FFCP PHASE1:Hg19::chr17:79970951..79970966,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79058 | |EntrezGene=79058 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13825 | |HGNC=13825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-143bp_to_AK127311_5end | |association_with_transcript=-143bp_to_AK127311_5end | ||
|cluster_id=chr17:79970951..79970966,+ | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_8_at_ASPSCR1_5end | |description=CAGE_peak_8_at_ASPSCR1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002541!1.56e-27!3 | |ontology_enrichment_celltype=CL:0002541!1.56e-27!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:305!1.75e-12!106;DOID:0050619!1.19e-10!1;DOID:1357!1.19e-10!1;DOID:0050687!1.08e-08!143 | |ontology_enrichment_disease=DOID:305!1.75e-12!106;DOID:0050619!1.19e-10!1;DOID:1357!1.19e-10!1;DOID:0050687!1.08e-08!143 | ||
|ontology_enrichment_disease_v019=DOID:5409;5.56e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:3119;2.00e-08;14!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | |ontology_enrichment_disease_v019=DOID:5409;5.56e-26;4!DOID:1325;1.65e-15;7!DOID:3904;1.65e-15;7!DOID:3905;2.19e-12;9!DOID:3119;2.00e-08;14!DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16 | ||
|ontology_enrichment_disease_v019_2=DOID:5409,5.56e-26,4;DOID:1325,1.65e-15,7;DOID:3904,1.65e-15,7;DOID:3905,2.19e-12,9;DOID:3119,2.00e-08,14;DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16 | |||
|ontology_enrichment_uberon=UBERON:0001737!1.17e-63!9;UBERON:0001557!1.02e-29!19;UBERON:0000476!1.56e-27!3;UBERON:0000920!1.56e-27!3;UBERON:0008947!1.28e-22!38;UBERON:0003258!1.28e-22!38;UBERON:0003124!1.01e-20!7;UBERON:0000072!1.97e-18!46;UBERON:0000065!8.41e-16!53;UBERON:0001004!1.09e-13!72;UBERON:0001764!1.19e-10!1;UBERON:0001825!1.19e-10!1;UBERON:0005631!1.75e-10!14;UBERON:0000158!1.75e-10!14;UBERON:0000063!1.00e-09!97;UBERON:0000077!3.40e-08!130;UBERON:0001041!7.48e-08!98;UBERON:0000064!8.12e-07!219;UBERON:0004921!8.20e-07!129;UBERON:0004185!8.20e-07!129 | |ontology_enrichment_uberon=UBERON:0001737!1.17e-63!9;UBERON:0001557!1.02e-29!19;UBERON:0000476!1.56e-27!3;UBERON:0000920!1.56e-27!3;UBERON:0008947!1.28e-22!38;UBERON:0003258!1.28e-22!38;UBERON:0003124!1.01e-20!7;UBERON:0000072!1.97e-18!46;UBERON:0000065!8.41e-16!53;UBERON:0001004!1.09e-13!72;UBERON:0001764!1.19e-10!1;UBERON:0001825!1.19e-10!1;UBERON:0005631!1.75e-10!14;UBERON:0000158!1.75e-10!14;UBERON:0000063!1.00e-09!97;UBERON:0000077!3.40e-08!130;UBERON:0001041!7.48e-08!98;UBERON:0000064!8.12e-07!219;UBERON:0004921!8.20e-07!129;UBERON:0004185!8.20e-07!129 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p8@ASPSCR1 | |short_description=p8@ASPSCR1 | ||
}} | }} |
Latest revision as of 10:33, 18 September 2015
Short description: | p8@ASPSCR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_ASPSCR1_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | -143bp_to_AK127311_5end |
EntrezGene: | ASPSCR1 |
HGNC: | 13825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 5.56e-26 | 4 |
bronchus cancer | 1.65e-15 | 7 |
bronchogenic carcinoma | 1.65e-15 | 7 |
lung carcinoma | 2.19e-12 | 9 |
gastrointestinal system cancer | 2.00e-08 | 14 |
lung cancer | 5.55e-08 | 15 |
respiratory system cancer | 1.45e-07 | 16 |