FFCP PHASE1:Hg19::chr12:49761147..49761166,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=65244 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=18650 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=F8W1X1 | ||
|association_with_transcript=0bp_to_ENST00000549298_5end | |association_with_transcript=0bp_to_ENST00000549298_5end | ||
|cluster_id=chr12:49761147..49761166,+ | |cluster_id=chr12:49761147..49761166,+ |
Latest revision as of 16:21, 18 September 2015
Short description: | p3@SPATS2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SPATS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000549298_5end |
EntrezGene: | SPATS2 |
HGNC: | 18650 |
UniProt: | F8W1X1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@SPATS2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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embryonic cell | 1.73e-28 | 250 |
mesodermal cell | 2.19e-23 | 121 |
epithelial cell | 2.69e-19 | 253 |
squamous epithelial cell | 2.20e-16 | 63 |
muscle precursor cell | 1.19e-15 | 58 |
myoblast | 1.19e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.19e-15 | 58 |
muscle cell | 2.20e-15 | 55 |
smooth muscle cell | 2.21e-13 | 43 |
smooth muscle myoblast | 2.21e-13 | 43 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
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vessel | 1.57e-21 | 68 |
vasculature | 1.66e-21 | 78 |
vascular system | 1.66e-21 | 78 |
epithelial tube open at both ends | 1.98e-19 | 59 |
blood vessel | 1.98e-19 | 59 |
blood vasculature | 1.98e-19 | 59 |
vascular cord | 1.98e-19 | 59 |
artery | 9.10e-19 | 42 |
arterial blood vessel | 9.10e-19 | 42 |
arterial system | 9.10e-19 | 42 |
Showing 1 to 10 of 58 entries