FFCP PHASE1:Hg19::chr6:37665792..37665803,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=266727 | |EntrezGene=266727 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19267 | |HGNC=19267 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NFP4 | |UniProt=Q8NFP4 | ||
|association_with_transcript=-26bp_to_ENST00000297153,ENST00000434837,NM_153487,uc003onu.1_5end | |association_with_transcript=-26bp_to_ENST00000297153,ENST00000434837,NM_153487,uc003onu.1_5end | ||
|cluster_id=chr6:37665792..37665803,- | |||
|description=CAGE_peak_5_at_MDGA1_5end | |description=CAGE_peak_5_at_MDGA1_5end | ||
|id=chr6:37665792..37665803,- | |id=chr6:37665792..37665803,- | ||
|ontology_enrichment_celltype=CL:0000838!6.61e-13!52;CL:0000542!1.73e-12!53;CL:0000051!1.73e-12!53;CL:0000236!8.20e-11!14;CL:0000945!3.98e-09!24;CL:0000826!3.98e-09!24 | |ontology_enrichment_celltype=CL:0000838!6.61e-13!52;CL:0000542!1.73e-12!53;CL:0000051!1.73e-12!53;CL:0000236!8.20e-11!14;CL:0000945!3.98e-09!24;CL:0000826!3.98e-09!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.23e-22;13!CL:0000945;8.81e-16;24!CL:0002567;1.77e-11;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.84e-20,14;CL:0000945,9.34e-16,24;CL:0000826,9.34e-16,24;CL:0002567,2.31e-11,3;CL:0000838,6.66e-09,52;CL:0000542,1.03e-08,53;CL:0000051,1.03e-08,53 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.12e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;3.12e-09;1!DOID:0050177;3.12e-09;1!DOID:0050427;3.12e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,3.25e-09,1;DOID:0050177,3.25e-09,1;DOID:0050427,3.25e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0003075!9.74e-07!86;UBERON:0007284!9.74e-07!86 | |ontology_enrichment_uberon=UBERON:0003075!9.74e-07!86;UBERON:0007284!9.74e-07!86 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.26e-17;2!UBERON:0002757;1.26e-17;2!UBERON:0010134;1.26e-17;2!UBERON:0005408;1.26e-17;2!UBERON:0001899;1.26e-17;2!UBERON:0003296;2.88e-09;4!UBERON:0010133;2.88e-09;4!UBERON:0002784;2.88e-09;4!UBERON:0001154;3.12e-09;1!UBERON:0001153;3.12e-09;1!UBERON:0009854;3.12e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.16e-17,2;UBERON:0002757,1.16e-17,2;UBERON:0010134,1.16e-17,2;UBERON:0005408,1.16e-17,2;UBERON:0001899,1.16e-17,2;UBERON:0001154,1.99e-09,1;UBERON:0001153,1.99e-09,1;UBERON:0001045,1.99e-09,1;UBERON:0003296,2.77e-09,4;UBERON:0010133,2.77e-09,4;UBERON:0002784,2.77e-09,4 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0,0.410623275218653,0.251085279189606,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,1.9791078011203,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0.546138611262131,3.55803701545422,1.70692089026603,0.800791974072025,3.4485146397269,1.32208974556972,3.81621501814146,0,0.587237189370939,0.764546456250458,0,0,0,0.393419540227666,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.339928028092699,0.383220493601921,0,0,0.637130828648193,0,0,0.451725357233318,0.639933055772092,2.49861453104692,0.473554504088034,0,0,0,0.289648807765598,0,0.670700859703636,0,0,0,0,0,0,0.567208902984407,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14596527667483,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0,0,0,0,0.239624855491583,0,0,0,0,0,0.560425719967636,0,0,0.513372145118994,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,0,1.19115887728894,1.64544909234478,0,0,0,0.106824071127473,1.92495971052672,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0,0,0,5.01268954180134,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0.111308705022906,0.16480387422676,0.844501632511974,0,1.93398740871803,0,0.102268682502155,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,1.99613798001194,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,4.20201187738654,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0.303298235083296,0,0.235265819698172,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0.398095888698616,0,0.686791410365586,0,0,0,0,0,0.453411851024545,0,0,0.358177682162975,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0.558644917973244,0,0.315446980005013,0,0,0,0.128458450192919,0,0.159633859057151,0,1.26035848110859,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0,0,0,2.67850917939143,5.04425583328236,0,0.455324382702595,0,0.230467975111559,0.171488009437418,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0.581207126840626,0,0,0,0,0,0,0,0.170426809518315,0,0.4582137370881,0,0,0,0,0,0,0,0,0.485710993059139,0,0.397901550322736,0.237840181555137,0,0.329821550236287,0,0,0,0,0.245148321753905,0,0.392616934229891,0,0,0,0,0.193373663920732,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.190941474834495,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0,0,0,0.410623275218653,0.251085279189606,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0.154934401160603,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,1.9791078011203,0,0,0.290209238628584,0,0,0.502497330513487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0.546138611262131,3.55803701545422,1.70692089026603,0.800791974072025,3.4485146397269,1.32208974556972,3.81621501814146,0,0.587237189370939,0.764546456250458,0,0,0,0.393419540227666,0,0.411202997999018,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.339928028092699,0.383220493601921,0,0,0.637130828648193,0,0,0.451725357233318,0.639933055772092,2.49861453104692,0.473554504088034,0,0,0,0.289648807765598,0,0.670700859703636,0,0,0,0,0,0,0.567208902984407,0.221729397462564,0.351339142772504,0,0,0,0,0,0,0,0.571994910780128,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0,0,0,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0.463721619900307,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14596527667483,0,1.71072446022705,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0,0,0,0,0.239624855491583,0,0,0,0,0,0.560425719967636,0,0,0.513372145118994,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.153461973288062,0.561320188866147,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0,0,0,0,0.229628896329213,0,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,1.52927441428475,0,1.19115887728894,1.64544909234478,0,0,0,0.106824071127473,1.92495971052672,0.245040215981032,0,0,0.0711418433484141,0.159426272728822,0.199579371432817,0,0,0,0,0,0,5.01268954180134,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0.281338832821026,0.111308705022906,0.16480387422676,0.844501632511974,0,1.93398740871803,0,0.102268682502155,0.123084805461069,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,1.99613798001194,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,4.20201187738654,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0.126373159256976,0,0.207376382794494,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0.837847203816763,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.544813624446302,0,0,0,0,0,0.121499113316049,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.246277562248017,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.250381861413,0,0.110929051536852,0.0620964029413835,0,0,0.303298235083296,0,0.235265819698172,0,0.144921028610825,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0.398095888698616,0,0.686791410365586,0,0,0,0,0,0.453411851024545,0,0,0.358177682162975,0,0,0,0.192914038270915,0,0,0,0,0,0,0.132864840313363,0.163565394255844,0.327609848846413,0,0,0,0,0,0.567515953566836,0,0,0,0.127894371303652,0,0,0.109209638192014,0,0,0,0.558644917973244,0,0.315446980005013,0,0,0,0.128458450192919,0,0.159633859057151,0,1.26035848110859,0.0691572524642179,0.161475645631851,0,0.0981477185010256,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,0.0675375846183947,0,0.413373593002368,0.126831620387814,0,0,0,0,0,2.67850917939143,5.04425583328236,0,0.455324382702595,0,0.230467975111559,0.171488009437418,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0.581207126840626,0,0,0,0,0,0,0,0.170426809518315,0,0.4582137370881,0,0,0,0,0,0,0,0,0.485710993059139,0,0.397901550322736,0.237840181555137,0,0.329821550236287,0,0,0,0,0.245148321753905,0,0.392616934229891,0,0,0,0,0.193373663920732,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,1.38652688589425,0,0,0,0,0.101988829741982,0.26721740526556,0.0918948995348449,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.190941474834495,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,1.60284246151616 | ||
|short_description=p5@MDGA1 | |short_description=p5@MDGA1 | ||
}} | }} |
Latest revision as of 15:39, 18 September 2015
Short description: | p5@MDGA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MDGA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENST00000297153, ENST00000434837, NM_153487, uc003onu.1_5end |
EntrezGene: | MDGA1 |
HGNC: | 19267 |
UniProt: | Q8NFP4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.84e-20 | 14 |
lymphocyte of B lineage | 9.34e-16 | 24 |
pro-B cell | 9.34e-16 | 24 |
light melanocyte | 2.31e-11 | 3 |
lymphoid lineage restricted progenitor cell | 6.66e-09 | 52 |
lymphocyte | 1.03e-08 | 53 |
common lymphoid progenitor | 1.03e-08 | 53 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.16e-17 | 2 |
regional part of epithalamus | 1.16e-17 | 2 |
secretory circumventricular organ | 1.16e-17 | 2 |
circumventricular organ | 1.16e-17 | 2 |
epithalamus | 1.16e-17 | 2 |
vermiform appendix | 1.99e-09 | 1 |
caecum | 1.99e-09 | 1 |
midgut | 1.99e-09 | 1 |
gland of diencephalon | 2.77e-09 | 4 |
neuroendocrine gland | 2.77e-09 | 4 |
regional part of diencephalon | 2.77e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 3.25e-09 | 1 |
monogenic disease | 3.25e-09 | 1 |
xeroderma pigmentosum | 3.25e-09 | 1 |