FFCP PHASE1:Hg19::chr5:73109161..73109171,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64283 | |EntrezGene=64283 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=B5MDA3 | |UniProt=B5MDA3 | ||
|association_with_transcript=-171bp_to_ENST00000296799,NM_001244364,uc011csr.1_5end | |association_with_transcript=-171bp_to_ENST00000296799,NM_001244364,uc011csr.1_5end | ||
|cluster_id=chr5:73109161..73109171,+ | |||
|coexpression_cluster_id=C55 | |||
|description=CAGE_peak_10_at_RGNEF_5end | |description=CAGE_peak_10_at_RGNEF_5end | ||
|id=chr5:73109161..73109171,+ | |id=chr5:73109161..73109171,+ | ||
|ontology_enrichment_celltype=CL:0000223!1.19e-08!59;CL:0000181!2.23e-07!12;CL:0000417!2.23e-07!12;CL:0000668!2.23e-07!12;CL:0000414!2.23e-07!12;CL:0000412!2.23e-07!12;CL:0000182!2.23e-07!12;CL:0000066!2.32e-07!254 | |ontology_enrichment_celltype=CL:0000223!1.19e-08!59;CL:0000181!2.23e-07!12;CL:0000417!2.23e-07!12;CL:0000668!2.23e-07!12;CL:0000414!2.23e-07!12;CL:0000412!2.23e-07!12;CL:0000182!2.23e-07!12;CL:0000066!2.32e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0000182;9.17e-38;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-38,12;CL:0000223,1.35e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;4.36e-41;11!UBERON:0009497;5.97e-35;13!UBERON:0001041;4.24e-27;30!UBERON:0003104;6.04e-15;31 | |||
|ontology_enrichment_disease=DOID:120!1.83e-17!27;DOID:193!3.94e-16!29;DOID:2394!7.55e-13!14;DOID:305!7.90e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:7;7.69e-13;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.38e-12,39;DOID:305,2.62e-08,106 | |||
|ontology_enrichment_uberon=UBERON:0003134!7.51e-10!37;UBERON:0000474!7.51e-10!37;UBERON:0000992!1.09e-09!13;UBERON:0007499!1.18e-09!25;UBERON:0009856!3.03e-09!26;UBERON:0003100!9.64e-09!41;UBERON:0000466!2.75e-08!126;UBERON:0008835!2.98e-08!22;UBERON:0003894!2.98e-08!22;UBERON:0009854!7.26e-08!23;UBERON:0005172!9.60e-08!55;UBERON:0005173!9.60e-08!55;UBERON:0003133!2.99e-07!48;UBERON:0009497!3.47e-07!25;UBERON:0000015!3.47e-07!25;UBERON:0002423!3.47e-07!25;UBERON:0006235!3.47e-07!25;UBERON:0004161!3.47e-07!25;UBERON:0005156!5.47e-07!59;UBERON:0000990!5.47e-07!59;UBERON:0002107!6.85e-07!19;UBERON:0006925!6.85e-07!19;UBERON:0008836!6.85e-07!19;UBERON:0002417!8.27e-07!61;UBERON:0000916!8.27e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.84e-24;19!UBERON:0006925;2.84e-24;19!UBERON:0002423;1.05e-18;25!UBERON:0002365;3.84e-14;31!UBERON:0002330;3.84e-14;31!UBERON:0002368;2.51e-13;33!UBERON:0000949;2.03e-10;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.73e-24,19;UBERON:0006925,2.73e-24,19;UBERON:0008836,2.73e-24,19;UBERON:0008835,3.99e-21,22;UBERON:0003894,3.99e-21,22;UBERON:0009854,2.97e-20,23;UBERON:0007499,1.02e-18,25;UBERON:0009497,1.02e-18,25;UBERON:0000015,1.02e-18,25;UBERON:0002423,1.02e-18,25;UBERON:0006235,1.02e-18,25;UBERON:0004161,1.02e-18,25;UBERON:0009856,4.90e-18,26;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002368,1.18e-13,35;UBERON:0000949,7.94e-11,45;UBERON:0005911,1.66e-10,82;UBERON:0001041,5.98e-10,87;UBERON:0003929,3.61e-09,54;UBERON:0005172,3.61e-09,54;UBERON:0005173,3.61e-09,54;UBERON:0005177,1.11e-08,101;UBERON:0002530,1.83e-08,59;UBERON:0002417,2.45e-08,60;UBERON:0000916,2.45e-08,60;UBERON:0009569,6.64e-08,112;UBERON:0004921,1.75e-07,118 | |||
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|short_description=p10@RGNEF | |short_description=p10@RGNEF | ||
}} | }} |
Latest revision as of 16:13, 18 September 2015
Short description: | p10@RGNEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RGNEF_5end |
Coexpression cluster: | C55_hepatocellular_Intestinal_liver_Prostate_fibrosarcoma_Hepatocyte_hepatoblastoma |
Association with transcript: | -171bp_to_ENST00000296799, NM_001244364, uc011csr.1_5end |
EntrezGene: | RGNEF |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.61e-38 | 12 |
endodermal cell | 1.35e-08 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 2.73e-24 | 19 |
digestive gland | 2.73e-24 | 19 |
liver bud | 2.73e-24 | 19 |
hepatic diverticulum | 3.99e-21 | 22 |
liver primordium | 3.99e-21 | 22 |
digestive tract diverticulum | 2.97e-20 | 23 |
epithelial sac | 1.02e-18 | 25 |
epithelium of foregut-midgut junction | 1.02e-18 | 25 |
anatomical boundary | 1.02e-18 | 25 |
hepatobiliary system | 1.02e-18 | 25 |
foregut-midgut junction | 1.02e-18 | 25 |
septum transversum | 1.02e-18 | 25 |
sac | 4.90e-18 | 26 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
endocrine gland | 1.18e-13 | 35 |
endocrine system | 7.94e-11 | 45 |
endo-epithelium | 1.66e-10 | 82 |
foregut | 5.98e-10 | 87 |
gut epithelium | 3.61e-09 | 54 |
abdomen element | 3.61e-09 | 54 |
abdominal segment element | 3.61e-09 | 54 |
trunk region element | 1.11e-08 | 101 |
gland | 1.83e-08 | 59 |
abdominal segment of trunk | 2.45e-08 | 60 |
abdomen | 2.45e-08 | 60 |
subdivision of trunk | 6.64e-08 | 112 |
subdivision of digestive tract | 1.75e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.38e-12 | 39 |
carcinoma | 2.62e-08 | 106 |