FFCP PHASE1:Hg19::chr21:45287080..45287091,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=326 | |||
|TSSclassifier=strong | |||
|UniProt=C9JQX8 | |||
|association_with_transcript=-31bp_to_ENST00000448287_5end | |||
|cluster_id=chr21:45287080..45287091,+ | |||
|coexpression_cluster_id=C211 | |||
|description=CAGE_peak_9_at_AGPAT3_5end | |||
|id=chr21:45287080..45287091,+ | |||
|ontology_enrichment_celltype=CL:0000624!2.24e-11!6;CL:0000181!1.38e-08!12;CL:0000417!1.38e-08!12;CL:0000668!1.38e-08!12;CL:0000414!1.38e-08!12;CL:0000412!1.38e-08!12;CL:0000182!1.38e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.77e-19;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.31e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.57e-20;11!UBERON:0009497;2.31e-17;13!UBERON:0000358;1.08e-10;1!UBERON:0001041;1.90e-07;30!UBERON:0003104;3.33e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.50e-12!35;UBERON:0005057!4.09e-11!26;UBERON:0009497!9.50e-10!25;UBERON:0000015!9.50e-10!25;UBERON:0002423!9.50e-10!25;UBERON:0006235!9.50e-10!25;UBERON:0004161!9.50e-10!25;UBERON:0004921!1.81e-09!129;UBERON:0004185!1.81e-09!129;UBERON:0008835!3.02e-09!22;UBERON:0003894!3.02e-09!22;UBERON:0002107!6.33e-09!19;UBERON:0006925!6.33e-09!19;UBERON:0008836!6.33e-09!19;UBERON:0009854!9.18e-09!23;UBERON:0000160!1.66e-08!27;UBERON:0007499!6.48e-08!25;UBERON:0009856!1.53e-07!26;UBERON:0001007!1.72e-07!155;UBERON:0001555!1.72e-07!155;UBERON:0007026!1.72e-07!155;UBERON:0003929!4.63e-07!54;UBERON:0004119!5.68e-07!169;UBERON:0000925!5.68e-07!169;UBERON:0006595!5.68e-07!169;UBERON:0005172!6.89e-07!55;UBERON:0005173!6.89e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.75e-24;17!UBERON:0002107;6.03e-23;19!UBERON:0006925;6.03e-23;19!UBERON:0005409;7.28e-19;22!UBERON:0002423;2.80e-17;25!UBERON:0002108;2.90e-17;4!UBERON:0002365;3.43e-13;31!UBERON:0002330;3.43e-13;31!UBERON:0002368;1.84e-11;33!UBERON:0004921;2.01e-11;33!UBERON:0001155;6.99e-10;9!UBERON:0001007;2.61e-09;81!UBERON:0000949;1.83e-08;43!UBERON:0000059;3.58e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.61e-24,17;UBERON:0002107,5.37e-23,19;UBERON:0006925,5.37e-23,19;UBERON:0008836,5.37e-23,19;UBERON:0008835,9.03e-20,22;UBERON:0003894,9.03e-20,22;UBERON:0009854,6.99e-19,23;UBERON:0007499,2.57e-17,25;UBERON:0009497,2.57e-17,25;UBERON:0000015,2.57e-17,25;UBERON:0002423,2.57e-17,25;UBERON:0006235,2.57e-17,25;UBERON:0004161,2.57e-17,25;UBERON:0002108,2.90e-17,4;UBERON:0009856,1.27e-16,26;UBERON:0005409,1.27e-16,25;UBERON:0002365,7.90e-14,31;UBERON:0002330,7.90e-14,31;UBERON:0004921,8.35e-13,118;UBERON:0002368,3.64e-12,35;UBERON:0001007,5.33e-10,145;UBERON:0001555,5.33e-10,145;UBERON:0007026,5.33e-10,145;UBERON:0001155,6.88e-10,9;UBERON:0003929,7.60e-10,54;UBERON:0000949,2.69e-09,45;UBERON:0004119,7.59e-09,160;UBERON:0000925,7.59e-09,160;UBERON:0006595,7.59e-09,160;UBERON:0000059,3.53e-08,11;UBERON:0005172,1.27e-07,54;UBERON:0005173,1.27e-07,54;UBERON:0002530,6.54e-07,59;UBERON:0002417,8.78e-07,60;UBERON:0000916,8.78e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.786021525498329,0.205601498999509,0,0.32592226663359,0.946895611469467,0,0.111410456885174,1.17842362989935,0.443067789167242,0,0.128091319725675,0.520237390239513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9430538304014,0.982827216677626,6.49868897349544,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97701981631236,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0,0,0,0.79312517629427,0,0,0,0,0,0.355709216742071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.538545866458633,1.3037684630641,0,0,0,0,0,0,0,0,0,0,0,0,0,0.989471500037586,0,3.98104772431402,6.45740220874376,4.27721101453538,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0.114536596165916,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,2.10309883423452,0,0,0,0,0,0,0,0,0,3.70280956843951,2.96697090172199,3.43758073656343,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3707013745959,2.65013777824443,0,0,0.342173675768659,0,0,0,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0.115233987555779,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196300467230486,1.5849330247695,0,0.102662806856247,0,0,0,0,0,0,0,0,10.4185113445725,4.37119121007915,0,0,0.471353094203252,0,0,0,0,0,0.0644578879735772,0.999411559249289,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0.179650404213174,4.69281884806909,0,0,0,0,0 | |||
|short_description=p9@AGPAT3 | |||
}} |
Latest revision as of 17:25, 18 September 2015
Short description: | p9@AGPAT3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_AGPAT3_5end |
Coexpression cluster: | C211_small_Hepatocyte_liver_colon_temporal_duodenum_kidney |
Association with transcript: | -31bp_to_ENST00000448287_5end |
EntrezGene: | AGPAT3 |
HGNC: | 326 |
UniProt: | C9JQX8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.31e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.61e-24 | 17 |
liver | 5.37e-23 | 19 |
digestive gland | 5.37e-23 | 19 |
liver bud | 5.37e-23 | 19 |
hepatic diverticulum | 9.03e-20 | 22 |
liver primordium | 9.03e-20 | 22 |
digestive tract diverticulum | 6.99e-19 | 23 |
epithelial sac | 2.57e-17 | 25 |
epithelium of foregut-midgut junction | 2.57e-17 | 25 |
anatomical boundary | 2.57e-17 | 25 |
hepatobiliary system | 2.57e-17 | 25 |
foregut-midgut junction | 2.57e-17 | 25 |
septum transversum | 2.57e-17 | 25 |
small intestine | 2.90e-17 | 4 |
sac | 1.27e-16 | 26 |
gastrointestinal system | 1.27e-16 | 25 |
exocrine gland | 7.90e-14 | 31 |
exocrine system | 7.90e-14 | 31 |
subdivision of digestive tract | 8.35e-13 | 118 |
endocrine gland | 3.64e-12 | 35 |
digestive system | 5.33e-10 | 145 |
digestive tract | 5.33e-10 | 145 |
primitive gut | 5.33e-10 | 145 |
colon | 6.88e-10 | 9 |
gut epithelium | 7.60e-10 | 54 |
endocrine system | 2.69e-09 | 45 |
endoderm-derived structure | 7.59e-09 | 160 |
endoderm | 7.59e-09 | 160 |
presumptive endoderm | 7.59e-09 | 160 |
large intestine | 3.53e-08 | 11 |
abdomen element | 1.27e-07 | 54 |
abdominal segment element | 1.27e-07 | 54 |
gland | 6.54e-07 | 59 |
abdominal segment of trunk | 8.78e-07 | 60 |
abdomen | 8.78e-07 | 60 |