FFCP PHASE1:Hg19::chr19:45281118..45281181,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23624 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15961 | |||
|TSSclassifier=strong | |||
|UniProt=Q9ULV8 | |||
|association_with_transcript=0bp_to_ENST00000270279,ENST00000341505,NM_001130852,NM_012116,uc002ozs.2,uc010ejt.2_5end | |||
|cluster_id=chr19:45281118..45281181,+ | |||
|coexpression_cluster_id=C1455 | |||
|description=CAGE_peak_1_at_CBLC_5end | |||
|id=chr19:45281118..45281181,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.75e-27!254;CL:0000223!1.09e-18!59;CL:0002076!1.27e-18!43;CL:0002368!3.43e-10!13;CL:0002251!7.65e-09!21;CL:0002202!3.23e-07!9;CL:0002632!3.23e-07!9;CL:1000497!5.03e-07!18;CL:0002518!5.03e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002076;9.41e-19;42!CL:0002368;9.86e-13;13!CL:0002251;3.72e-11;20!CL:0002202;5.87e-09;9!CL:0002632;5.87e-09;9!CL:0002159;1.28e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.41e-33,253;CL:0000223,3.90e-25,58;CL:0002076,2.85e-24,42;CL:0002368,9.61e-13,13;CL:0002251,3.85e-11,20;CL:0002202,5.81e-09,9;CL:0002632,5.81e-09,9;CL:0002159,1.30e-07,14;CL:1000497,9.70e-07,17;CL:0002518,9.70e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000223;9.31e-14;58 | |||
|ontology_enrichment_disease=DOID:305!1.04e-09!106;DOID:1749!6.22e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;4.00e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.61e-13,106;DOID:1749,4.02e-11,14;DOID:0050687,6.04e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.42e-23!169;UBERON:0000925!4.42e-23!169;UBERON:0006595!4.42e-23!169;UBERON:0001007!4.05e-17!155;UBERON:0001555!4.05e-17!155;UBERON:0007026!4.05e-17!155;UBERON:0000466!8.35e-17!126;UBERON:0004921!7.02e-15!129;UBERON:0004185!7.02e-15!129;UBERON:0000464!1.62e-14!104;UBERON:0000077!2.25e-13!130;UBERON:0005911!6.35e-13!82;UBERON:0000481!8.32e-13!347;UBERON:0001008!4.05e-12!45;UBERON:0006554!1.04e-11!44;UBERON:0000922!1.08e-11!612;UBERON:0000062!3.10e-11!511;UBERON:0000064!1.36e-10!219;UBERON:0005177!1.66e-10!107;UBERON:0001004!2.80e-10!72;UBERON:0000468!2.86e-10!659;UBERON:0000161!1.53e-09!35;UBERON:0002050!1.72e-09!605;UBERON:0005423!1.72e-09!605;UBERON:0000923!3.33e-09!604;UBERON:0005291!3.33e-09!604;UBERON:0006598!3.33e-09!604;UBERON:0002532!3.33e-09!604;UBERON:0002553!5.39e-09!70;UBERON:0003104!7.42e-09!238;UBERON:0009142!7.42e-09!238;UBERON:0000467!1.26e-08!625;UBERON:0000480!1.63e-08!626;UBERON:0005156!1.64e-08!59;UBERON:0000990!1.64e-08!59;UBERON:0003064!3.53e-08!37;UBERON:0001048!4.48e-08!168;UBERON:0000058!4.66e-08!26;UBERON:0001041!4.77e-08!98;UBERON:0005153!8.83e-08!37;UBERON:0000475!1.07e-07!365;UBERON:0003929!1.40e-07!54;UBERON:0009569!1.64e-07!113;UBERON:0002365!3.76e-07!31;UBERON:0002330!3.76e-07!31;UBERON:0000080!4.04e-07!18;UBERON:0002120!4.04e-07!18;UBERON:0004875!4.04e-07!18;UBERON:0005721!4.04e-07!18;UBERON:0005754!4.04e-07!18;UBERON:0007297!4.04e-07!18;UBERON:0001444!5.18e-07!48;UBERON:0003133!5.39e-07!48;UBERON:0002530!6.00e-07!59;UBERON:0004876!6.37e-07!20;UBERON:0005181!7.76e-07!35;UBERON:0000344!8.05e-07!12;UBERON:0000166!8.95e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;3.98e-11;33!UBERON:0006554;7.75e-10;30!UBERON:0001008;7.75e-10;30!UBERON:0001555;2.08e-08;54!UBERON:0005409;3.10e-08;22!UBERON:0002365;4.25e-08;31!UBERON:0002330;4.25e-08;31!UBERON:0001007;1.37e-07;81!UBERON:0000344;1.60e-07;20!UBERON:0003101;2.51e-07;22!UBERON:0000079;2.51e-07;22!UBERON:0000160;2.80e-07;17!UBERON:0000365;4.61e-07;5!UBERON:0000161;8.44e-07;19!UBERON:0000166;8.44e-07;19!UBERON:0007196;8.61e-07;15!UBERON:0001558;8.61e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.23e-27,160;UBERON:0000925,4.23e-27,160;UBERON:0006595,4.23e-27,160;UBERON:0001007,2.03e-20,145;UBERON:0001555,2.03e-20,145;UBERON:0007026,2.03e-20,145;UBERON:0004921,1.22e-18,118;UBERON:0001008,6.38e-15,48;UBERON:0006554,2.08e-14,47;UBERON:0005911,3.07e-13,82;UBERON:0005177,7.40e-13,101;UBERON:0000161,1.05e-10,36;UBERON:0001041,4.53e-10,87;UBERON:0005156,6.56e-10,59;UBERON:0000990,6.56e-10,59;UBERON:0000922,8.88e-10,592;UBERON:0001004,1.05e-09,74;UBERON:0002365,3.08e-08,31;UBERON:0002330,3.08e-08,31;UBERON:0003133,3.68e-08,48;UBERON:0009569,4.27e-08,112;UBERON:0005153,5.23e-08,37;UBERON:0005423,5.82e-08,581;UBERON:0003929,1.01e-07,54;UBERON:0000344,1.61e-07,20;UBERON:0000166,2.22e-07,22;UBERON:0003101,2.32e-07,22;UBERON:0000079,2.32e-07,22;UBERON:0000160,2.87e-07,17;UBERON:0001048,3.52e-07,160;UBERON:0002530,3.58e-07,59;UBERON:0000153,3.76e-07,62;UBERON:0007811,3.76e-07,62;UBERON:0005172,4.22e-07,54;UBERON:0005173,4.22e-07,54;UBERON:0000365,4.67e-07,5;UBERON:0000033,7.21e-07,56;UBERON:0001046,7.50e-07,19;UBERON:0007196,8.38e-07,15;UBERON:0001558,8.38e-07,15;UBERON:0005157,8.64e-07,47;UBERON:0003100,8.72e-07,41;UBERON:0005409,9.44e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,31.9454117451962,158.400865129741,2.62129646556207,6.33040747748289,0,0,0,0,0,0,1.35433163884467,0.612002073732759,2.5076377718247,1.43117993565528,1.91624195102038,0.125542639594803,0,0,0,0,0,0,140.671447345276,128.614927318313,129.783657568542,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,7.37371573879729,5.5432349365641,1.84453049955565,6.09052701064364,196.35516038968,160.920448168442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,0,0,0.183201743930407,0,0,144.347131259179,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0.468642863667593,0,1.1409436430889,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0.10075209822764,0,47.1556481718444,37.3662185209443,42.7338847129616,24.8826360504375,18.6866973333294,17.3128974875582,9.74413917144482,12.868363394657,14.964071722109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.1669132322957,42.2615703171379,20.0868568271677,0,84.9850110332915,1.20097467208968,80.885960346157,185.462892875072,84.9469816878281,59.5343702369345,0.325808305310325,0,21.649701303791,3.4779121492523,0.234817388471643,0,0,0,0,0,0,0,0,26.2454735162976,7.22323151255096,35.3019992133542,47.6451340779153,59.5799573953622,118.46524786205,0,0,0.207328115540772,0.288239906833923,0.37872730027914,0.317489471460845,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0.542621605391443,0.823240336780769,0,0,3.16780749173372,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,3.63753085735511,11.6504807657348,3.0239029332968,0,0,0,0,0,0,1.48418066444991,0,0,0.164254312027618,0,0,54.8701901145965,52.5326952194606,84.4382668542169,0,0,0.131124414959424,28.4255756131669,7.93257972175472,37.648788920489,4.38417673959782,1.79437769117889,0,0.340187410553031,0.215915916102139,1.54227252690289,0.541892875087706,1.50506932156456,22.9388645740534,39.06057241965,10.5221134719424,0,0,0.512900250232778,0.656029291399411,0,9.68585509488589,0,0,114.278842061238,85.1578922307843,0,0.096670718292122,0.308097234229289,0.15350367472613,0,0.214840489736547,0.290033387828457,0.340906509664404,0,37.850245617664,33.6332617888936,77.8437546216963,30.9542809417983,0,0,1.3940745403212,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,0,0,0,0.353437207037059,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,93.4316714564722,170.25677798609,210.159600782353,11.0148246908832,107.195837795136,183.633908477712,129.481604832709,55.5930628500842,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,24.7490618140842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.762129688181,0,0,0,0,7.63982351160608,8.61197574414652,10.7506245734731,0,0.562677665642051,0,0,4.22250816255987,2.39097585901284,14.3667636076197,6.55025144421118,0,0,0,28.3983989625553,24.7049221052341,0,11.837208676432,0,0,0,0,0,0,12.3318599994636,7.24999575434793,30.1552637956574,27.4593942316188,30.9667863115997,0,0,0,0,0,0,0,0,0,0,61.7647187154213,6.69467248983034,0,18.6756762554329,34.0181472313036,35.0931011308086,3.50901275705111,0.732780747214898,0.533034776018635,0,0,0,0,0,0,0,0,0,0.326465616318295,27.2811427867506,0,81.6114783484374,64.1317342649209,30.5515072466813,0,0,0,0.067401132980677,0.802577647298789,0,0,45.3941915922448,0,4.3404284313433,33.8774004936259,0,0,0,0,0,0,0,0,2.84609546029793,0,70.6388135023983,80.7457354694472,13.4941770199624,2.44617335538842,0,0,0,0,34.3341118369005,0,4.06765333404958,0,0,0.379864775735272,41.8479959052478,24.3682813564662,30.9506842372061,0,85.0133461209225,0,1.02956998717179,9.79572626319418,0,24.7478736347635,0,0,0,0,0,0,0,0,0,0.558564802544508,0,0,23.7618010593799,0,0,0.0671834724867263,0,5.82479747637269,2.36349546921671,3.37905019362782,2.29172049104229,0,0,0,0.953423842781029,14.1462770649217,10.4529971813898,9.55512777467126,3.82455615637551,64.2255622283098,0.242998226632099,26.499340320342,6.69848512043184,10.9105543320796,0,0,22.4540780863751,0,0,0,0,0,0,0,0,0,0,19.491447079185,6.62534444561107,0,0,0,26.7829708480335,2.45611048905698,0.943225830597996,2.48543433208317,0,0,0,44.0455467861425,0,0,0,0,18.3753292612774,0,0.122026264901963,0,0,0.221858103073705,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0,0,0.521745061811734,0.300515217994437,0,0,0,1.50374779859484,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,59.1673945404156,0,0,0,0,0,125.052279901183,97.0440525651438,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,33.9591106013549,51.3168296562671,20.1771458373847,42.1668681448735,0,0,0,1.20336525358812,0,24.2269343482259,32.214523421215,0,42.1389845718579,0.270150338473579,0,0.206686796501184,0,0,14.8029597051439,6.94695649745012,0.351742488719241,5.87707167142138,0,0,0,1.13831095675649,5.49954695008361,0,0,0,0.0657727735628491,14.4196485878441,8.23112374001312,10.7535537205204,0,29.9891214745754,14.6105395281519,2.15927591218621,3.34426181520935,0.714765441766563,0,0,0,0,1.24329698497822,0.51215543128185,3.45629830907046,20.6509132233733,0,0,8.89112805400951,4.582137370881,0,0,61.5204874887858,14.133633640595,30.6013991705496,0,0,0,9.71421986118279,1.87151570769685,0,0.356760272332706,0,0.219881033490858,6.49140227336696,101.561192070055,46.116067266335,46.5614123397908,0.245148321753905,12.2551804492845,0,0,0,0,0,0,0,39.2818664932447,4.94052820401969,0,13.1460549884373,7.79839781787719,0,0,0.339957450954573,0,36.5028519955626,0,0,0,0.126166424835079,0.98339014767326,0,2.75369840303351,10.6886962106224,2.57305718697566,28.079244400746,1.59135266258303,2.67964130156179,0,0,15.9925486425736,1.1903221573187,0.452122368852043,1.36564371450887,0.560659312903067,2.67318064768293,0.202117188958219,17.8527733275508,4.79126621519393,22.8996980249598,22.9511057256564,11.9757728356565,32.072887832724,0,0,0,16.4248659682418,2.81155321620593,8.95171592294625,5.99181096766961,0.201273793591026,0 | |||
|short_description=p1@CBLC | |||
}} |
Latest revision as of 14:14, 18 September 2015
Short description: | p1@CBLC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CBLC_5end |
Coexpression cluster: | C1455_Tracheal_Corneal_Keratinocyte_Mammary_Urothelial_Bronchial_Esophageal |
Association with transcript: | 0bp_to_ENST00000270279, ENST00000341505, NM_001130852, NM_012116, uc002ozs.2, uc010ejt.2_5end |
EntrezGene: | CBLC |
HGNC: | 15961 |
UniProt: | Q9ULV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.41e-33 | 253 |
endodermal cell | 3.90e-25 | 58 |
endo-epithelial cell | 2.85e-24 | 42 |
respiratory epithelial cell | 9.61e-13 | 13 |
epithelial cell of alimentary canal | 3.85e-11 | 20 |
epithelial cell of tracheobronchial tree | 5.81e-09 | 9 |
epithelial cell of lower respiratory tract | 5.81e-09 | 9 |
general ecto-epithelial cell | 1.30e-07 | 14 |
kidney cell | 9.70e-07 | 17 |
kidney epithelial cell | 9.70e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.61e-13 | 106 |
squamous cell carcinoma | 4.02e-11 | 14 |
cell type cancer | 6.04e-08 | 143 |