FFCP PHASE1:Hg19::chr17:79826202..79826231,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=396 | |EntrezGene=396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=678 | |HGNC=678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=267bp_to_BC007630_5end | |association_with_transcript=267bp_to_BC007630_5end | ||
|cluster_id=chr17:79826202..79826231,- | |||
|coexpression_cluster_id=C2444 | |||
|description=CAGE_peak_3_at_ARHGDIA_5end | |description=CAGE_peak_3_at_ARHGDIA_5end | ||
|id=chr17:79826202..79826231,- | |id=chr17:79826202..79826231,- | ||
|ontology_enrichment_celltype=CL:0002371!2.25e-21!591;CL:0000144!3.57e-19!625;CL:0000548!1.67e-17!679;CL:0000004!1.67e-17!679;CL:0000255!1.67e-17!679;CL:0000012!1.61e-16!682;CL:0000003!4.32e-15!722;CL:0000723!4.64e-14!436;CL:0000055!2.91e-13!180;CL:0000034!4.12e-13!444;CL:0000048!6.11e-13!430;CL:0000063!1.09e-10!578;CL:0000057!4.86e-10!75;CL:0000222!1.79e-08!119;CL:0000220!5.39e-08!246;CL:0002057!5.47e-08!42;CL:0000860!6.23e-08!45;CL:0002320!9.86e-08!365;CL:0002321!1.01e-07!248;CL:0000134!2.74e-07!358;CL:0000219!5.32e-07!390 | |ontology_enrichment_celltype=CL:0002371!2.25e-21!591;CL:0000144!3.57e-19!625;CL:0000548!1.67e-17!679;CL:0000004!1.67e-17!679;CL:0000255!1.67e-17!679;CL:0000012!1.61e-16!682;CL:0000003!4.32e-15!722;CL:0000723!4.64e-14!436;CL:0000055!2.91e-13!180;CL:0000034!4.12e-13!444;CL:0000048!6.11e-13!430;CL:0000063!1.09e-10!578;CL:0000057!4.86e-10!75;CL:0000222!1.79e-08!119;CL:0000220!5.39e-08!246;CL:0002057!5.47e-08!42;CL:0000860!6.23e-08!45;CL:0002320!9.86e-08!365;CL:0002321!1.01e-07!248;CL:0000134!2.74e-07!358;CL:0000219!5.32e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.44e-10;33!CL:0002057;4.44e-10;33!CL:0000473;8.89e-08;39!CL:0000234;8.89e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000723,1.11e-13,433;CL:0000034,8.85e-13,441;CL:0000048,1.41e-12,427;CL:0000057,5.99e-10,76;CL:0000222,2.44e-08,121;CL:0000860,6.21e-08,42;CL:0002057,6.21e-08,42;CL:0000473,8.10e-08,48;CL:0000234,8.10e-08,48;CL:0002320,1.32e-07,361;CL:0002321,1.39e-07,250;CL:0000134,3.64e-07,354;CL:0000219,8.77e-07,386 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.92e-09!216;UBERON:0002204!3.83e-08!167;UBERON:0002199!1.66e-07!45;UBERON:0002416!1.66e-07!45;UBERON:0001637!3.61e-07!42;UBERON:0003509!3.61e-07!42;UBERON:0004572!3.61e-07!42;UBERON:0002384!5.05e-07!375;UBERON:0003102!6.48e-07!95;UBERON:0001981!8.43e-07!60;UBERON:0007500!8.43e-07!60;UBERON:0004537!8.43e-07!60;UBERON:0006965!8.43e-07!60 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,1.21e-09,315;UBERON:0004120,1.21e-09,315;UBERON:0006603,1.21e-09,315;UBERON:0003081,3.04e-08,203;UBERON:0002204,5.78e-08,167;UBERON:0002199,1.11e-07,46;UBERON:0002416,1.11e-07,46;UBERON:0001637,3.89e-07,42;UBERON:0003509,3.89e-07,42;UBERON:0004572,3.89e-07,42;UBERON:0003102,4.44e-07,99;UBERON:0007500,6.61e-07,59;UBERON:0001981,6.61e-07,59;UBERON:0004537,6.61e-07,59;UBERON:0006965,6.61e-07,59;UBERON:0002384,7.29e-07,371 | |||
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| ||
|short_description=p3@ARHGDIA | |short_description=p3@ARHGDIA | ||
}} | }} |
Latest revision as of 08:56, 18 September 2015
Short description: | p3@ARHGDIA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ARHGDIA_5end |
Coexpression cluster: | C2444_Alveolar_Endothelial_Smooth_leiomyoma_Preadipocyte_Hair_Renal |
Association with transcript: | 267bp_to_BC007630_5end |
EntrezGene: | ARHGDIA |
HGNC: | 678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data