FFCP PHASE1:Hg19::chr3:47018219..47018255,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151903 | |EntrezGene=151903 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28332 | |HGNC=28332 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460035,ENST00000488069,ENST00000494655_5end | |association_with_transcript=0bp_to_ENST00000460035,ENST00000488069,ENST00000494655_5end | ||
|cluster_id=chr3:47018219..47018255,- | |||
|description=CAGE_peak_1_at_CCDC12_5end | |description=CAGE_peak_1_at_CCDC12_5end | ||
|id=chr3:47018219..47018255,- | |id=chr3:47018219..47018255,- | ||
|ontology_enrichment_celltype=CL:0000838!1.87e-14!52;CL:0000542!3.81e-14!53;CL:0000051!3.81e-14!53;CL:0000037!7.35e-14!172;CL:0000566!7.35e-14!172;CL:0000988!7.39e-13!182;CL:0002032!9.08e-12!165;CL:0000837!9.08e-12!165;CL:0000738!8.76e-09!140;CL:0002031!1.61e-08!124;CL:0000791!2.52e-08!18;CL:0000789!2.52e-08!18;CL:0002420!2.52e-08!18;CL:0002419!2.52e-08!18;CL:0000790!2.52e-08!18;CL:0002087!1.57e-07!119;CL:0000945!2.29e-07!24;CL:0000826!2.29e-07!24;CL:0000084!7.15e-07!25;CL:0000827!7.15e-07!25;CL:0000236!8.84e-07!14 | |ontology_enrichment_celltype=CL:0000838!1.87e-14!52;CL:0000542!3.81e-14!53;CL:0000051!3.81e-14!53;CL:0000037!7.35e-14!172;CL:0000566!7.35e-14!172;CL:0000988!7.39e-13!182;CL:0002032!9.08e-12!165;CL:0000837!9.08e-12!165;CL:0000738!8.76e-09!140;CL:0002031!1.61e-08!124;CL:0000791!2.52e-08!18;CL:0000789!2.52e-08!18;CL:0002420!2.52e-08!18;CL:0002419!2.52e-08!18;CL:0000790!2.52e-08!18;CL:0002087!1.57e-07!119;CL:0000945!2.29e-07!24;CL:0000826!2.29e-07!24;CL:0000084!7.15e-07!25;CL:0000827!7.15e-07!25;CL:0000236!8.84e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000542;2.64e-09;53!CL:0000791;2.15e-08;18!CL:0000789;2.15e-08;18!CL:0002419;2.15e-08;18!CL:0000236;2.70e-08;13!CL:0000945;1.47e-07;24!CL:0000084;6.26e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,1.87e-14,52;CL:0000542,3.81e-14,53;CL:0000051,3.81e-14,53;CL:0000037,1.56e-13,168;CL:0000988,1.92e-12,177;CL:0002032,1.87e-11,161;CL:0000837,1.87e-11,161;CL:0000738,1.70e-08,136;CL:0000791,2.52e-08,18;CL:0000789,2.52e-08,18;CL:0002420,2.52e-08,18;CL:0002419,2.52e-08,18;CL:0000790,2.52e-08,18;CL:0002031,3.09e-08,120;CL:0000945,2.29e-07,24;CL:0000826,2.29e-07,24;CL:0002087,2.95e-07,115;CL:0000084,7.15e-07,25;CL:0000827,7.15e-07,25;CL:0000236,8.84e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000051;2.64e-09;53!CL:0000790;2.15e-08;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CCDC12 | |short_description=p1@CCDC12 | ||
}} | }} |
Latest revision as of 11:59, 18 September 2015
Short description: | p1@CCDC12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CCDC12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000460035, ENST00000488069, ENST00000494655_5end |
EntrezGene: | CCDC12 |
HGNC: | 28332 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 1.87e-14 | 52 |
lymphocyte | 3.81e-14 | 53 |
common lymphoid progenitor | 3.81e-14 | 53 |
hematopoietic stem cell | 1.56e-13 | 168 |
hematopoietic cell | 1.92e-12 | 177 |
hematopoietic oligopotent progenitor cell | 1.87e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.87e-11 | 161 |
leukocyte | 1.70e-08 | 136 |
mature alpha-beta T cell | 2.52e-08 | 18 |
alpha-beta T cell | 2.52e-08 | 18 |
immature T cell | 2.52e-08 | 18 |
mature T cell | 2.52e-08 | 18 |
immature alpha-beta T cell | 2.52e-08 | 18 |
hematopoietic lineage restricted progenitor cell | 3.09e-08 | 120 |
lymphocyte of B lineage | 2.29e-07 | 24 |
pro-B cell | 2.29e-07 | 24 |
nongranular leukocyte | 2.95e-07 | 115 |
T cell | 7.15e-07 | 25 |
pro-T cell | 7.15e-07 | 25 |
B cell | 8.84e-07 | 14 |