FFCP PHASE1:Hg19::chr19:43244610..43244652,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5671 | |EntrezGene=5671 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9520 | |HGNC=9520 | ||
|TSSclassifier=strong | |||
|UniProt=Q16557 | |UniProt=Q16557 | ||
|association_with_transcript=15bp_to_NM_021016,uc002oue.2,uc010eil.2_5end | |association_with_transcript=15bp_to_NM_021016,uc002oue.2,uc010eil.2_5end | ||
|cluster_id=chr19:43244610..43244652,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_PSG3_5end | |description=CAGE_peak_1_at_PSG3_5end | ||
|id=chr19:43244610..43244652,- | |id=chr19:43244610..43244652,- | ||
|ontology_enrichment_celltype=CL:0002541!1.85e-08!3 | |ontology_enrichment_celltype=CL:0002541!1.85e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.63e-29;3!CL:0000349;2.75e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.63e-29,3;CL:0000349,2.80e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.53e-11;1 | |||
|ontology_enrichment_disease=DOID:17!4.15e-07!5;DOID:450!4.15e-07!5;DOID:66!4.15e-07!5;DOID:423!4.15e-07!5;DOID:0080000!4.15e-07!5;DOID:11722!4.15e-07!5 | |ontology_enrichment_disease=DOID:17!4.15e-07!5;DOID:450!4.15e-07!5;DOID:66!4.15e-07!5;DOID:423!4.15e-07!5;DOID:0080000!4.15e-07!5;DOID:11722!4.15e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:6193;5.57e-11;1!DOID:3371;1.46e-10;1!DOID:4549;1.46e-10;1!DOID:5861;1.46e-10;1!DOID:6496;1.46e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.57e-11,1;DOID:3371,1.61e-10,1;DOID:4549,1.61e-10,1;DOID:5861,1.61e-10,1;DOID:6496,1.61e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002294!2.28e-10!7;UBERON:0001173!2.28e-10!7;UBERON:0004912!2.28e-10!7;UBERON:0002394!4.90e-09!4;UBERON:0003928!4.90e-09!4;UBERON:0003124!7.73e-09!7;UBERON:0000476!1.85e-08!3;UBERON:0000920!1.85e-08!3;UBERON:0005631!1.25e-07!14;UBERON:0000158!1.25e-07!14;UBERON:0004923!2.34e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.63e-29;3!UBERON:0000920;1.63e-29;3!UBERON:0005631;1.42e-15;10!UBERON:0000158;1.42e-15;10!UBERON:0002146;1.46e-10;1!UBERON:0004913;1.46e-10;1!UBERON:0003703;1.46e-10;1!UBERON:0005623;1.46e-10;1!UBERON:0001174;1.46e-10;1!UBERON:0004914;1.46e-10;1!UBERON:0000478;5.97e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.63e-29,3;UBERON:0003124,1.85e-22,7;UBERON:0005631,4.01e-17,14;UBERON:0000158,4.01e-17,14;UBERON:0002146,1.21e-10,1;UBERON:0005623,1.21e-10,1;UBERON:0004913,1.46e-10,1;UBERON:0003703,1.46e-10,1;UBERON:0001174,1.46e-10,1;UBERON:0004914,1.46e-10,1;UBERON:0000478,6.09e-10,24 | |||
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| ||
|short_description=p1@PSG3 | |short_description=p1@PSG3 | ||
}} | }} |
Latest revision as of 09:58, 18 September 2015
Short description: | p1@PSG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSG3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 15bp_to_NM_021016, uc002oue.2, uc010eil.2_5end |
EntrezGene: | PSG3 |
HGNC: | 9520 |
UniProt: | Q16557 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.63e-29 | 3 |
extraembryonic cell | 2.80e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.63e-29 | 3 |
chorion | 1.85e-22 | 7 |
extraembryonic membrane | 4.01e-17 | 14 |
membranous layer | 4.01e-17 | 14 |
pulmonary valve | 1.21e-10 | 1 |
semi-lunar valve | 1.21e-10 | 1 |
hepatopancreatic ampulla | 1.46e-10 | 1 |
extrahepatic bile duct | 1.46e-10 | 1 |
common bile duct | 1.46e-10 | 1 |
duodenal papilla | 1.46e-10 | 1 |
extraembryonic structure | 6.09e-10 | 24 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.57e-11 | 1 |
chondrosarcoma | 1.61e-10 | 1 |
extraosseous chondrosarcoma | 1.61e-10 | 1 |
myxoid chondrosarcoma | 1.61e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.61e-10 | 1 |