FFCP PHASE1:Hg19::chr1:55331310..55331365,-: Difference between revisions
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1718 | |EntrezGene=1718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2859 | |HGNC=2859 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010ooi.1_5end | |||
|cluster_id=chr1:55331310..55331365,- | |||
|description=CAGE_peak_3_at_DHCR24_5end | |||
|id=chr1:55331310..55331365,- | |||
|ontology_enrichment_celltype=CL:1000507!2.80e-24!12;CL:1000494!2.80e-24!12;CL:1000497!1.52e-23!18;CL:0002518!1.52e-23!18;CL:1000449!8.75e-18!16;CL:0000181!2.25e-15!12;CL:0000417!2.25e-15!12;CL:0000668!2.25e-15!12;CL:0000414!2.25e-15!12;CL:0000412!2.25e-15!12;CL:0000182!2.25e-15!12;CL:0002681!6.60e-10!13;CL:0002584!6.60e-10!13;CL:0000066!2.55e-08!254;CL:0000159!3.02e-08!2;CL:0000223!8.53e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.87e-27;17!CL:0002518;2.87e-27;17!CL:1000507;9.52e-27;10!CL:1000494;9.52e-27;10!CL:1000449;1.05e-17;15!CL:0000182;2.56e-16;12!CL:0000239;5.16e-11;3!CL:1000615;5.16e-11;3!CL:0002306;5.16e-11;3!CL:0002581;9.53e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,3.14e-27,17;CL:0002518,3.14e-27,17;CL:1000507,1.07e-26,10;CL:1000494,1.07e-26,10;CL:1000449,1.13e-17,15;CL:0000182,2.44e-16,12;CL:0000239,5.16e-11,3;CL:1000615,5.16e-11,3;CL:0002306,5.16e-11,3;CL:0002581,8.49e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.02e-19;31!UBERON:0004161;9.26e-18;11!UBERON:0009497;5.23e-15;13!UBERON:0003918;1.43e-12;10!UBERON:0007687;1.43e-12;10 | |||
|ontology_enrichment_disease=DOID:4468!1.22e-08!2;DOID:299!3.26e-08!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p3@DHCR24 | |||
}} | }} |
Latest revision as of 15:09, 18 September 2015
Short description: | p3@DHCR24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DHCR24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_uc010ooi.1_5end |
EntrezGene: | DHCR24 |
HGNC: | 2859 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 3.14e-27 | 17 |
kidney epithelial cell | 3.14e-27 | 17 |
kidney tubule cell | 1.07e-26 | 10 |
nephron tubule epithelial cell | 1.07e-26 | 10 |
epithelial cell of nephron | 1.13e-17 | 15 |
hepatocyte | 2.44e-16 | 12 |
brush border epithelial cell | 5.16e-11 | 3 |
kidney cortex tubule cell | 5.16e-11 | 3 |
epithelial cell of proximal tubule | 5.16e-11 | 3 |
perirenal preadipocyte | 8.49e-09 | 1 |