FFCP PHASE1:Hg19::chr12:46660320..46660343,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81539 | |EntrezGene=81539 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=13447 | |HGNC=13447 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_uc001rpa.2_5end | |association_with_transcript=-42bp_to_uc001rpa.2_5end | ||
|cluster_id=chr12:46660320..46660343,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_16_at_SLC38A1_5end | |description=CAGE_peak_16_at_SLC38A1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0001014;5.48e-10;2!CL:0001016;5.48e-10;2!CL:0002577;6.35e-07;3 | |ontology_enrichment_celltype_v019=CL:0001014;5.48e-10;2!CL:0001016;5.48e-10;2!CL:0002577;6.35e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,3.66e-10,2;CL:0001016,3.66e-10,2;CL:0002577,4.33e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.42e-12!57;UBERON:0005068!6.42e-12!57;UBERON:0006241!6.42e-12!57;UBERON:0007135!6.42e-12!57;UBERON:0000064!2.46e-10!219;UBERON:0001017!5.98e-10!82;UBERON:0003075!6.86e-10!86;UBERON:0007284!6.86e-10!86;UBERON:0005743!9.24e-10!86;UBERON:0002346!1.64e-09!90;UBERON:0002616!4.21e-09!59;UBERON:0000955!8.44e-09!69;UBERON:0006238!8.44e-09!69;UBERON:0000073!3.17e-08!94;UBERON:0001016!3.17e-08!94;UBERON:0007023!3.70e-08!115;UBERON:0001893!3.74e-08!34;UBERON:0002619!4.39e-08!22;UBERON:0002780!8.36e-08!41;UBERON:0001890!8.36e-08!41;UBERON:0006240!8.36e-08!41;UBERON:0002020!8.51e-08!34;UBERON:0003528!8.51e-08!34;UBERON:0002791!1.20e-07!33;UBERON:0003080!2.04e-07!42;UBERON:0001869!3.21e-07!32;UBERON:0001950!8.50e-07!20 | |ontology_enrichment_uberon=UBERON:0001049!6.42e-12!57;UBERON:0005068!6.42e-12!57;UBERON:0006241!6.42e-12!57;UBERON:0007135!6.42e-12!57;UBERON:0000064!2.46e-10!219;UBERON:0001017!5.98e-10!82;UBERON:0003075!6.86e-10!86;UBERON:0007284!6.86e-10!86;UBERON:0005743!9.24e-10!86;UBERON:0002346!1.64e-09!90;UBERON:0002616!4.21e-09!59;UBERON:0000955!8.44e-09!69;UBERON:0006238!8.44e-09!69;UBERON:0000073!3.17e-08!94;UBERON:0001016!3.17e-08!94;UBERON:0007023!3.70e-08!115;UBERON:0001893!3.74e-08!34;UBERON:0002619!4.39e-08!22;UBERON:0002780!8.36e-08!41;UBERON:0001890!8.36e-08!41;UBERON:0006240!8.36e-08!41;UBERON:0002020!8.51e-08!34;UBERON:0003528!8.51e-08!34;UBERON:0002791!1.20e-07!33;UBERON:0003080!2.04e-07!42;UBERON:0001869!3.21e-07!32;UBERON:0001950!8.50e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;1.83e-13;3!UBERON:0005290;1.83e-13;3!UBERON:0001987;6.49e-11;4!UBERON:0002298;5.84e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0001896;1.83e-13;3!UBERON:0005290;1.83e-13;3!UBERON:0001987;6.49e-11;4!UBERON:0002298;5.84e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,3.94e-14,3;UBERON:0005290,3.94e-14,3;UBERON:0010096,3.94e-14,3;UBERON:0001987,4.14e-11,4;UBERON:0004340,4.14e-11,4;UBERON:0005631,4.67e-08,14;UBERON:0000158,4.67e-08,14;UBERON:0002298,2.78e-07,6 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,0,0,0,0,1.52908960491121,0.791300934685361,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,1.06978768047132,0.57470412614962,1.33808328233255,0.393364276848904,0,0,0,0,0,0.154934401160603,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0.512321413058201,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0.569212969109448,0.587237189370939,0.764546456250458,0,1.12101712596307,0,0.393419540227666,1.17903228824749,0.616804496998528,0.167186495390678,0.651844533267181,0.946895611469467,0,0.222820913770347,0.883817722424512,0.886135578334485,0.270803863765016,0.512365278902701,0.260118695119756,0.164437904603676,0,0.579606171470105,0.296573126324121,0,0,0,0.383220493601921,0.34362744548263,0,0,0,0,0.451725357233318,0,0,0,0.821127996921047,1.00803371612366,0,0.289648807765598,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926864265692532,1.43418310374407,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0.132529768321485,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0.217879444092406,0.237270619111097,0.404493924480493,0,0,0,0,0.4115740113314,0,0,0,0,0.441463099414651,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0.234817388471643,0,0,0.380508304469197,0,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0.258543431515556,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0.336255431980582,0.591092280605782,0.862510299438069,0.513372145118994,0,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533637789017222,0,3.32870879020994,1.81434175997808,0,0,0.280660094433074,0.640695746278505,0,0,1.48418066444991,0,0,0,0,0,0,0,0.368323955743585,0,0,0.917870904715969,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,2.06082023295445,0,0,0,0,0,0.096670718292122,0,0,0,0.322260734604821,0,0,0.178064071293475,0,0,0.255225424989168,0.10115778085555,0,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,0,0,0.179872457583315,0.823611089208164,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0.286822704408103,0,0,0.354761064070598,0.422215270595328,0,0,0,0.0962221127255121,0,0,2.44773882019626,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0.445773537109913,0,0.23874448473769,5.3453642549875,0,0.994147647766298,0.422008249231538,0.333926115068718,0.16480387422676,0,0,0,0,0.20453736500431,2.09244169283818,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0.556608588971108,0,1.04171104434093,3.14855999986305,0,0,0,0.709163045303809,0,0,0,1.77148277162768,0,0,0.663475559587348,0.591095237907095,0.87754158861589,0,1.39423744278603,0.153900517007594,0.113942055847001,0.46112780877612,0.359030577639089,0.977826347298073,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,1.08194319871046,0,0,0.611030144933625,0.296521128680622,0.370691816839509,0.417687798021821,0.741412462787447,0,0,0,0,0.728341138602278,0,0,0.61214552326098,0.442306057399416,0,0.103688191397247,0,0.330991955875499,0,0,0.284609546029793,0.138674673013139,0.173559738335131,0.293977192243133,0.34823682632161,0.17472666824203,0,0.0967563312890851,0.146178634172371,0,0.0969890164884194,17.7394814649916,0,0.137041924646751,0,0.886351143382302,0.391102765469606,0,0,0.19980960958213,0.144090417154106,0,0,0,0.99402028452346,0.471388069233591,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0.687481272035051,0,0.399358000997982,0,0.89268582976749,5.64341168888501,0,0,0,0,0,0,0.254019996197353,0.795229689809303,1.49823746722733,0.160753148465019,0.137539436597234,0,3.59958226482401,1.5476039091159,0.607495566580247,0.670869375198532,0.157611414598396,0.0524545881349981,0,0,0.383830394638891,0,0.662091970365432,0.76280561296425,0,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0.387848869084652,0.26446520348538,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.500763722825999,1.72022758707021,1.66393577305278,1.98708489412427,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0.398095888698616,0,0,0,0,0.385239660814607,0.428883182749851,0.260994291965212,0,0,0,0,0,0.219284049578707,0.176689145945881,0.38582807654183,0.675769762612291,0.256241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|short_description=p16@SLC38A1 | |short_description=p16@SLC38A1 | ||
}} | }} |
Latest revision as of 10:39, 18 September 2015
Short description: | p16@SLC38A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SLC38A1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -42bp_to_uc001rpa.2_5end |
EntrezGene: | SLC38A1 |
HGNC: | 13447 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 3.66e-10 | 2 |
immature CD1a-positive Langerhans cell | 3.66e-10 | 2 |
placental epithelial cell | 4.33e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 3.94e-14 | 3 |
myelencephalon | 3.94e-14 | 3 |
future myelencephalon | 3.94e-14 | 3 |
placenta | 4.14e-11 | 4 |
allantois | 4.14e-11 | 4 |
extraembryonic membrane | 4.67e-08 | 14 |
membranous layer | 4.67e-08 | 14 |
brainstem | 2.78e-07 | 6 |