268524149,1.14382394926518,2.71310802695722,1.64648067356154,0.65147236858747,1.06617584622764,3.16780749173372,1.20575750823834,0.871533458600294,4.79870357673874,6.08118903205952,4.01805673145701,2.10833939483032,2.39624855491583,3.44585807502342,0,1.30303176000821,4.52047909610843,2.14873155887875,0.784596007954691,0.985153801009636,2.80315847317372,1.66845947163673,3.30323011489202,0,3.09315525111078,1.50764638800914,3.82763250991898,5.24304916763028,14.9580729602012,3.72973962092432,1.34960640891054,6.00204625271613,2.71265023699736,2.07970861530807,8.92144943985809,3.31175071571263,2.45996971484698,0.601892199455438,2.27407504055985,8.27784570340039,1.99267679560631,1.10621501125022,4.08352987999989,3.72022199179207,6.51972505240626,1.03384013061444,3.8828556147351,3.09509917629989,1.5156378572313,9.98612637062982,5.44302527993425,1.48864684691266,1.2276957863045,4.77122160536225,2.05022638809122,1.53512174720011,3.37793234401576,5.93672265779964,10.6404688723832,4.79416658345443,1.97105174433142,19.212413879794,7.43746422143739,1.45031339509947,10.8273493963774,6.72191219232043,2.52591785962135,7.82992022428883,5.37610101333639,0,1.46329140498388,1.56869953835371,5.84556898613043,1.05551628892876,9.09867072567173,4.93271745301895,2.15915916102139,20.0495428497376,1.35473218771926,5.01689773854853,1.78413391131527,1.66215201785745,2.91037181138832,0.438519753291869,0,0,0.328014645699706,2.27764876265012,0.515205058238611,6.22672360764735,1.40266149865,4.01985876597321,13.0012049207304,3.21367859688319,2.22342652071881,1.69453478826109,3.22357716924872,2.61889487720608,1.50388342815583,4.20548412351263,2.64202544989913,0.534192213880424,2.97512847649761,2.69066094311149,0.893288987462089,2.32662895967765,11.6211387324321,4.09256050879832,2.7881490806424,0.308033580176089,3.19383618190213,1.73986598415015,0.74129687641568,0.429374660225974,0.372158369359667,1.58189712359363,2.66882271493355,2.81487570442467,1.28381696410176,1.27281299170375,5.49464048139461,1.61885211824983,4.66712950551293,2.12062324222236,2.83055474202642,4.75530963519025,0.842516912477962,2.43816869544795,9.26111260598881,8.45201174054043,1.36499911407986,9.19135307699133,3.39024349860728,1.10273068709225,11.941901554342,7.0152141640602,1.73632660280006,1.31178950409327,1.42037263873893,4.3375289733965,3.66204283291914,1.14729081763241,0.982490410131212,1.426684205925,4.25713276884717,6.33322905892992,3.29294892959902,1.89736586882858,2.79947776195986,0.769776901804097,6.03272047982209,4.3556393944529,0.847294206991012,1.72202149068492,5.05414427002877,3.99087138183008,0.459446800413919,1.52234282769651,0,2.27858874869665,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,3.96562588147135,1.38871292465715,0,1.96032172784825,1.11481905075431,0.577076851905779,0.355709216742071,0.797131363644112,3.19326994292507,0.5745161103971,1.2700414963433,1.62310970137278,0.842391534340376,1.14117339516596,4.7003968731907,2.50634477090067,0.50787533340481,1.605880751037,2.21979677910152,0.851692475380653,0.343505344755765,1.53620382154229,0.447352215784832,0.834245708559542,2.73543333562856,0.835218521685727,0,1.35227839237992,0,0,0.18714054040822,1.17206543417515,0.36408156524854,0.66866030566487,2.84136146806413,0.23874448473769,0.593929361665277,0,0.994147647766298,1.1253553312841,0.556543525114529,0.824019371133798,0.63337622438398,1.59398390600856,1.38141957765574,1.51159648712566,0.409074730008619,0.369254416383208,2.48831670129446,0.269605053441981,0.716084698702437,1.02314474045374,0.591860433821602,2.3948309234694,2.22273980289274,0,1.02044907978036,0,0.520855522170466,0.262379999988587,0,1.2517279311405,1.27126825146383,1.18193840883968,0.344743373241465,1.16641845353302,1.73624994933292,3.54296554325536,1.5677537021303,0,0.774054819518572,0.295547618953547,0.87754158861589,0.435753854075961,0.41827123283581,0.538651809526579,0.227884111694002,0.23056390438806,0.807818799687949,0.108647371922008,0,1.74035427463538,0.533034776018635,3.06579894587209,0.156980256395025,0,0.225595660617181,0.392125068635479,1.00692952185506,0.189753732724185,0.794682894901893,3.58696709697646,0.163232808159148,0.141353071433941,0.649165919226273,0,0.884575645033392,0.611030144933625,0,0.86494757262552,0.626531697032732,0.337005664903385,0,1.87411556580271,5.10873409803865,0,0.485560759068186,1.18375320854817,1.20990716048664,0.61214552326098,1.26373159256976,2.1045278718029,1.65901106235595,0.664653872707185,0.992975867626496,0.313932918407225,1.19472429772959,0.569219092059585,0.138674673013139,4.85967267338367,0.293977192243133,1.39294730528644,2.27144668714639,0.51595809741485,2.22539561964896,1.24251839046515,2.46346371159628,1.45483524732629,0,1.12990370390266,1.09633539717401,0.794858446811959,0.316553979779393,0.195551382734803,0.320635281006135,2.13452994739353,1.59847687665704,0.576361668616424,0.114536596165916,2.05913997434357,0.720273989940749,0.745515213392595,0,0.135904206073614,0.836822770498666,0.407992870545287,0.866851769704557,0.600420288709789,1.36905378891993,0,0,0.525774708558629,0.837847203816763,0,0.717873024576814,1.19807400299395,2.57535628881943,0.223171457441873,0.201550417460179,0.720599767084807,0,1.96957955768059,2.71972332657849,1.48287796479207,0.590564889088493,0.338693328263138,0.795229689809303,1.0896272488926,1.76828463311521,2.06309154895851,2.07720169014593,0.2249738915515,0.77380195455795,0.485996453264197,0.335434687599266,1.65491985328316,0.209818352539992,0.211200673038813,1.43429871466276,0.191915197319445,1.42939065274673,0.662091970365432,0.5085370753095,10.3169924333205,10.3706578944152,14.0432564847046,0,0.656740165994712,2.3854323049959,0.679872549120754,1.75862680413699,1.32506888912221,0.387848869084652,1.45455861916959,0,0,0.961086713109252,0.157204305099666,2.07119527673598,5.45782623993146,0.988058159489721,1.21792598380896,0,0,0.5013797880454,0.306345576763462,0,0.157054096250234,0.886068179966986,4.75902433117656,0.876336514945499,1.14681839138014,0.554645257684261,0.372578417648301,1.93688088910723,0.249960815924213,1.06154382279153,2.85465333544967,3.76425311517075,3.74667924645505,1.1593682288866,1.34329322598187,1.40227985908335,1.66441758450784,1.13641803165053,0.754703705257725,5.33886732957922,1.14420034198462,1.51230923763239,1.08806040407946,1.62640664988597,1.75226443880073,1.34940933649081,1.70789252563885,5.80588690977198,2.12673371646396,7.30443086536427,1.50257608997218,3.80805212168795,0.813741466409323,1.45478927362048,1.39633724155235,1.85613503951397,4.77715066438339,4.80033317595784,0.686791410365586,2.69399591012735,0,0.385239660814607,0.857766365499703,1.82696004375648,1.13352962756136,2.54674721756217,1.71315693154527,5.01448755028165,5.24962460173653,1.53498834705095,6.36080925405172,2.50788249752189,2.19625172848994,3.8436227788192,4.49059444250558,3.64631947412859,0.691292180758654,1.7537427795545,1.19578356282027,0.327130788511688,1.31043939538565,0.983091635014877,0.211312123358627,0.59996218756479,0.426766918776564,0.688859918643263,0.567515953566836,2.02516545277025,0.279759015438889,0.622077260032973,0.255788742607303,0.646948868380091,0.314531883711793,0.873677105536111,0.678930119816101,1.48802444071178,1.73510069962603,1.11728983594649,0.318004350653419,0,0,1.76337971845342,3.9811912055916,0.321146125482298,1.41696576325585,0.638535436228605,1.02558182120378,1.26035848110859,0.414943514785307,1.61475645631851,0,0.88332946650923,0.943757786781923,2.01771458373847,1.61735932610474,1.1441462864015,0,0.596748666348824,0.977734268540344,1.41193548092464,3.12605604493237,1.30953347240711,6.55087670040387,1.03499260351932,0.0675375846183947,0.781078098613847,0.206686796501184,0.317079050969534,2.18789923607288,2.19303106742873,1.98484471355718,3.34155364283279,0.638812138197976,0,0,1.21393120847326,0.91064876540519,0.354809480650555,1.61327582578091,0.342976018874837,0.203909198930495,0.72350050919134,0.827356886187777,0.222462803784138,0.39246546425257,1.72827148907602,0,1.82631744101899,1.51149313853035,1.43325506366115,0.428859265059938,0.316027223465453,0.697448552208751,0.173858272302579,0,1.03608082081518,2.0486217251274,0.691259661814092,0,0.828324005113957,0.852134047591577,0.423387050190929,1.60374807980835,2.79185747097888,7.64431151181946,0.447421727191169,0.490751168076215,0.853425474875886,0.647428837187895,0.821302454849976,2.3196288626764,0.971421986118279,0.233939463462106,1.98950775161368,0.475680363110274,0.5647304101948,0.989464650708862,0.603851374266694,1.23478652972711,4.15263164957519,0.470317296361523,1.22574160876953,0,2.74831853960923,0,0.4226557275834,0.679708458751268,1.12780701575824,0.837952543656503,0.89947040332436,0,1.05868461514708,0.481448200135009,0,2.2936464170227,1.72007499781742,0.157771562193185,0.475940431336403,2.18175345170189,2.1161073620616,9.29987545416878,4.62175628631418,5.19151874548547,0.378499274505237,0.655593431782173,2.78736702225161,1.01988829741982,1.06886962106224,0.459474497674225,1.25353769646188,1.28823786971007,2.67964130156179,0.829169439458779,0.930896962757057,1.0661699095049,0.952257725854961,1.55013383606415,0.744896571550295,0.897054900644907,0.509177266225319,0.808468755832877,2.8303177226605,1.36893320434112,0.673520530145875,0.573777643141411,2.32862249582209,0.732629417498771,0.640364075266293,0,1.07790242527904,0,0.488965776731466,0.406896178315738,1.99727032255654,3.42165449104745,1.9234109538194 | |||
|short_description=p6@ARHGDIA | |||
}} |
Latest revision as of 08:53, 18 September 2015
Short description: | p6@ARHGDIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ARHGDIA_5end |
Coexpression cluster: | C2444_Alveolar_Endothelial_Smooth_leiomyoma_Preadipocyte_Hair_Renal |
Association with transcript: | 362bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
somatic stem cell | 1.50e-09 | 433 |
stem cell | 6.54e-09 | 441 |
mesodermal cell | 6.63e-09 | 121 |
embryonic cell | 7.16e-09 | 250 |
multi fate stem cell | 8.60e-09 | 427 |
fibroblast | 1.91e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 2.27e-08 | 315 |
mesoderm-derived structure | 2.27e-08 | 315 |
presumptive mesoderm | 2.27e-08 | 315 |
epithelial vesicle | 6.88e-08 | 78 |