FFCP PHASE1:Hg19::chr1:55267166..55267181,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:55267166..55267181,- to FFCP PHASE1:Hg19::chr1:55267166..55267181,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55001 | |EntrezGene=55001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26067 | |HGNC=26067 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TAA0 | |UniProt=Q5TAA0 | ||
|association_with_transcript=-225bp_to_NM_001114108,NM_017904,uc001cxz.3,uc009vzt.1_5end | |||
|cluster_id=chr1:55267166..55267181,- | |||
|description=CAGE_peak_6_at_TTC22_5end | |||
|id=chr1:55267166..55267181,- | |||
|ontology_enrichment_celltype=CL:0000791!4.16e-19!18;CL:0000789!4.16e-19!18;CL:0002420!4.16e-19!18;CL:0002419!4.16e-19!18;CL:0000790!4.16e-19!18;CL:0000625!5.46e-18!11;CL:0000838!7.35e-18!52;CL:0000542!2.24e-17!53;CL:0000051!2.24e-17!53;CL:0000084!8.06e-17!25;CL:0000827!8.06e-17!25;CL:0000738!2.80e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000625;1.19e-37;11!CL:0000791;6.17e-23;18!CL:0000789;6.17e-23;18!CL:0002419;6.17e-23;18!CL:0000084;3.34e-22;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,9.91e-38,11;CL:0000791,5.51e-23,18;CL:0000789,5.51e-23,18;CL:0002420,5.51e-23,18;CL:0002419,5.51e-23,18;CL:0000790,5.51e-23,18;CL:0000084,3.63e-22,25;CL:0000827,3.63e-22,25;CL:0000838,2.31e-10,52;CL:0000542,3.72e-10,53;CL:0000051,3.72e-10,53 | |||
|ontology_enrichment_development_v019=CL:0000790;6.17e-23;18!UBERON:0009143;1.82e-13;1!UBERON:0008801;5.06e-13;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;5.06e-13;1!DOID:3149;5.06e-13;1!DOID:3451;3.81e-07;2!DOID:4159;3.81e-07;2!DOID:0060122;3.81e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,3.76e-13,1;DOID:3149,3.76e-13,1;DOID:3451,3.28e-07,2;DOID:4159,3.28e-07,2;DOID:0060122,3.28e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;2.05e-13;1!UBERON:0001961;2.05e-13;1!UBERON:0001744;2.05e-13;1!UBERON:0001042;2.05e-13;1!UBERON:0001735;2.05e-13;1!UBERON:0005795;5.06e-13;1!UBERON:0001831;5.06e-13;1!UBERON:0001567;5.06e-13;1!UBERON:0006562;2.43e-07;2!UBERON:0000341;3.81e-07;2!UBERON:0001829;3.81e-07;2!UBERON:0004089;3.81e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,2.06e-13,1;UBERON:0001961,2.06e-13,1;UBERON:0001744,2.06e-13,1;UBERON:0001735,2.06e-13,1;UBERON:0001831,6.82e-13,1;UBERON:0001567,6.82e-13,1;UBERON:0008801,6.82e-13,1;UBERON:0000341,2.58e-07,2;UBERON:0001829,4.42e-07,2;UBERON:0004089,4.42e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0.0787107813136792,0.393364276848904,0.767658796194425,0,0.919421224478927,0.30120591877825,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.501559486172034,0,0.473447805734733,0,0.445641827540694,0.589211814949674,0.664601683750863,0.812411591295047,1.0247305578054,0.520237390239513,0.328875809207352,0.829050053357545,0,0.296573126324121,0.535081656179426,0,0.793165398882963,0.383220493601921,1.03088233644789,0.506039384039006,1.27426165729639,0.651083453856419,0,1.35517607169996,1.4078527226986,1.24930726552346,0.710331756132051,0.821127996921047,1.00803371612366,1.33720097891754,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.646882724578552,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.368323955743585,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0.476463550915578,0.822724546172388,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0,0,0,1.76985594558733,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.973033209536731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,4.07353869251362,0,0,0,0,0,0,0,0.426905989478705,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,6.01958433241968,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,0,0.193766729508018,0,0,0,0,0.870866991587845,0.684466602170562,2.1552656964668,0.78894425931944,0,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0,0.0787107813136792,0.393364276848904,0.767658796194425,0,0.919421224478927,0.30120591877825,0,0,0,0,0.553995408531877,0.200544447470142,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.501559486172034,0,0.473447805734733,0,0.445641827540694,0.589211814949674,0.664601683750863,0.812411591295047,1.0247305578054,0.520237390239513,0.328875809207352,0.829050053357545,0,0.296573126324121,0.535081656179426,0,0.793165398882963,0.383220493601921,1.03088233644789,0.506039384039006,1.27426165729639,0.651083453856419,0,1.35517607169996,1.4078527226986,1.24930726552346,0.710331756132051,0.821127996921047,1.00803371612366,1.33720097891754,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0.646882724578552,0.256686072559497,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0.368323955743585,0,0,0,0.451199612907412,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0.476463550915578,0.822724546172388,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0.593929361665277,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0,0,0,0,1.76985594558733,0,0,0,0,0,0,0,1.02193298195737,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.973033209536731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,4.07353869251362,0,0,0,0,0,0,0,0.426905989478705,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34173875039706,0.236417121897595,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,1.09651553371436,0.496211178389294,0,0,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0.078493092850514,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,6.01958433241968,0,0,0,0,0,0,0,0,0.0939839179798536,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91910583710883,0,0.193766729508018,0,0,0,0,0.870866991587845,0.684466602170562,2.1552656964668,0.78894425931944,0,0,0,0,0,0,0.122241444182866,1.22068853494722,0,0,0.320568492303233 | ||
|short_description=p6@TTC22 | |||
}} | }} |
Latest revision as of 15:08, 18 September 2015
Short description: | p6@TTC22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TTC22_5end |
Coexpression cluster: | NA |
Association with transcript: | -225bp_to_NM_001114108, NM_017904, uc001cxz.3, uc009vzt.1_5end |
EntrezGene: | TTC22 |
HGNC: | 26067 |
UniProt: | Q5TAA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 9.91e-38 | 11 |
mature alpha-beta T cell | 5.51e-23 | 18 |
alpha-beta T cell | 5.51e-23 | 18 |
immature T cell | 5.51e-23 | 18 |
mature T cell | 5.51e-23 | 18 |
immature alpha-beta T cell | 5.51e-23 | 18 |
T cell | 3.63e-22 | 25 |
pro-T cell | 3.63e-22 | 25 |
lymphoid lineage restricted progenitor cell | 2.31e-10 | 52 |
lymphocyte | 3.72e-10 | 53 |
common lymphoid progenitor | 3.72e-10 | 53 |
Ontology term | p-value | n |
---|---|---|
tonsil | 2.06e-13 | 1 |
mucosa-associated lymphoid tissue | 2.06e-13 | 1 |
lymphoid tissue | 2.06e-13 | 1 |
tonsillar ring | 2.06e-13 | 1 |
parotid gland | 6.82e-13 | 1 |
cheek | 6.82e-13 | 1 |
parotid gland primordium | 6.82e-13 | 1 |
throat | 2.58e-07 | 2 |
major salivary gland | 4.42e-07 | 2 |
midface | 4.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 3.76e-13 | 1 |
keratoacanthoma | 3.76e-13 | 1 |
skin carcinoma | 3.28e-07 | 2 |
skin cancer | 3.28e-07 | 2 |
integumentary system cancer | 3.28e-07 | 2 |