FFCP PHASE1:Hg19::chr1:167059763..167059776,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10223 | |EntrezGene=10223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4445 | |HGNC=4445 | ||
|TSSclassifier=strong | |||
|UniProt=Q99795,Q5VZP6 | |UniProt=Q99795,Q5VZP6 | ||
|association_with_transcript=91bp_to_ENST00000367868,NM_005814,uc001gea.1_5end | |association_with_transcript=91bp_to_ENST00000367868,NM_005814,uc001gea.1_5end | ||
|cluster_id=chr1:167059763..167059776,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_4_at_GPA33_5end | |description=CAGE_peak_4_at_GPA33_5end | ||
|id=chr1:167059763..167059776,- | |id=chr1:167059763..167059776,- | ||
|ontology_enrichment_celltype=CL:0000763!3.51e-07!112;CL:0000049!3.51e-07!112 | |ontology_enrichment_celltype=CL:0000763!3.51e-07!112;CL:0000049!3.51e-07!112 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;7.72e-21;1 | |||
|ontology_enrichment_disease=DOID:9119!9.74e-09!1;DOID:8692!4.45e-08!31 | |ontology_enrichment_disease=DOID:9119!9.74e-09!1;DOID:8692!4.45e-08!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!9.64e-25!11;UBERON:0000160!7.16e-21!27;UBERON:0005409!6.34e-16!35;UBERON:0004907!2.44e-14!5;UBERON:0001155!5.40e-14!9;UBERON:0001154!5.70e-09!1;UBERON:0001153!5.70e-09!1;UBERON:0001052!1.37e-08!4;UBERON:0002372!2.22e-08!1;UBERON:0001961!2.22e-08!1;UBERON:0001744!2.22e-08!1;UBERON:0001735!2.22e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.07e-88;17!UBERON:0005409;8.96e-69;22!UBERON:0000059;3.21e-64;11!UBERON:0004921;3.69e-41;33!UBERON:0002108;3.66e-36;4!UBERON:0004907;9.56e-36;5!UBERON:0001155;1.37e-35;9!UBERON:0001154;7.72e-21;1!UBERON:0001153;7.72e-21;1!UBERON:0009854;7.72e-21;1!UBERON:0001052;1.41e-20;4!UBERON:0001555;4.91e-16;54!UBERON:0001007;4.57e-12;81!UBERON:0002114;7.02e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.07e-88,17;UBERON:0000059,3.21e-64,11;UBERON:0005409,7.80e-61,25;UBERON:0002108,3.66e-36,4;UBERON:0004907,9.56e-36,5;UBERON:0001155,1.37e-35,9;UBERON:0001154,7.72e-21,1;UBERON:0001153,7.72e-21,1;UBERON:0001045,7.72e-21,1;UBERON:0001052,1.41e-20,4;UBERON:0004921,4.49e-13,118;UBERON:0001007,1.43e-10,145;UBERON:0001555,1.43e-10,145;UBERON:0007026,1.43e-10,145;UBERON:0001046,6.05e-10,19;UBERON:0004119,1.54e-09,160;UBERON:0000925,1.54e-09,160;UBERON:0006595,1.54e-09,160;UBERON:0002114,6.78e-08,2 | |||
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|short_description=p4@GPA33 | |short_description=p4@GPA33 | ||
}} | }} |
Latest revision as of 10:49, 18 September 2015
Short description: | p4@GPA33 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GPA33_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 91bp_to_ENST00000367868, NM_005814, uc001gea.1_5end |
EntrezGene: | GPA33 |
HGNC: | 4445 |
UniProt: | Q99795Q5VZP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 7.07e-88 | 17 |
large intestine | 3.21e-64 | 11 |
gastrointestinal system | 7.80e-61 | 25 |
small intestine | 3.66e-36 | 4 |
lower digestive tract | 9.56e-36 | 5 |
colon | 1.37e-35 | 9 |
vermiform appendix | 7.72e-21 | 1 |
caecum | 7.72e-21 | 1 |
midgut | 7.72e-21 | 1 |
rectum | 1.41e-20 | 4 |
subdivision of digestive tract | 4.49e-13 | 118 |
digestive system | 1.43e-10 | 145 |
digestive tract | 1.43e-10 | 145 |
primitive gut | 1.43e-10 | 145 |
hindgut | 6.05e-10 | 19 |
endoderm-derived structure | 1.54e-09 | 160 |
endoderm | 1.54e-09 | 160 |
presumptive endoderm | 1.54e-09 | 160 |
duodenum | 6.78e-08 | 2 |