FFCP PHASE1:Hg19::chr15:63449025..63449064,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:63449025..63449064,-
|short_description=p3@RPS27L
|description=CAGE_peak_3_at_RPS27L_5end
|association_with_transcript=-52bp_to_ENST00000462430_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51065 | |EntrezGene=51065 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18476 | |HGNC=18476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-52bp_to_ENST00000462430_5end | |||
|cluster_id=chr15:63449025..63449064,- | |||
|coexpression_cluster_id=C231 | |||
|description=CAGE_peak_3_at_RPS27L_5end | |||
|id=chr15:63449025..63449064,- | |||
|ontology_enrichment_celltype=CL:0000048!1.23e-15!430;CL:0000723!1.09e-14!436;CL:0000034!2.19e-13!444;CL:0000766!5.11e-13!76;CL:0000839!6.40e-13!70;CL:0000557!1.01e-12!71;CL:0000860!4.03e-12!45;CL:0002194!5.78e-12!63;CL:0000576!5.78e-12!63;CL:0000040!5.78e-12!63;CL:0000559!5.78e-12!63;CL:0002009!7.30e-12!65;CL:0000144!8.87e-12!625;CL:0002057!1.52e-11!42;CL:0000548!3.17e-11!679;CL:0000004!3.17e-11!679;CL:0000255!3.17e-11!679;CL:0000012!1.01e-10!682;CL:0002371!3.73e-10!591;CL:0002320!1.97e-09!365;CL:0000134!1.99e-09!358;CL:0000219!1.47e-08!390;CL:0000003!4.20e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.46e-09;33!CL:0002057;3.46e-09;33!CL:0000473;7.78e-09;39!CL:0000234;7.78e-09;39!CL:0000077;2.25e-07;19!CL:0002579;8.34e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.73e-11,48;CL:0000234,2.73e-11,48;CL:0000860,1.35e-09,42;CL:0002057,1.35e-09,42;CL:0000766,7.65e-09,72;CL:0000839,2.59e-08,66;CL:0000557,4.14e-08,67;CL:0002194,5.57e-08,59;CL:0000576,5.57e-08,59;CL:0000040,5.57e-08,59;CL:0000559,5.57e-08,59;CL:0002009,1.46e-07,61;CL:0000077,2.45e-07,19;CL:0000048,3.80e-07,427;CL:0000723,8.24e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-07;42 | |||
|ontology_enrichment_disease=DOID:2394!3.38e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.28e-07;14!DOID:0060084;5.34e-07;3!DOID:127;5.34e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.68e-08,14;DOID:0060084,5.39e-07,3;DOID:127,5.39e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!7.03e-15!167;UBERON:0002371!4.92e-12!80;UBERON:0001474!5.33e-11!86;UBERON:0004765!2.59e-09!101;UBERON:0001434!2.59e-09!101;UBERON:0002390!6.17e-09!102;UBERON:0003061!6.17e-09!102;UBERON:0002384!9.02e-09!375;UBERON:0002193!3.69e-08!112;UBERON:0003081!1.12e-07!216;UBERON:0000926!3.92e-07!448;UBERON:0004120!3.92e-07!448;UBERON:0006603!3.92e-07!448;UBERON:0002405!5.45e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;2.79e-08;6!UBERON:0002358;2.79e-08;6!UBERON:0003684;2.79e-08;6!UBERON:0001178;2.79e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,4.38e-11,315;UBERON:0004120,4.38e-11,315;UBERON:0006603,4.38e-11,315;UBERON:0002371,3.37e-09,76;UBERON:0002390,3.81e-08,98;UBERON:0003061,3.81e-08,98;UBERON:0003688,4.38e-08,6;UBERON:0002358,4.38e-08,6;UBERON:0003684,4.38e-08,6;UBERON:0001178,4.38e-08,6;UBERON:0001474,4.51e-08,82;UBERON:0003081,1.01e-07,203;UBERON:0002204,5.88e-07,167;UBERON:0004765,7.97e-07,90;UBERON:0002193,9.08e-07,108 | |||
|phase1_expression=2.90685406832891,0.642301571672949,2.53717927372748,0,1.34088328328186,2.61701557230111,0,0,0.522371256399677,0.245733936501509,0,0.436882744260345,0,0,0.331397375727916,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0.286235987131057,0,0.251085279189606,0.229240217243854,0.410502947249729,0.236132343941038,0.786728553697808,1.53531759238885,1.08371286321253,0,0,0,0.0774672005803016,0.142169232487422,0,1.66198622559563,0.802177789880567,0.217010870715852,0.447830948479849,0.647787332037959,0.515151135268373,0.290796477559129,0.755751887377619,0.970336244751265,0.232429036905685,1.6446715520873,0.929119112685311,1.43846196161075,2.81776777182011,3.07426898855161,0.689491361473237,0.645484683583826,0,0.564727018627814,1.36453075028923,0.898893937780338,0.306083892370903,1.28371610830437,0.639337125799041,1.31940520074686,1.39624560335142,1.27867425159808,1.45104619314292,0,0.622822248995575,1.25624332628372,1.0429658368404,1.3031330682307,1.81619850790011,1.47311054395026,2.84816148696796,0.211255286311942,0.637812899895131,1.25795187305026,0,0,0,0.285012743741249,0.39783335439818,0,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,2.43806866313962,1.34140171940727,0.12786256184353,1.0843174571537,0,0.434539556882471,0,0,0.283604451492204,0.221729397462564,0.087834785693126,1.83370705696798,0,0,0.649094787309367,0.174129737299267,0.531831842075461,0,0.571994910780128,0.371457501329565,0.198762407366705,0.860234595106124,0.347140501607594,0,0,0,0.208994966536811,0.258416759169329,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0,1.53316637465883,0,0,0,0,0,0,0.759783069987479,4.63432132846266,0.860509862246441,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.538842688278752,0.653847612453835,0,0.576175924479999,0,0,0,0.149448680551801,0.117434498643765,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0.438977620880838,0.30648779579902,0,1.02088964844019,0.717558542755448,0.427114777637135,0.635795703478686,0.300091096084402,0.824420233907511,0.515281080091258,0.37223371266318,0,0.292311015483596,0,0.460249493211497,0.323292113637624,0.355009592516614,0.906768884048762,0.508681776931463,0.193260853163297,0.818238361772504,0.286804595389004,0.121973706129595,0,0,0,0,0,0,0.643240938192885,0,0.464367928031979,0,0.946454400318751,0.168584690078102,0.482022059766964,0.992645754591546,0.653638332277218,0.474541238222193,1.75280700608214,1.17732879075208,0.38474715694639,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.651616610620649,0,0,0.34779121492523,0.70445216541493,0.577465791044295,0,0.190254152234598,0,0,1.47730203652438,0.702012795417713,0,0,0.335964256397719,0,0.0895585227028483,0,0,0.492663237895943,0.352193736052904,1.4512968087854,0.144119953416961,1.2624243342638,0.253991577168676,1.14596527667483,0,1.71072446022705,0.102827492703324,0.901029173531752,0,0,0.43596006883328,0.1466765716419,2.19761916788222,0,0,2.39344304926383,1.04007436911366,0,0,0,0.285955987316295,0.542621605391443,0,0,0.355391948742546,0,17.7849232465156,15.6876022548053,7.39800134747222,2.43247561282381,1.00451418286425,0,0.239624855491583,0,0,1.15825045334063,0.821905290201534,0.716243852959582,0,0.197030760201927,0.431255149719035,0.128343036279748,0.508189248444927,1.30139853857622,0,0,0,0.749007023947182,0,0,0,0.500170521059677,0.271265023699736,0.831883446123229,0.713715955188647,0.315404830067869,0.234282829985426,0,2.27407504055985,1.03473071292505,0,0.184369168541703,0.173767228936166,0.195801157462741,0,0,0.647142602455851,0,0,0,0,3.47350930946288,1.07423381301644,0.280660094433074,3.07533958213682,1.02341449813341,2.73451665944133,0,0.308419387605311,0.710246901252508,0.410635780069046,0,0.464841513839837,0,0.200506470303285,0.0920809889358963,1.03333003348146,0.910455840033585,1.18011973463482,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0.261435451024901,0.256450125116389,0,0.325378394664303,0.206082023295445,0.0915694648183434,0.330037999682352,0,0,0,0,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0.340906509664404,1.60257664164127,0.165284915360978,0,0,0,1.85938219718914,1.25924938732256,0,0.308033580176089,2.12922412126809,0,0.37064843820784,1.5743737541619,0.372158369359667,2.53103539774981,0.953150969619124,0.511795582622668,0.42793898803392,0.318203247925937,0,1.2591072030832,0.54907405947211,0.589062011728432,1.61745985258653,1.58510321173008,0,0.48763373908959,0.974853958525138,0,0.409499734223957,0.282810863907425,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0.143411352204052,0.294747123039363,0.35667105148125,0.354761064070598,0.211107635297664,0.329294892959902,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0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| ||
|short_description=p3@RPS27L | |||
}} | }} |
Latest revision as of 12:13, 18 September 2015
Short description: | p3@RPS27L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RPS27L_5end |
Coexpression cluster: | C231_Mesothelial_mesenchymal_mesothelioma_Fibroblast_Preadipocyte_leiomyoma_mycosis |
Association with transcript: | -52bp_to_ENST00000462430_5end |
EntrezGene: | RPS27L |
HGNC: | 18476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.73e-11 | 48 |
phagocyte | 2.73e-11 | 48 |
classical monocyte | 1.35e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-09 | 42 |
myeloid leukocyte | 7.65e-09 | 72 |
myeloid lineage restricted progenitor cell | 2.59e-08 | 66 |
granulocyte monocyte progenitor cell | 4.14e-08 | 67 |
monopoietic cell | 5.57e-08 | 59 |
monocyte | 5.57e-08 | 59 |
monoblast | 5.57e-08 | 59 |
promonocyte | 5.57e-08 | 59 |
macrophage dendritic cell progenitor | 1.46e-07 | 61 |
mesothelial cell | 2.45e-07 | 19 |
multi fate stem cell | 3.80e-07 | 427 |
somatic stem cell | 8.24e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 4.38e-11 | 315 |
mesoderm-derived structure | 4.38e-11 | 315 |
presumptive mesoderm | 4.38e-11 | 315 |
bone marrow | 3.37e-09 | 76 |
hematopoietic system | 3.81e-08 | 98 |
blood island | 3.81e-08 | 98 |
omentum | 4.38e-08 | 6 |
peritoneum | 4.38e-08 | 6 |
abdominal cavity | 4.38e-08 | 6 |
visceral peritoneum | 4.38e-08 | 6 |
bone element | 4.51e-08 | 82 |
lateral plate mesoderm | 1.01e-07 | 203 |
musculoskeletal system | 5.88e-07 | 167 |
skeletal element | 7.97e-07 | 90 |
hemolymphoid system | 9.08e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.68e-08 | 14 |
cell type benign neoplasm | 5.39e-07 | 3 |
leiomyoma | 5.39e-07 | 3 |