FFCP PHASE1:Hg19::chr1:55267166..55267181,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55001 | |EntrezGene=55001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26067 | |HGNC=26067 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TAA0 | |UniProt=Q5TAA0 | ||
|association_with_transcript=-225bp_to_NM_001114108,NM_017904,uc001cxz.3,uc009vzt.1_5end | |association_with_transcript=-225bp_to_NM_001114108,NM_017904,uc001cxz.3,uc009vzt.1_5end | ||
|cluster_id=chr1:55267166..55267181,- | |||
|description=CAGE_peak_6_at_TTC22_5end | |description=CAGE_peak_6_at_TTC22_5end | ||
|id=chr1:55267166..55267181,- | |id=chr1:55267166..55267181,- | ||
|ontology_enrichment_celltype=CL:0000791!4.16e-19!18;CL:0000789!4.16e-19!18;CL:0002420!4.16e-19!18;CL:0002419!4.16e-19!18;CL:0000790!4.16e-19!18;CL:0000625!5.46e-18!11;CL:0000838!7.35e-18!52;CL:0000542!2.24e-17!53;CL:0000051!2.24e-17!53;CL:0000084!8.06e-17!25;CL:0000827!8.06e-17!25;CL:0000738!2.80e-07!140 | |ontology_enrichment_celltype=CL:0000791!4.16e-19!18;CL:0000789!4.16e-19!18;CL:0002420!4.16e-19!18;CL:0002419!4.16e-19!18;CL:0000790!4.16e-19!18;CL:0000625!5.46e-18!11;CL:0000838!7.35e-18!52;CL:0000542!2.24e-17!53;CL:0000051!2.24e-17!53;CL:0000084!8.06e-17!25;CL:0000827!8.06e-17!25;CL:0000738!2.80e-07!140 | ||
|ontology_enrichment_celltype_v019=CL:0000625;1.19e-37;11!CL:0000791;6.17e-23;18!CL:0000789;6.17e-23;18!CL:0002419;6.17e-23;18!CL:0000084;3.34e-22;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.91e-38,11;CL:0000791,5.51e-23,18;CL:0000789,5.51e-23,18;CL:0002420,5.51e-23,18;CL:0002419,5.51e-23,18;CL:0000790,5.51e-23,18;CL:0000084,3.63e-22,25;CL:0000827,3.63e-22,25;CL:0000838,2.31e-10,52;CL:0000542,3.72e-10,53;CL:0000051,3.72e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000790;6.17e-23;18!UBERON:0009143;1.82e-13;1!UBERON:0008801;5.06e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.06e-13;1!DOID:3149;5.06e-13;1!DOID:3451;3.81e-07;2!DOID:4159;3.81e-07;2!DOID:0060122;3.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.76e-13,1;DOID:3149,3.76e-13,1;DOID:3451,3.28e-07,2;DOID:4159,3.28e-07,2;DOID:0060122,3.28e-07,2 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.05e-13;1!UBERON:0001961;2.05e-13;1!UBERON:0001744;2.05e-13;1!UBERON:0001042;2.05e-13;1!UBERON:0001735;2.05e-13;1!UBERON:0005795;5.06e-13;1!UBERON:0001831;5.06e-13;1!UBERON:0001567;5.06e-13;1!UBERON:0006562;2.43e-07;2!UBERON:0000341;3.81e-07;2!UBERON:0001829;3.81e-07;2!UBERON:0004089;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.06e-13,1;UBERON:0001961,2.06e-13,1;UBERON:0001744,2.06e-13,1;UBERON:0001735,2.06e-13,1;UBERON:0001831,6.82e-13,1;UBERON:0001567,6.82e-13,1;UBERON:0008801,6.82e-13,1;UBERON:0000341,2.58e-07,2;UBERON:0001829,4.42e-07,2;UBERON:0004089,4.42e-07,2 | |||
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| ||
|short_description=p6@TTC22 | |short_description=p6@TTC22 | ||
}} | }} |
Latest revision as of 15:08, 18 September 2015
Short description: | p6@TTC22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TTC22_5end |
Coexpression cluster: | NA |
Association with transcript: | -225bp_to_NM_001114108, NM_017904, uc001cxz.3, uc009vzt.1_5end |
EntrezGene: | TTC22 |
HGNC: | 26067 |
UniProt: | Q5TAA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.91e-38 | 11 |
mature alpha-beta T cell | 5.51e-23 | 18 |
alpha-beta T cell | 5.51e-23 | 18 |
immature T cell | 5.51e-23 | 18 |
mature T cell | 5.51e-23 | 18 |
immature alpha-beta T cell | 5.51e-23 | 18 |
T cell | 3.63e-22 | 25 |
pro-T cell | 3.63e-22 | 25 |
lymphoid lineage restricted progenitor cell | 2.31e-10 | 52 |
lymphocyte | 3.72e-10 | 53 |
common lymphoid progenitor | 3.72e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.06e-13 | 1 |
mucosa-associated lymphoid tissue | 2.06e-13 | 1 |
lymphoid tissue | 2.06e-13 | 1 |
tonsillar ring | 2.06e-13 | 1 |
parotid gland | 6.82e-13 | 1 |
cheek | 6.82e-13 | 1 |
parotid gland primordium | 6.82e-13 | 1 |
throat | 2.58e-07 | 2 |
major salivary gland | 4.42e-07 | 2 |
midface | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.76e-13 | 1 |
keratoacanthoma | 3.76e-13 | 1 |
skin carcinoma | 3.28e-07 | 2 |
skin cancer | 3.28e-07 | 2 |
integumentary system cancer | 3.28e-07 | 2 |