FFCP PHASE1:Hg19::chr4:74486109..74486166,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=166824 | |EntrezGene=166824 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20796 | |HGNC=20796 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZTQ3 | |UniProt=Q6ZTQ3 | ||
|association_with_transcript=0bp_to_ENST00000395777,ENST00000512591,NM_177532,uc003hhc.1,uc010iik.1_5end | |association_with_transcript=0bp_to_ENST00000395777,ENST00000512591,NM_177532,uc003hhc.1,uc010iik.1_5end | ||
|cluster_id=chr4:74486109..74486166,- | |||
|coexpression_cluster_id=C1523 | |||
|description=CAGE_peak_1_at_RASSF6_5end | |description=CAGE_peak_1_at_RASSF6_5end | ||
|id=chr4:74486109..74486166,- | |id=chr4:74486109..74486166,- | ||
|ontology_enrichment_celltype=CL:0000066!2.40e-16!254;CL:0002076!2.64e-16!43;CL:0000223!8.56e-15!59;CL:0000945!7.92e-10!24;CL:0000826!7.92e-10!24;CL:0002251!8.20e-08!21;CL:0002159!9.51e-07!13 | |ontology_enrichment_celltype=CL:0000066!2.40e-16!254;CL:0002076!2.64e-16!43;CL:0000223!8.56e-15!59;CL:0000945!7.92e-10!24;CL:0000826!7.92e-10!24;CL:0002251!8.20e-08!21;CL:0002159!9.51e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002076;6.24e-13;42!CL:0000945;1.08e-12;24!CL:0002159;2.63e-08;14!CL:0002251;1.10e-07;20!CL:0000236;5.44e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.75e-16,253;CL:0002076,1.43e-14,42;CL:0000945,1.02e-12,24;CL:0000826,1.02e-12,24;CL:0000223,5.68e-12,58;CL:0002159,2.54e-08,14;CL:0000236,1.14e-07,14;CL:0002251,1.15e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!1.14e-10!106;DOID:1749!1.04e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.94e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.34e-10,14;DOID:305,6.93e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!5.64e-18!169;UBERON:0000925!5.64e-18!169;UBERON:0006595!5.64e-18!169;UBERON:0001007!7.09e-15!155;UBERON:0001555!7.09e-15!155;UBERON:0007026!7.09e-15!155;UBERON:0004921!4.41e-13!129;UBERON:0004185!4.41e-13!129;UBERON:0001004!8.51e-10!72;UBERON:0000077!1.84e-09!130;UBERON:0005911!5.34e-09!82;UBERON:0000161!8.95e-09!35;UBERON:0001008!1.98e-08!45;UBERON:0006554!4.46e-08!44;UBERON:0005177!1.05e-07!107;UBERON:0000464!1.33e-07!104;UBERON:0000466!2.10e-07!126;UBERON:0001041!4.21e-07!98;UBERON:0000166!4.70e-07!21;UBERON:0005409!6.02e-07!35;UBERON:0005153!9.67e-07!37 | |ontology_enrichment_uberon=UBERON:0004119!5.64e-18!169;UBERON:0000925!5.64e-18!169;UBERON:0006595!5.64e-18!169;UBERON:0001007!7.09e-15!155;UBERON:0001555!7.09e-15!155;UBERON:0007026!7.09e-15!155;UBERON:0004921!4.41e-13!129;UBERON:0004185!4.41e-13!129;UBERON:0001004!8.51e-10!72;UBERON:0000077!1.84e-09!130;UBERON:0005911!5.34e-09!82;UBERON:0000161!8.95e-09!35;UBERON:0001008!1.98e-08!45;UBERON:0006554!4.46e-08!44;UBERON:0005177!1.05e-07!107;UBERON:0000464!1.33e-07!104;UBERON:0000466!2.10e-07!126;UBERON:0001041!4.21e-07!98;UBERON:0000166!4.70e-07!21;UBERON:0005409!6.02e-07!35;UBERON:0005153!9.67e-07!37 | ||
|ontology_enrichment_uberon_v019=UBERON:0004921;8.96e-10;33!UBERON:0005409;4.18e-07;22!UBERON:0006554;5.38e-07;30!UBERON:0001008;5.38e-07;30!UBERON:0000160;7.31e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.07e-17,160;UBERON:0000925,1.07e-17,160;UBERON:0006595,1.07e-17,160;UBERON:0001007,1.13e-13,145;UBERON:0001555,1.13e-13,145;UBERON:0007026,1.13e-13,145;UBERON:0004921,2.13e-11,118;UBERON:0001004,9.66e-10,74;UBERON:0005911,1.50e-08,82;UBERON:0001008,1.62e-08,48;UBERON:0006554,4.42e-08,47;UBERON:0000153,8.09e-08,62;UBERON:0007811,8.09e-08,62;UBERON:0005177,2.40e-07,101;UBERON:0005409,4.36e-07,25;UBERON:0000161,6.35e-07,36;UBERON:0000160,6.45e-07,17 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2327706449488,8.7847630711442,10.547244696033,0,0,0,8.27479102031034,1.8072355126695,1.84877005083394,65.3048500891943,57.4363699249183,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,2.73069305631066,0.889509253863555,5.12076267079809,4.00395987036012,3.4485146397269,2.64417949113945,4.77026877267682,1.70763890732835,0,8.02773779062981,1.32171328579026,0.560508562981536,0,0.196709770113833,0.786021525498329,0.411202997999018,0,0.32592226663359,0,0,0,0.294605907474837,0.221533894583621,0.270803863765016,0.25618263945135,0,0,0,0,0,0,0,0,0,0.68725489096526,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03988298880475,0.886917589850256,0.351339142772504,4.58426764241994,2.91436230634034,2.96627554227544,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48875241714027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8226077771446,5.72766853240753,23.2311722265093,0.243947412259191,0,1.85910308591229,0.621966330092223,1.7662459561294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,5.53447973444011,3.43135620597051,11.8530308241316,3.37205259772859,3.11639814476056,2.03694579348765,0,0,0,1.15930404975077,0.117408694235822,0,0,0,0,0,0,0.234004265139238,0,11.2480600784132,12.0947132303179,12.47620855733,44.868819874127,20.9256435730053,2.30029607499127,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,3.02148623979056,29.2739446642796,10.5893137276281,0,0,0,4.96319574198153,9.08780977832094,0.784349769176855,1.46139224653261,9.81630148703744,0,0,0,0,0,0.501689773854853,2.80363900349542,2.49322802678617,0.895499018888713,0,0,1.79515087581472,4.59220503979588,3.57916234130733,6.59462474545423,0,0,4.01985876597321,3.25030123018261,0,0,0,0,0,0,0,0,0,32.3958434107517,22.8706180164476,19.7799704366605,11.3296714558216,0,0,0,0,0,0,0,0,0.372158369359667,0,0.953150969619124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.8730987379829,0,4.3556393944529,7.43736026136555,6.88808596273968,5.05414427002877,2.21715076768338,23.4317868211099,0,0,0,0.238231775457789,0.411362273086194,1.29694662238543,0.540031437238115,0,0,0,11.2718499351275,29.3569016698636,0,1.13826949357463,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6670108032685,0,0,0,0,0.71623345421307,0.296964680832639,0.307160702099232,0,0,0,0,0,1.39473591775749,17.9584545095246,52.1500788058351,0,52.5572119318767,0,1.52776196950456,20.2293927383438,0,2.66337195219721,0,0,0,0.185536196323703,0,0,0,0,10.3552037939805,0.762760950878299,0.472775363535873,0,0,0,0,0,0,0,0,0.438770794307945,0,8.78369588955201,1.84680620409113,0,0.23056390438806,0.897576444097721,0,2.23300811812344,0.915975934018623,2.13213910407454,0,0,0,0,0,0,0,0,2.10998064528027,6.52931232636591,4.38194521445217,0,8.95735737970654,13.7993800625209,34.217688116283,0,0,0,0.539209063845416,0,0,81.5572907794027,1.36965233252463,0,3.15667522279512,24.1981432097328,0,0.758238955541855,1.05226393590145,0.207376382794494,0,0,0,0,7.9690672888342,0.138674673013139,7.98374796341602,4.31166548623262,3.65648667637691,3.66926003308263,0,0.0967563312890851,0,0,1.64881328030313,0,5.42353777873278,0,0,0.126621591911757,0.586654148204409,6.6531820808773,9.39193176853151,0,0.144090417154106,0,5.8342299273068,0.576219191952599,0.124252535565433,6.36373893465348,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.164831716762333,0.0674035438541849,13.5829924490353,0,0,0.272406812223151,0.321506296930038,0.825236619583403,1.24632101408756,0,0,0,5.03152031398899,15.918752874438,4.82582210841983,0,0,6.14128631422225,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,10.6073839488284,0,2.13574825135389,10.375484136578,5.38510771951354,0.992332043623902,52.7623057167511,72.2230108398713,17.8735552175651,0,0,0,0,44.917471527567,0,0,0,1.14681839138014,0.221858103073705,0.124192805882767,0,0.37494122388632,0,0,0,0,5.07223600137888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,5.31542129333889,13.6856997207254,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0.159633859057151,0,0,0.207471757392654,0,0,9.42218097609846,2.35939446695481,25.4965751945134,0.924205329202706,0,0,0,0.376051641746286,0,5.47059807863165,9.69054769581263,0,14.3420403630534,0,0,0,0,0,1.09651553371436,0.496211178389294,0,15.459253744391,0,0,0.606965604236632,1.13831095675649,9.57985597756499,2.30467975111558,0,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| ||
|short_description=p1@RASSF6 | |short_description=p1@RASSF6 | ||
}} | }} |
Latest revision as of 13:41, 18 September 2015
Short description: | p1@RASSF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RASSF6_5end |
Coexpression cluster: | C1523_diffuse_small_lymphoma_thymus_Burkitt_lymphangiectasia_b |
Association with transcript: | 0bp_to_ENST00000395777, ENST00000512591, NM_177532, uc003hhc.1, uc010iik.1_5end |
EntrezGene: | RASSF6 |
HGNC: | 20796 |
UniProt: | Q6ZTQ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.75e-16 | 253 |
endo-epithelial cell | 1.43e-14 | 42 |
lymphocyte of B lineage | 1.02e-12 | 24 |
pro-B cell | 1.02e-12 | 24 |
endodermal cell | 5.68e-12 | 58 |
general ecto-epithelial cell | 2.54e-08 | 14 |
B cell | 1.14e-07 | 14 |
epithelial cell of alimentary canal | 1.15e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.07e-17 | 160 |
endoderm | 1.07e-17 | 160 |
presumptive endoderm | 1.07e-17 | 160 |
digestive system | 1.13e-13 | 145 |
digestive tract | 1.13e-13 | 145 |
primitive gut | 1.13e-13 | 145 |
subdivision of digestive tract | 2.13e-11 | 118 |
respiratory system | 9.66e-10 | 74 |
endo-epithelium | 1.50e-08 | 82 |
renal system | 1.62e-08 | 48 |
urinary system structure | 4.42e-08 | 47 |
anterior region of body | 8.09e-08 | 62 |
craniocervical region | 8.09e-08 | 62 |
trunk region element | 2.40e-07 | 101 |
gastrointestinal system | 4.36e-07 | 25 |
orifice | 6.35e-07 | 36 |
intestine | 6.45e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.34e-10 | 14 |
carcinoma | 6.93e-09 | 106 |