FFCP PHASE1:Hg19::chr12:47473642..47473653,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=347902 | |EntrezGene=347902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24073 | |HGNC=24073 | ||
|TSSclassifier=strong | |||
|UniProt=Q86SJ2 | |UniProt=Q86SJ2 | ||
|association_with_transcript=0bp_to_ENST00000266581_5end | |association_with_transcript=0bp_to_ENST00000266581_5end | ||
|cluster_id=chr12:47473642..47473653,- | |||
|coexpression_cluster_id=C893 | |coexpression_cluster_id=C893 | ||
|description=CAGE_peak_7_at_AMIGO2_5end | |description=CAGE_peak_7_at_AMIGO2_5end | ||
|id=chr12:47473642..47473653,- | |id=chr12:47473642..47473653,- | ||
|ontology_enrichment_celltype=CL:0000066!8.56e-10!254;CL:0002076!4.80e-09!43;CL:0000223!6.34e-07!59 | |ontology_enrichment_celltype=CL:0000066!8.56e-10!254;CL:0002076!4.80e-09!43;CL:0000223!6.34e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:1000507;4.32e-10;10!CL:1000494;4.32e-10;10!CL:1000449;3.58e-08;15!CL:1000497;5.01e-07;17!CL:0002518;5.01e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.27e-10,10;CL:1000494,4.27e-10,10;CL:1000449,3.84e-08,15;CL:0000066,2.24e-07,253;CL:1000497,5.32e-07,17;CL:0002518,5.32e-07,17 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:120!5.65e-10!27;DOID:193!1.22e-09!29;DOID:2394!7.87e-08!14 | |ontology_enrichment_disease=DOID:120!5.65e-10!27;DOID:193!1.22e-09!29;DOID:2394!7.87e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;1.25e-13;14!DOID:120;1.35e-10;27!DOID:193;1.22e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.91e-14,14;DOID:120,9.95e-11,27;DOID:193,9.21e-10,29 | |||
|ontology_enrichment_uberon=UBERON:0000464!4.19e-09!104;UBERON:0000475!1.27e-08!365;UBERON:0003886!1.62e-08!63;UBERON:0000466!2.20e-08!126;UBERON:0002100!6.31e-07!216;UBERON:0002553!7.40e-07!70 | |ontology_enrichment_uberon=UBERON:0000464!4.19e-09!104;UBERON:0000475!1.27e-08!365;UBERON:0003886!1.62e-08!63;UBERON:0000466!2.20e-08!126;UBERON:0002100!6.31e-07!216;UBERON:0002553!7.40e-07!70 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;4.32e-10;10!UBERON:0009773;4.32e-10;10!UBERON:0001231;4.32e-10;10!UBERON:0004810;4.32e-10;10!UBERON:0006554;1.06e-09;30!UBERON:0001008;1.06e-09;30!UBERON:0006555;3.58e-08;15!UBERON:0004819;3.58e-08;15!UBERON:0001285;3.58e-08;15!UBERON:0007684;3.58e-08;15!UBERON:0000365;6.05e-08;5!UBERON:0002118;4.13e-07;5!UBERON:0000992;4.45e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003886,2.37e-10,54;UBERON:0004810,4.27e-10,10;UBERON:0002323,7.74e-09,46;UBERON:0002553,1.41e-08,61;UBERON:0004211,3.84e-08,15;UBERON:0009773,3.84e-08,15;UBERON:0001231,3.84e-08,15;UBERON:0001285,3.84e-08,15;UBERON:0007684,3.84e-08,15;UBERON:0004208,3.84e-08,15;UBERON:0004458,4.84e-08,49;UBERON:0000365,7.12e-08,5;UBERON:0006555,1.55e-07,16;UBERON:0004819,1.55e-07,16;UBERON:0000992,3.79e-07,13;UBERON:0002118,3.93e-07,5;UBERON:0006554,6.16e-07,47 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0.872338524100369,2.53299878168311,0,0,0.982935746006035,0.697801167972428,0,0,0,0,0,1.20538905604795,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0,0.136874425072884,0.251085279189606,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0,0,0,0,0.127986611154418,1.24930726552346,0.236777252044017,0,0.201606743224732,0.534880391567015,0,0,0.670700859703636,0.12786256184353,0,0,0,1.5905718941022,0.486634870302636,0.0945348171640679,0.886917589850256,0.263504357079378,0.0654895377488563,0.364295288292542,0,0,0,0,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0.872188104285069,0,0,0.264818361626438,0,0,0,0,4.9333509683432,0.311211035399766,0.134710672069688,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0.438977620880838,0.919463387397059,0,0.907457465280168,0.179389635688862,0.213557388818567,0,0.300091096084402,0.206105058476878,0.515281080091258,2.97786970130544,0,0.68205903612839,0.252433774244115,0.460249493211497,0,0.710019185033229,1.0075209822764,0.67824236924195,0.773043412653187,3.54569956768085,1.72082757233402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.658501712451753,2.24803506515239,0.402115889646523,1.01847289674383,0,0,0,0.115930404975077,0.821860859650752,0,0,0,0,1.71697232418975,0,0,0,0.93733833986777,2.68771405118175,1.55952606966625,0.985143749731331,0.290633938513962,1.53353071666084,0.492663237895943,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,2.1798003441664,0.1466765716419,9.95392211334889,0,0,2.6593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0.791951872933429,0.301439377059586,1.74306691720059,2.0994328148232,0,0,0,5.03212196532324,1.14861935834114,0,0.144781306667579,0.205476322550383,0.895304816199478,0,0.197030760201927,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0.207970861530807,0.356857977594324,0,0.234282829985426,0.300946099727719,0,0,1.99267679560631,2.76553752812555,0,0,0.343143423810856,0.206768026122887,0.215714200818617,0.106727557803444,0,0,0,0,0.306923946576125,0.280660094433074,0.256278298511402,0,2.2519548960105,0,0,0,0,0,0.116210378459959,0,3.00759705454927,0.0920809889358963,0,0.182091168006717,0.131124414959424,4.51199612907412,5.16002758599579,0.784349769176855,1.46139224653261,2.95544560900052,0,0,2.15915916102139,0,3.25135725052623,4.51520796469368,0,0,2.0148727924996,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0,1.72279661398852,1.30012049207304,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0.495854746082934,3.0750410778417,0.638063562472921,0.10115778085555,0,0.31481234683064,0,0.616067160352178,0,0,0.55597265731176,2.14687330112987,0.744316738719335,0.316379424718726,0.190630193923825,0,0,0,0,0.719489830333259,0,0.235624804691373,0.404364963146632,0,0,0,1.46228093778771,1.05650146756755,1.50149902548784,0,0,0.551365343546124,0.66343897524122,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0.845086807596724,1.00387946542836,0.392996164052485,1.07001315444375,0,0,0,0,0,0.577332676353072,0.670302275535787,2.17781969722645,0,8.17960208075337,0,3.10401107475673,14.9320210134524,0,0,0,0,0.411362273086194,0,0,0,3.95249063171651,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333926115068718,0,0,0.398495976502139,0,0,1.63629892003448,0,0.311039587661807,3.77447074818773,0,0,0.295930216910801,0,1.11136990144637,0,0,0,1.30213880542617,0.174919999992391,0,1.137934482855,0.254253650292766,0.472775363535873,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.230850775511391,0.683652335082007,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.68798451622422,4.08082020397869,0,0,0,0.0884575645033392,1.22206028986725,0,0,0,0.067401132980677,0.802577647298789,0,0,0,0.242780379534093,0,0,0.61214552326098,0,0,0,2.65861549082874,1.323967823502,2.5114633472578,2.38944859545918,6.83062910471503,0.832048038078832,0.694238953340524,0.881931576729399,0.435296032902013,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.677942222341597,6.02984468445704,0.596143835108969,0,0.195551382734803,2.48492342779755,0,0.39961921916426,0.432271251462318,0,0,0.288109595976299,1.36677789121976,0,0.951329442515298,0.418411385249333,0.713987523454252,0.288950589901519,0,0,0,0.429765441419957,0,0,0.916641696046735,0,0,0,0,0.0671834724867263,9.36779697210249,0,0,0,0,0.984274815147488,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,1.34340638123612,0,0,0,0,0,0,2.39460383124975,0.656740165994712,1.02232813071253,0.113312091520126,0,0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| ||
|short_description=p7@AMIGO2 | |short_description=p7@AMIGO2 | ||
}} | }} |
Latest revision as of 12:13, 18 September 2015
Short description: | p7@AMIGO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_AMIGO2_5end |
Coexpression cluster: | C893_osteoclastoma_Urothelial_tubular_nonsmall_Mesenchymal_Renal_hepatic |
Association with transcript: | 0bp_to_ENST00000266581_5end |
EntrezGene: | AMIGO2 |
HGNC: | 24073 |
UniProt: | Q86SJ2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.27e-10 | 10 |
nephron tubule epithelial cell | 4.27e-10 | 10 |
epithelial cell of nephron | 3.84e-08 | 15 |
epithelial cell | 2.24e-07 | 253 |
kidney cell | 5.32e-07 | 17 |
kidney epithelial cell | 5.32e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
body cavity precursor | 2.37e-10 | 54 |
nephron tubule epithelium | 4.27e-10 | 10 |
body cavity | 7.74e-09 | 46 |
anatomical cavity | 1.41e-08 | 61 |
nephron epithelium | 3.84e-08 | 15 |
renal tubule | 3.84e-08 | 15 |
nephron tubule | 3.84e-08 | 15 |
nephron | 3.84e-08 | 15 |
uriniferous tubule | 3.84e-08 | 15 |
nephrogenic mesenchyme | 3.84e-08 | 15 |
body cavity or lining | 4.84e-08 | 49 |
urothelium | 7.12e-08 | 5 |
excretory tube | 1.55e-07 | 16 |
kidney epithelium | 1.55e-07 | 16 |
female gonad | 3.79e-07 | 13 |
right ovary | 3.93e-07 | 5 |
urinary system structure | 6.16e-07 | 47 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.91e-14 | 14 |
female reproductive organ cancer | 9.95e-11 | 27 |
reproductive organ cancer | 9.21e-10 | 29 |