FFCP PHASE1:Hg19::chr14:102551739..102551773,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=3320 | |EntrezGene=3320 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=5253 | |HGNC=5253 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=270bp_to_ENST00000555662_5end | |association_with_transcript=270bp_to_ENST00000555662_5end | ||
|cluster_id=chr14:102551739..102551773,- | |||
|description=CAGE_peak_3_at_HSP90AA1_5end | |description=CAGE_peak_3_at_HSP90AA1_5end | ||
|id=chr14:102551739..102551773,- | |id=chr14:102551739..102551773,- |
Latest revision as of 13:14, 18 September 2015
Short description: | p3@HSP90AA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HSP90AA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 270bp_to_ENST00000555662_5end |
EntrezGene: | HSP90AA1 |
HGNC: | 5253 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@HSP90AA1 |
---|
0
20
40
60
80
100
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 6.34e-08 | 56 |
neural rod | 6.34e-08 | 56 |
future spinal cord | 6.34e-08 | 56 |
neural keel | 6.34e-08 | 56 |
regional part of forebrain | 1.42e-07 | 41 |
forebrain | 1.42e-07 | 41 |
anterior neural tube | 1.42e-07 | 41 |
future forebrain | 1.42e-07 | 41 |
brain grey matter | 2.39e-07 | 34 |
gray matter | 2.39e-07 | 34 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.40e-19 | 239 |
cancer | 1.40e-18 | 235 |
cell type cancer | 8.51e-10 | 143 |
carcinoma | 3.45e-09 | 106 |
organ system cancer | 4.09e-07 | 137 |
Showing 1 to 5 of 5 entries