FFCP PHASE1:Hg19::chr1:164559583..164559590,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000496120_5end | |association_with_transcript=0bp_to_ENST00000496120_5end | ||
|cluster_id=chr1:164559583..164559590,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_50_at_PBX1_5end | |description=CAGE_peak_50_at_PBX1_5end | ||
|id=chr1:164559583..164559590,+ | |id=chr1:164559583..164559590,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002327;5.56e-26;4!CL:0000182;1.33e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,5.56e-26,4;CL:0000182,1.33e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.37e-99;1!UBERON:0004161;2.37e-10;11!UBERON:0009497;5.70e-09;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;5.56e-26;4!DOID:1612;5.56e-26;4!DOID:7;8.88e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,5.56e-26,4;DOID:1612,5.56e-26,4;DOID:7,2.03e-11,39 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.17e-08!115;UBERON:0001301!1.07e-07!1;UBERON:0006834!1.58e-07!1;UBERON:0002022!3.17e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;5.56e-26;4!UBERON:0002365;1.90e-14;31!UBERON:0002330;1.90e-14;31!UBERON:0000310;2.73e-11;10!UBERON:0001443;2.16e-10;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001911,5.56e-26,4;UBERON:0005333,5.56e-26,4;UBERON:0008425,5.56e-26,4;UBERON:0005311,5.56e-26,4;UBERON:0002365,5.04e-14,31;UBERON:0002330,5.04e-14,31;UBERON:0000076,9.39e-14,8;UBERON:0000310,2.73e-11,10;UBERON:0001443,2.16e-10,11;UBERON:0002530,5.66e-08,59 | |||
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|short_description=p50@PBX1 | |short_description=p50@PBX1 | ||
}} | }} |
Latest revision as of 09:18, 18 September 2015
Short description: | p50@PBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_50_at_PBX1_5end |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | 0bp_to_ENST00000496120_5end |
EntrezGene: | PBX1 |
HGNC: | 8632 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 5.56e-26 | 4 |
hepatocyte | 1.33e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
mammary gland | 5.56e-26 | 4 |
mammary bud | 5.56e-26 | 4 |
mammary ridge | 5.56e-26 | 4 |
mammary placode | 5.56e-26 | 4 |
exocrine gland | 5.04e-14 | 31 |
exocrine system | 5.04e-14 | 31 |
external ectoderm | 9.39e-14 | 8 |
breast | 2.73e-11 | 10 |
chest | 2.16e-10 | 11 |
gland | 5.66e-08 | 59 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 5.56e-26 | 4 |
breast cancer | 5.56e-26 | 4 |
disease of anatomical entity | 2.03e-11 | 39 |