FFCP PHASE1:Hg19::chr17:79849695..79849711,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10189 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19071 | |||
|TSSclassifier=strong | |||
|UniProt=Q86V81,E9PB61 | |||
|association_with_transcript=-233bp_to_ENST00000331204,ENST00000505490,NM_005782,uc002kbu.2_5end | |||
|cluster_id=chr17:79849695..79849711,- | |||
|description=CAGE_peak_6_at_ALYREF_5end | |||
|id=chr17:79849695..79849711,- | |||
|ontology_enrichment_celltype=CL:0000066!9.10e-18!254;CL:0000548!3.26e-14!679;CL:0000004!3.26e-14!679;CL:0000255!3.26e-14!679;CL:0000012!9.56e-14!682;CL:0000003!3.08e-10!722;CL:0000063!1.31e-09!578 | |||
|ontology_enrichment_celltype_v019=CL:0002188;2.21e-10;5!CL:1000449;4.79e-09;15!CL:1000497;6.03e-08;17!CL:0002518;6.03e-08;17!CL:1000746;1.54e-07;7!CL:1000612;1.54e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002188,2.79e-10,5;CL:1000449,5.44e-09,15;CL:1000497,6.74e-08,17;CL:0002518,6.74e-08,17;CL:1000746,1.82e-07,7;CL:1000612,1.82e-07,7;CL:0000511,7.19e-07,1;CL:0002625,7.19e-07,1;CL:0000216,7.19e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.63e-25!235;DOID:14566!4.03e-25!239;DOID:0050687!2.53e-14!143;DOID:305!8.51e-14!106;DOID:2531!7.27e-12!51;DOID:0060083!7.27e-12!51;DOID:0050686!2.28e-11!137;DOID:1240!1.00e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.84e-13;24!UBERON:0011143;1.84e-13;24!UBERON:0000489;6.35e-11;29!UBERON:0006554;1.62e-10;30!UBERON:0001008;1.62e-10;30!UBERON:0006555;4.79e-09;15!UBERON:0004819;4.79e-09;15!UBERON:0001285;4.79e-09;15!UBERON:0007684;4.79e-09;15!UBERON:0005172;2.21e-08;52!UBERON:0005173;2.21e-08;52!UBERON:0000074;1.54e-07;7!UBERON:0001229;1.54e-07;7!UBERON:0002417;9.88e-07;58!UBERON:0000916;9.88e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,2.26e-12,26;UBERON:0003918,2.26e-12,26;UBERON:0011143,2.26e-12,26;UBERON:0005095,2.26e-12,26;UBERON:0007687,2.26e-12,26;UBERON:0005172,5.10e-12,54;UBERON:0005173,5.10e-12,54;UBERON:0002417,1.41e-10,60;UBERON:0000916,1.41e-10,60;UBERON:0000489,3.58e-10,31;UBERON:0004211,5.44e-09,15;UBERON:0009773,5.44e-09,15;UBERON:0001231,5.44e-09,15;UBERON:0001285,5.44e-09,15;UBERON:0007684,5.44e-09,15;UBERON:0004208,5.44e-09,15;UBERON:0006555,2.07e-08,16;UBERON:0004819,2.07e-08,16;UBERON:0004876,4.69e-08,11;UBERON:0005177,1.41e-07,101;UBERON:0010532,1.82e-07,7;UBERON:0000074,1.82e-07,7;UBERON:0001229,1.82e-07,7;UBERON:0001230,1.82e-07,7;UBERON:0003220,1.82e-07,7;UBERON:0005749,1.82e-07,7;UBERON:0004199,1.82e-07,7;UBERON:0004209,1.82e-07,7;UBERON:0004198,1.82e-07,7;UBERON:0003887,3.10e-07,12;UBERON:0001136,7.19e-07,1;UBERON:0001343,7.19e-07,1;UBERON:0004910,7.19e-07,1;UBERON:0005154,7.19e-07,1;UBERON:0005295,7.19e-07,1;UBERON:0004813,7.19e-07,1;UBERON:0005297,7.19e-07,1;UBERON:0005294,7.19e-07,1;UBERON:0010141,7.19e-07,1;UBERON:0005891,7.19e-07,1 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,3.48900583986214,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.61560529038394,0.408001382488506,0,0,0.410623275218653,0.125542639594803,1.29902789771517,1.14940825229924,0.787107813136792,0,0.767658796194425,0,0.919421224478927,0.30120591877825,0.739508020333575,0.309868802321207,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0,1.09288586487763,0.741568885568859,0,0,0,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0.838998872419812,0,0.626984899610432,0.258416759169329,0,0,0.805658634218294,0,0.488124115096339,0.735326160691737,0.81014194788176,0.17859945656816,0,0.225222960966644,1.53316637465883,0.949265659568129,0.916008719652036,0,0,0.872188104285069,0,0,0.132409180813219,0,0,0,0,0,0,0.269421344139376,0.326923806226917,0,0,0,0,1.71141546463335,0,0.469737994575059,0,0.140450806702248,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0.250237039743928,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0.504867548488229,0,0.161646056818812,0,0,0.169560592310488,0.193260853163297,0,0,0.121973706129595,0.132529768321485,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0,0.946454400318751,1.18009283054671,0.964044119533928,0.772057809126758,1.08939722046203,0.71181185733329,0.404493924480493,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0.115930404975077,0.234817388471643,0,0.462985512576611,0.570762456703795,0.790204397959275,0,0,0,0,0.93733833986777,0,0.141775097242386,0.0895585227028483,0,1.91691339582606,0,0,0,0,0,0.063497894292169,0,0,1.71072446022705,0.308482478109971,0.300343057843917,0,1.23344192779897,0,0.4400297149257,0,0,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0,0,0.823240336780769,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0,0,0.343143423810856,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0.232420756919918,0.846016147141356,0.40101294060657,0,0.114814448164607,0.182091168006717,0.131124414959424,0,0.15403067420883,2.35304930753057,2.92278449306521,0,0,1.02056223165909,0.431831832204279,1.54227252690289,0.270946437543853,0.501689773854853,0.509752546090077,0,0.447749509444357,0,0.261435451024901,0.256450125116389,0,0,0,0.915694648183434,1.07262349896764,0,0,1.6068392984416,0.193341436584244,0.154048617114644,0.15350367472613,0.551346289938122,0.107420244868274,0,0.511359764496605,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.2023155617111,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0.54907405947211,0,0.606547444719948,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.6196469961995,0.563391205064483,0,0.0982490410131212,0.35667105148125,0.709522128141196,0,0,1.13841952129715,0,0.192444225451024,1.34060455107157,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,1.49553699578462,0,0.490080431962063,1.11481905075431,0.144269212976445,0.142283686696828,1.11598390910176,0.399158742865633,0.191505370132367,0.635020748171649,0,0,0.456469358066384,0.783399478865116,0,0,0.321176150207399,0.403599414382095,0.425846237690326,0,0,0.671028323677248,0.834245708559542,0.586164286206121,0.278406173895242,1.23087398947712,0.270455678475983,0.66614393599564,0,0,0,0.121360521749513,0.111443384277478,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0.422250816255987,0,0,0.755798243562828,0,0.123084805461069,0,0.179736702294654,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0.227586896570999,0.508507300585533,0,0.689486746482929,0.291604613383254,0.347249989866585,0,0,0,0,0,0,0,0,0,0.227884111694002,0.23056390438806,0.269272933229316,0,0,0.274792780205587,0,1.02193298195737,0.156980256395025,0.332423363800313,0.451191321234361,0.588187602953219,0.503464760927528,0.189753732724185,0.317873157960757,0.210998064528027,0.163232808159148,0.282706142867882,0.432777279484182,0,0.0884575645033392,0,0.889563386041866,0.741383633679017,0.208843899010911,0,0,0,0.547364367646998,0.391329237864179,0.485560759068186,0,0,0,0,4.50970258243478,1.45163467956146,0,0,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0,1.39294730528644,0,0.171986032471617,1.16107597546902,0.803982487948041,0.739039113478883,0.193978032976839,0.264768380074501,0,0.685209623233754,0.596143835108969,0,0,0,0,0.19980960958213,0.144090417154106,0.343609788497747,0.343189995723929,0.432164393964449,0.124252535565433,0.235694034616795,0.407712618220842,0.732219924186332,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,1.18174773460835,1.15382201733633,1.61768505250044,0,0.338693328263138,0,0,0.321506296930038,0.275078873194468,0,0,0,0,0,0,0,0,0,0.383830394638891,0,0,0,0.542999601753713,0,0,1.19730191562487,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974340787047167,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0.830091809617385,0,0.303298235083296,0,0,0.936669811613763,0.869526171664951,0.149254802886874,0.233713309847224,0,0,0,0,0,0,0,0.591420599958536,0,0.449803112163605,0.155262956876259,0.414706207840855,0,0,0.150257608997218,0,0.406870733204662,0,0.322231671127465,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0.521988583930423,0,0.231522474323834,0,0.537266523244462,0,0,0.176689145945881,1.92914038270915,0,1.02496607435179,0.345430341731199,0,0,0,0,0,0,0.245772908753719,0,0.39997479170986,0.213383459388282,0,0,0.184105950251841,0,0,0.127894371303652,0.862598491173454,0.471797825567689,0.436838552768056,0.509197589862076,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.353909170043221,0.183428598521679,0.231051332300676,0.762764190934334,0,0.397832444232549,0,0.20170506870352,0,0,0.49131575253029,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0.230467975111559,0,0,0,0.118193840883968,0.111231401892069,0,0,0.280272163313789,0,0.215927591218621,0.47775168788705,0,0.316027223465453,0.581207126840626,0,0,0,0,0,0,0,0.0852134047591577,0,0.4582137370881,0,0,0.447421727191169,0.196300467230486,0.121917924982269,0,0,0,0,1.16969731731053,0.397901550322736,0.118920090777569,0.67767649223376,0.329821550236287,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,1.09935271517422,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.504665699340316,0.764859003745869,1.77377901416012,0.305966489225945,0.801652215796681,0.0918948995348449,0.250707539292375,0,0,0,0.103432995861895,0.213233981900981,0,0.258355639344024,0.0620747142958579,0.112131862580613,0,0,0,0,0,0,0.332660356546013,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p6@ALYREF | |||
}} |
Latest revision as of 09:22, 18 September 2015
Short description: | p6@ALYREF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ALYREF_5end |
Coexpression cluster: | NA |
Association with transcript: | -233bp_to_ENST00000331204, ENST00000505490, NM_005782, uc002kbu.2_5end |
EntrezGene: | ALYREF |
HGNC: | 19071 |
UniProt: | Q86V81E9PB61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular endothelial cell | 2.79e-10 | 5 |
epithelial cell of nephron | 5.44e-09 | 15 |
kidney cell | 6.74e-08 | 17 |
kidney epithelial cell | 6.74e-08 | 17 |
glomerular cell | 1.82e-07 | 7 |
kidney corpuscule cell | 1.82e-07 | 7 |
androgen binding protein secreting cell | 7.19e-07 | 1 |
seminiferous tubule epithelial cell | 7.19e-07 | 1 |
Sertoli cell | 7.19e-07 | 1 |